RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 CALM3P0DP25 149 aa10.81□□□□□ -0.68
CCDC113-201ENST00000219299 HSPA4P34932 840 aa10.81□□□□□ -0.68
CCDC113-201ENST00000219299 PPARAQ07869 468 aa10.81□□□□□ -0.68
CCDC113-201ENST00000219299 TNFAIP1Q13829 316 aa10.81□□□□□ -0.68
CCDC113-201ENST00000219299 PLS1Q14651 629 aa10.81□□□□□ -0.68
CCDC113-201ENST00000219299 CAGE1Q8TC20 777 aa10.81□□□□□ -0.68
CCDC113-201ENST00000219299 ZMYND15Q9H091 742 aa10.81□□□□□ -0.68
CCDC113-201ENST00000219299 ZNF277Q9NRM2 450 aaPredicted RBP10.81□□□□□ -0.68
CCDC113-201ENST00000219299 UBN2Q6ZU65 1347 aa10.81□□□□□ -0.68
CCDC113-201ENST00000219299 E7EWF7 191 aa10.81□□□□□ -0.68
CCDC113-201ENST00000219299 ERLIN1O75477 346 aa10.81□□□□□ -0.68
CCDC113-201ENST00000219299 PRDX5P30044 214 aa10.81□□□□□ -0.68
CCDC113-201ENST00000219299 TMEM87BQ96K49 555 aa10.81□□□□□ -0.68
CCDC113-201ENST00000219299 NCOA5Q9HCD5 579 aaKnown RBP10.81□□□□□ -0.68
CCDC113-201ENST00000219299 GPCPD1Q9NPB8 672 aa10.81□□□□□ -0.68
CCDC113-201ENST00000219299 RIPOR2Q9Y4F9 1068 aa10.81□□□□□ -0.68
CCDC113-201ENST00000219299 RBM25P49756 843 aaKnown RBP10.8□□□□□ -0.68
CCDC113-201ENST00000219299 ZMYM1Q5SVZ6 1142 aa10.8□□□□□ -0.68
CCDC113-201ENST00000219299 ZNF526Q8TF50 670 aaPredicted RBP10.8□□□□□ -0.68
CCDC113-201ENST00000219299 OSBP2Q969R2 916 aa10.8□□□□□ -0.68
CCDC113-201ENST00000219299 PIH1D3Q9NQM4 214 aaKnown RBP10.8□□□□□ -0.68
CCDC113-201ENST00000219299 USP17L3A6NCW0 530 aa10.8□□□□□ -0.68
CCDC113-201ENST00000219299 USP17L4A6NCW7 530 aa10.8□□□□□ -0.68
CCDC113-201ENST00000219299 NAPAP54920 295 aa10.8□□□□□ -0.68
CCDC113-201ENST00000219299 POTEAQ6S8J7 498 aa10.8□□□□□ -0.68
CCDC113-201ENST00000219299 USP17L1Q7RTZ2 530 aa10.8□□□□□ -0.68
CCDC113-201ENST00000219299 TNMDQ9H2S6 317 aa10.8□□□□□ -0.68
CCDC113-201ENST00000219299 AOC3Q16853 763 aa10.8□□□□□ -0.68
CCDC113-201ENST00000219299 SLFNL1Q499Z3 407 aa10.8□□□□□ -0.68
CCDC113-201ENST00000219299 CIAPIN1Q6FI81 312 aa10.8□□□□□ -0.68
CCDC113-201ENST00000219299 ZNF589Q86UQ0 364 aaPredicted RBP10.8□□□□□ -0.68
CCDC113-201ENST00000219299 PI4K2BQ8TCG2 481 aa10.8□□□□□ -0.68
CCDC113-201ENST00000219299 SLC16A10Q8TF71 515 aa10.8□□□□□ -0.68
CCDC113-201ENST00000219299 PUS7LQ9H0K6 701 aaKnown RBP10.8□□□□□ -0.68
CCDC113-201ENST00000219299 MYCNP04198 464 aaPredicted RBP10.8□□□□□ -0.68
CCDC113-201ENST00000219299 ADD2P35612 726 aa10.8□□□□□ -0.68
CCDC113-201ENST00000219299 GPSM2P81274 684 aa10.8□□□□□ -0.68
CCDC113-201ENST00000219299 PLA2G12BQ9BX93 195 aa10.8□□□□□ -0.68
CCDC113-201ENST00000219299 ARPP21Q9UBL0 812 aaPredicted RBP10.8□□□□□ -0.68
CCDC113-201ENST00000219299 PALD1Q9ULE6 856 aa10.8□□□□□ -0.68
CCDC113-201ENST00000219299 PRKAB2O43741 272 aa10.79□□□□□ -0.68
CCDC113-201ENST00000219299 TNPO1Q92973 898 aaKnown RBP10.79□□□□□ -0.68
CCDC113-201ENST00000219299 DEF6Q9H4E7 631 aa10.79□□□□□ -0.68
CCDC113-201ENST00000219299 RTL9Q8NET4 1388 aa10.79□□□□□ -0.68
CCDC113-201ENST00000219299 PTPDC1A2A3K4 754 aa10.79□□□□□ -0.68
CCDC113-201ENST00000219299 CSF1RP07333 972 aa10.79□□□□□ -0.68
CCDC113-201ENST00000219299 TMEM132AQ24JP5 1023 aa10.79□□□□□ -0.68
CCDC113-201ENST00000219299 ATG9AQ7Z3C6 839 aa10.79□□□□□ -0.68
CCDC113-201ENST00000219299 SMARCE1Q969G3 411 aa10.79□□□□□ -0.68
CCDC113-201ENST00000219299 PANK2Q9BZ23 570 aa10.79□□□□□ -0.68
CCDC113-201ENST00000219299 PARP1P09874 1014 aaKnown RBP10.79□□□□□ -0.68
CCDC113-201ENST00000219299 AXDND1Q5T1B0 1012 aaPredicted RBP10.79□□□□□ -0.68
CCDC113-201ENST00000219299 SULF1Q8IWU6 871 aa10.79□□□□□ -0.68
CCDC113-201ENST00000219299 BMP2KQ9NSY1 1161 aaPredicted RBP10.79□□□□□ -0.68
CCDC113-201ENST00000219299 FMN2Q9NZ56 1722 aa10.79□□□□□ -0.68
CCDC113-201ENST00000219299 MECOMQ03112 1051 aa10.79□□□□□ -0.68
CCDC113-201ENST00000219299 PODNQ7Z5L7 613 aa10.79□□□□□ -0.68
CCDC113-201ENST00000219299 SP8Q8IXZ3 490 aa10.79□□□□□ -0.68
CCDC113-201ENST00000219299 SNX21Q969T3 373 aa10.79□□□□□ -0.68
CCDC113-201ENST00000219299 MYOM1P52179 1685 aa10.79□□□□□ -0.68
CCDC113-201ENST00000219299 KIAA0754O94854 1291 aa10.78□□□□□ -0.68
CCDC113-201ENST00000219299 CYP2E1P05181 493 aaPredicted RBP10.78□□□□□ -0.68
CCDC113-201ENST00000219299 SLC1A4P43007 532 aa10.78□□□□□ -0.68
CCDC113-201ENST00000219299 ARHGEF10LQ9HCE6 1279 aa10.78□□□□□ -0.68
CCDC113-201ENST00000219299 CLIP2Q9UDT6 1046 aa10.78□□□□□ -0.68
CCDC113-201ENST00000219299 NAP1L1P55209 391 aaKnown RBP10.78□□□□□ -0.68
CCDC113-201ENST00000219299 FAM84BQ96KN1 310 aaPredicted RBP10.78□□□□□ -0.68
CCDC113-201ENST00000219299 SH2D4AQ9H788 454 aa10.78□□□□□ -0.68
CCDC113-201ENST00000219299 ATP8A2Q9NTI2 1148 aa10.78□□□□□ -0.68
CCDC113-201ENST00000219299 PLSCR1O15162 318 aa10.78□□□□□ -0.68
CCDC113-201ENST00000219299 LCORLQ8N3X6 602 aa10.78□□□□□ -0.68
CCDC113-201ENST00000219299 RRP36Q96EU6 259 aaKnown RBP10.78□□□□□ -0.68
CCDC113-201ENST00000219299 CALCOCO1Q9P1Z2 691 aa10.78□□□□□ -0.68
CCDC113-201ENST00000219299 KIF2AO00139 706 aaPredicted RBP10.78□□□□□ -0.68
CCDC113-201ENST00000219299 CCDC148Q8NFR7 591 aa10.78□□□□□ -0.68
CCDC113-201ENST00000219299 CRAMP1Q96RY5 1269 aa10.78□□□□□ -0.68
CCDC113-201ENST00000219299 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.78□□□□□ -0.68
CCDC113-201ENST00000219299 CBX1P83916 185 aa10.78□□□□□ -0.68
CCDC113-201ENST00000219299 TRAF1Q13077 416 aa10.78□□□□□ -0.68
CCDC113-201ENST00000219299 SCARF1Q14162 830 aa10.78□□□□□ -0.68
CCDC113-201ENST00000219299 FILIP1LQ4L180 1135 aa10.78□□□□□ -0.68
CCDC113-201ENST00000219299 CCDC125Q86Z20 511 aa10.78□□□□□ -0.68
CCDC113-201ENST00000219299 HOOK2Q96ED9 719 aa10.78□□□□□ -0.68
CCDC113-201ENST00000219299 WWC2Q6AWC2 1192 aa10.77□□□□□ -0.68
CCDC113-201ENST00000219299 V9GY48 417 aaPredicted RBP10.77□□□□□ -0.68
CCDC113-201ENST00000219299 CACNB3P54284 484 aa10.77□□□□□ -0.69
CCDC113-201ENST00000219299 USP48Q86UV5 1035 aa10.77□□□□□ -0.69
CCDC113-201ENST00000219299 RASEFQ8IZ41 740 aa10.77□□□□□ -0.69
CCDC113-201ENST00000219299 MAP4K1Q92918 833 aa10.77□□□□□ -0.69
CCDC113-201ENST00000219299 CAMK4Q16566 473 aa10.77□□□□□ -0.69
CCDC113-201ENST00000219299 DCPSQ96C86 337 aaKnown RBP10.77□□□□□ -0.69
CCDC113-201ENST00000219299 CSRNP1Q96S65 589 aa10.77□□□□□ -0.69
CCDC113-201ENST00000219299 RAB34Q9BZG1 259 aa10.77□□□□□ -0.69
CCDC113-201ENST00000219299 PRDM10Q9NQV6 1147 aa10.77□□□□□ -0.69
CCDC113-201ENST00000219299 LRRC4BQ9NT99 713 aa10.77□□□□□ -0.69
CCDC113-201ENST00000219299 RBM27Q9P2N5 1060 aaKnown RBP10.77□□□□□ -0.69
CCDC113-201ENST00000219299 CHD2O14647 1828 aaKnown RBP10.77□□□□□ -0.69
CCDC113-201ENST00000219299 M0R2C6 588 aa10.77□□□□□ -0.69
CCDC113-201ENST00000219299 USP17L8P0C7I0 530 aa10.77□□□□□ -0.69
CCDC113-201ENST00000219299 ZSCAN22P10073 491 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms