RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 GTF3C3Q9Y5Q9 886 aa28.47■■■□□ 2.15
HOMER3-201ENST00000221222 CELF2O95319 508 aaKnown RBP28.46■■■□□ 2.15
HOMER3-201ENST00000221222 RASA3Q14644 834 aa28.46■■■□□ 2.15
HOMER3-201ENST00000221222 BMP2KLQ5H9B9 411 aa28.46■■■□□ 2.15
HOMER3-201ENST00000221222 CYP4F22Q6NT55 531 aa28.46■■■□□ 2.15
HOMER3-201ENST00000221222 TEX11Q8IYF3 940 aa28.46■■■□□ 2.15
HOMER3-201ENST00000221222 OSBP2Q969R2 916 aa28.46■■■□□ 2.15
HOMER3-201ENST00000221222 FAM198AQ9UFP1 575 aa28.46■■■□□ 2.15
HOMER3-201ENST00000221222 CAPNS2Q96L46 248 aa28.45■■■□□ 2.14
HOMER3-201ENST00000221222 WBP1LQ9NX94 342 aa28.45■■■□□ 2.14
HOMER3-201ENST00000221222 RPAP1Q9BWH6 1393 aaPredicted RBP28.44■■■□□ 2.14
HOMER3-201ENST00000221222 ENTPD3O75355 529 aa28.44■■■□□ 2.14
HOMER3-201ENST00000221222 MBD4O95243 580 aa28.44■■■□□ 2.14
HOMER3-201ENST00000221222 LCORLQ8N3X6 602 aa28.44■■■□□ 2.14
HOMER3-201ENST00000221222 FAM151AQ8WW52 585 aa28.44■■■□□ 2.14
HOMER3-201ENST00000221222 CTCFP49711 727 aaPredicted RBP28.43■■■□□ 2.14
HOMER3-201ENST00000221222 DDX4Q9NQI0 724 aaKnown RBP28.43■■■□□ 2.14
HOMER3-201ENST00000221222 TLL2Q9Y6L7 1015 aa28.43■■■□□ 2.14
HOMER3-201ENST00000221222 HIP1O00291 1037 aa28.42■■■□□ 2.14
HOMER3-201ENST00000221222 DLK2Q6UY11 383 aa28.42■■■□□ 2.14
HOMER3-201ENST00000221222 CDCA5Q96FF9 252 aa28.42■■■□□ 2.14
HOMER3-201ENST00000221222 TEPSINQ96N21 525 aa28.42■■■□□ 2.14
HOMER3-201ENST00000221222 ARMT1Q9H993 441 aa28.42■■■□□ 2.14
HOMER3-201ENST00000221222 COL2A1P02458 1487 aaPredicted RBP28.41■■■□□ 2.14
HOMER3-201ENST00000221222 TGFBRAP1Q8WUH2 860 aa28.41■■■□□ 2.14
HOMER3-201ENST00000221222 CRNKL1Q9BZJ0 848 aaKnown RBP28.41■■■□□ 2.14
HOMER3-201ENST00000221222 TMEM39BQ9GZU3 492 aa28.41■■■□□ 2.14
HOMER3-201ENST00000221222 HELLSQ9NRZ9 838 aa28.41■■■□□ 2.14
HOMER3-201ENST00000221222 M0R2C6 588 aa28.4■■■□□ 2.14
HOMER3-201ENST00000221222 LBX1P52954 281 aa28.4■■■□□ 2.14
HOMER3-201ENST00000221222 TCP10Q12799 353 aa28.4■■■□□ 2.14
HOMER3-201ENST00000221222 STRBPQ96SI9 672 aaKnown RBP28.4■■■□□ 2.14
HOMER3-201ENST00000221222 SEC62Q99442 399 aaKnown RBP28.4■■■□□ 2.14
HOMER3-201ENST00000221222 DDX60LQ5H9U9 1706 aaKnown RBP28.4■■■□□ 2.14
HOMER3-201ENST00000221222 NAV1Q8NEY1 1877 aa28.39■■■□□ 2.14
HOMER3-201ENST00000221222 GPAA1O43292 621 aa28.39■■■□□ 2.14
HOMER3-201ENST00000221222 ECE1P42892 770 aa28.39■■■□□ 2.14
HOMER3-201ENST00000221222 NMIQ13287 307 aaPredicted RBP28.39■■■□□ 2.14
HOMER3-201ENST00000221222 PICALMQ13492 652 aa28.39■■■□□ 2.14
HOMER3-201ENST00000221222 FAM227BQ96M60 508 aa28.39■■■□□ 2.14
HOMER3-201ENST00000221222 FLT1P17948 1338 aa28.39■■■□□ 2.14
HOMER3-201ENST00000221222 A0A0D9SFI3 127 aa28.38■■■□□ 2.13
HOMER3-201ENST00000221222 AOC2O75106 756 aa28.38■■■□□ 2.13
HOMER3-201ENST00000221222 PRAMEF18Q5VWM3 479 aa28.38■■■□□ 2.13
HOMER3-201ENST00000221222 ZFPM1Q8IX07 1006 aa28.38■■■□□ 2.13
HOMER3-201ENST00000221222 OSBPL5Q9H0X9 879 aaPredicted RBP28.38■■■□□ 2.13
HOMER3-201ENST00000221222 DIAPH3Q9NSV4 1193 aa28.38■■■□□ 2.13
HOMER3-201ENST00000221222 ATRNL1Q5VV63 1379 aa28.38■■■□□ 2.13
HOMER3-201ENST00000221222 MYH1P12882 1939 aa28.38■■■□□ 2.13
HOMER3-201ENST00000221222 USP5P45974 858 aa28.37■■■□□ 2.13
HOMER3-201ENST00000221222 MAP2K1Q02750 393 aaPredicted RBP28.37■■■□□ 2.13
HOMER3-201ENST00000221222 MAPKAPK5Q8IW41 473 aa28.37■■■□□ 2.13
HOMER3-201ENST00000221222 PRDM10Q9NQV6 1147 aa28.37■■■□□ 2.13
HOMER3-201ENST00000221222 THSD7BQ9C0I4 1608 aa28.37■■■□□ 2.13
HOMER3-201ENST00000221222 SUPT20HL1Q3ZLR7 823 aa28.37■■■□□ 2.13
HOMER3-201ENST00000221222 MCMDC2Q4G0Z9 681 aa28.37■■■□□ 2.13
HOMER3-201ENST00000221222 NBPF12Q5TAG4 269 aaPredicted RBP28.37■■■□□ 2.13
HOMER3-201ENST00000221222 SAPCD2Q86UD0 394 aa28.37■■■□□ 2.13
HOMER3-201ENST00000221222 CDAN1Q8IWY9 1227 aa28.37■■■□□ 2.13
HOMER3-201ENST00000221222 SSC5DA1L4H1 1573 aa28.36■■■□□ 2.13
HOMER3-201ENST00000221222 HSPA8P11142 646 aaKnown RBP28.36■■■□□ 2.13
HOMER3-201ENST00000221222 GNAT2P19087 354 aa28.36■■■□□ 2.13
HOMER3-201ENST00000221222 SH3BP5LQ7L8J4 393 aa28.36■■■□□ 2.13
HOMER3-201ENST00000221222 ATP8A2Q9NTI2 1148 aa28.36■■■□□ 2.13
HOMER3-201ENST00000221222 PRKAB2O43741 272 aa28.35■■■□□ 2.13
HOMER3-201ENST00000221222 CHMLP26374 656 aa28.35■■■□□ 2.13
HOMER3-201ENST00000221222 SDR42E1Q8WUS8 393 aa28.35■■■□□ 2.13
HOMER3-201ENST00000221222 SLC4A4Q9Y6R1 1079 aa28.35■■■□□ 2.13
HOMER3-201ENST00000221222 DDTLA6NHG4 134 aaPredicted RBP28.34■■■□□ 2.13
HOMER3-201ENST00000221222 NF2P35240 595 aa28.34■■■□□ 2.13
HOMER3-201ENST00000221222 CWC27Q6UX04 472 aaKnown RBP28.34■■■□□ 2.13
HOMER3-201ENST00000221222 DHX36Q9H2U1 1008 aaKnown RBP28.34■■■□□ 2.13
HOMER3-201ENST00000221222 DCP1AQ9NPI6 582 aaPredicted RBP28.34■■■□□ 2.13
HOMER3-201ENST00000221222 BAZ2AQ9UIF9 1905 aaKnown RBP28.33■■■□□ 2.13
HOMER3-201ENST00000221222 CCDC129Q6ZRS4 1044 aa28.33■■■□□ 2.13
HOMER3-201ENST00000221222 HOOK2Q96ED9 719 aa28.33■■■□□ 2.13
HOMER3-201ENST00000221222 SIPA1L1O43166 1804 aa28.32■■■□□ 2.12
HOMER3-201ENST00000221222 PAPPA2Q9BXP8 1791 aa28.32■■■□□ 2.12
HOMER3-201ENST00000221222 GIMAP6Q6P9H5 292 aa28.32■■■□□ 2.12
HOMER3-201ENST00000221222 ZSCAN29Q8IWY8 852 aaPredicted RBP28.32■■■□□ 2.12
HOMER3-201ENST00000221222 CCDC171Q6TFL3 1326 aa28.31■■■□□ 2.12
HOMER3-201ENST00000221222 RAD50Q92878 1312 aa28.31■■■□□ 2.12
HOMER3-201ENST00000221222 GSG1L2A8MUP6 293 aa28.31■■■□□ 2.12
HOMER3-201ENST00000221222 MFAP1P55081 439 aaKnown RBP28.31■■■□□ 2.12
HOMER3-201ENST00000221222 ZNF589Q86UQ0 364 aaPredicted RBP28.31■■■□□ 2.12
HOMER3-201ENST00000221222 CSRNP1Q96S65 589 aa28.31■■■□□ 2.12
HOMER3-201ENST00000221222 BEGAINQ9BUH8 593 aa28.31■■■□□ 2.12
HOMER3-201ENST00000221222 PATL2C9JE40 543 aaKnown RBP28.3■■■□□ 2.12
HOMER3-201ENST00000221222 RUFY2Q8WXA3 655 aa28.3■■■□□ 2.12
HOMER3-201ENST00000221222 TSKSQ9UJT2 592 aa28.3■■■□□ 2.12
HOMER3-201ENST00000221222 PALD1Q9ULE6 856 aa28.3■■■□□ 2.12
HOMER3-201ENST00000221222 FKBP1BP68106 108 aa28.29■■■□□ 2.12
HOMER3-201ENST00000221222 DDRGK1Q96HY6 314 aa28.29■■■□□ 2.12
HOMER3-201ENST00000221222 SAP30BPQ9UHR5 308 aaKnown RBP28.29■■■□□ 2.12
HOMER3-201ENST00000221222 HUNKP57058 714 aa28.28■■■□□ 2.12
HOMER3-201ENST00000221222 MAP3K10Q02779 954 aa28.28■■■□□ 2.12
HOMER3-201ENST00000221222 GBA2Q9HCG7 927 aaPredicted RBP28.28■■■□□ 2.12
HOMER3-201ENST00000221222 EPB41L4AQ9HCS5 686 aaPredicted RBP28.28■■■□□ 2.12
HOMER3-201ENST00000221222 MCM9Q9NXL9 1143 aa28.28■■■□□ 2.12
HOMER3-201ENST00000221222 PI4KBQ9UBF8 816 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms