RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 SLC4A8Q2Y0W8 1093 aa32.58■■■□□ 2.81
CHMP4B-201ENST00000217402 FKBP1CQ5VVH2 108 aa32.58■■■□□ 2.81
CHMP4B-201ENST00000217402 ZFPM1Q8IX07 1006 aa32.58■■■□□ 2.81
CHMP4B-201ENST00000217402 IFNL3Q8IZI9 196 aa32.58■■■□□ 2.81
CHMP4B-201ENST00000217402 ZC3H15Q8WU90 426 aaKnown RBP32.58■■■□□ 2.81
CHMP4B-201ENST00000217402 DCPSQ96C86 337 aaKnown RBP32.58■■■□□ 2.81
CHMP4B-201ENST00000217402 NACAP1Q9BZK3 213 aa32.58■■■□□ 2.81
CHMP4B-201ENST00000217402 LSG1Q9H089 658 aaKnown RBP32.58■■■□□ 2.81
CHMP4B-201ENST00000217402 NAV1Q8NEY1 1877 aa32.57■■■□□ 2.8
CHMP4B-201ENST00000217402 TNFAIP1Q13829 316 aa32.57■■■□□ 2.8
CHMP4B-201ENST00000217402 DSCC1Q9BVC3 393 aa32.57■■■□□ 2.8
CHMP4B-201ENST00000217402 OSBPL5Q9H0X9 879 aaPredicted RBP32.57■■■□□ 2.8
CHMP4B-201ENST00000217402 MCM9Q9NXL9 1143 aa32.57■■■□□ 2.8
CHMP4B-201ENST00000217402 MKRN1Q9UHC7 482 aaKnown RBP32.57■■■□□ 2.8
CHMP4B-201ENST00000217402 PITPNM2Q9BZ72 1349 aa32.56■■■□□ 2.8
CHMP4B-201ENST00000217402 REC8O95072 547 aa32.56■■■□□ 2.8
CHMP4B-201ENST00000217402 NAPBQ9H115 298 aa32.56■■■□□ 2.8
CHMP4B-201ENST00000217402 RPAP1Q9BWH6 1393 aaPredicted RBP32.56■■■□□ 2.8
CHMP4B-201ENST00000217402 ENTPD3O75355 529 aa32.55■■■□□ 2.8
CHMP4B-201ENST00000217402 SEC24BO95487 1268 aa32.55■■■□□ 2.8
CHMP4B-201ENST00000217402 TNNI2P48788 182 aa32.55■■■□□ 2.8
CHMP4B-201ENST00000217402 RASA3Q14644 834 aa32.55■■■□□ 2.8
CHMP4B-201ENST00000217402 TMEM39BQ9GZU3 492 aa32.55■■■□□ 2.8
CHMP4B-201ENST00000217402 NPM3O75607 178 aaKnown RBP32.54■■■□□ 2.8
CHMP4B-201ENST00000217402 GIMAP6Q6P9H5 292 aa32.54■■■□□ 2.8
CHMP4B-201ENST00000217402 FAM83AQ86UY5 434 aa32.54■■■□□ 2.8
CHMP4B-201ENST00000217402 ZSCAN29Q8IWY8 852 aaPredicted RBP32.54■■■□□ 2.8
CHMP4B-201ENST00000217402 DEFB129Q9H1M3 183 aa32.54■■■□□ 2.8
CHMP4B-201ENST00000217402 PGAP2Q9UHJ9 254 aa32.54■■■□□ 2.8
CHMP4B-201ENST00000217402 PALD1Q9ULE6 856 aa32.54■■■□□ 2.8
CHMP4B-201ENST00000217402 FGAP02671 866 aa32.53■■■□□ 2.8
CHMP4B-201ENST00000217402 LDHDQ86WU2 507 aa32.53■■■□□ 2.8
CHMP4B-201ENST00000217402 SULF1Q8IWU6 871 aa32.53■■■□□ 2.8
CHMP4B-201ENST00000217402 FAM151AQ8WW52 585 aa32.53■■■□□ 2.8
CHMP4B-201ENST00000217402 DDX60LQ5H9U9 1706 aaKnown RBP32.53■■■□□ 2.8
CHMP4B-201ENST00000217402 BAZ2AQ9UIF9 1905 aaKnown RBP32.53■■■□□ 2.8
CHMP4B-201ENST00000217402 ADM5C9JUS6 153 aa32.52■■■□□ 2.8
CHMP4B-201ENST00000217402 KRT26Q7Z3Y9 468 aa32.52■■■□□ 2.8
CHMP4B-201ENST00000217402 CYP2D7A0A087X1C5 515 aa32.51■■■□□ 2.8
CHMP4B-201ENST00000217402 USP17L12C9JPN9 530 aa32.51■■■□□ 2.8
CHMP4B-201ENST00000217402 USP17L21D6R901 530 aa32.51■■■□□ 2.8
CHMP4B-201ENST00000217402 MAP1SQ66K74 1059 aaPredicted RBP32.51■■■□□ 2.8
CHMP4B-201ENST00000217402 MAP4K1Q92918 833 aa32.51■■■□□ 2.8
CHMP4B-201ENST00000217402 POLR3DP05423 398 aaPredicted RBP32.51■■■□□ 2.79
CHMP4B-201ENST00000217402 CYP2D6P10635 497 aa32.51■■■□□ 2.79
CHMP4B-201ENST00000217402 ALX1Q15699 326 aa32.51■■■□□ 2.79
CHMP4B-201ENST00000217402 CTR9Q6PD62 1173 aa32.51■■■□□ 2.79
CHMP4B-201ENST00000217402 SH3BP5LQ7L8J4 393 aa32.51■■■□□ 2.79
CHMP4B-201ENST00000217402 CDAN1Q8IWY9 1227 aa32.51■■■□□ 2.79
CHMP4B-201ENST00000217402 ZNF784Q8NCA9 323 aaPredicted RBP32.51■■■□□ 2.79
CHMP4B-201ENST00000217402 ARPP21Q9UBL0 812 aaPredicted RBP32.51■■■□□ 2.79
CHMP4B-201ENST00000217402 RBM8AQ9Y5S9 174 aaKnown RBP32.51■■■□□ 2.79
CHMP4B-201ENST00000217402 DDTLA6NHG4 134 aaPredicted RBP32.5■■■□□ 2.79
CHMP4B-201ENST00000217402 EVX2Q03828 476 aa32.5■■■□□ 2.79
CHMP4B-201ENST00000217402 U3KPZ7 1027 aaPredicted RBP32.5■■■□□ 2.79
CHMP4B-201ENST00000217402 MINDY4BA8MYZ0 360 aa32.49■■■□□ 2.79
CHMP4B-201ENST00000217402 PRAMEF18Q5VWM3 479 aa32.49■■■□□ 2.79
CHMP4B-201ENST00000217402 DLK2Q6UY11 383 aa32.49■■■□□ 2.79
CHMP4B-201ENST00000217402 USP48Q86UV5 1035 aa32.49■■■□□ 2.79
CHMP4B-201ENST00000217402 GLIS2Q9BZE0 524 aaPredicted RBP32.49■■■□□ 2.79
CHMP4B-201ENST00000217402 MYH1P12882 1939 aa32.49■■■□□ 2.79
CHMP4B-201ENST00000217402 ZMYM6O95789 1325 aa32.49■■■□□ 2.79
CHMP4B-201ENST00000217402 KIF3CO14782 793 aa32.48■■■□□ 2.79
CHMP4B-201ENST00000217402 AMOTL1Q8IY63 956 aa32.48■■■□□ 2.79
CHMP4B-201ENST00000217402 BACH2Q9BYV9 841 aa32.48■■■□□ 2.79
CHMP4B-201ENST00000217402 POLR2AP24928 1970 aaKnown RBP32.48■■■□□ 2.79
CHMP4B-201ENST00000217402 CSRNP1Q96S65 589 aa32.48■■■□□ 2.79
CHMP4B-201ENST00000217402 COL2A1P02458 1487 aaPredicted RBP32.47■■■□□ 2.79
CHMP4B-201ENST00000217402 ATRNL1Q5VV63 1379 aa32.47■■■□□ 2.79
CHMP4B-201ENST00000217402 SMIM22K7EJ46 135 aa32.47■■■□□ 2.79
CHMP4B-201ENST00000217402 EIF5BO60841 1220 aaKnown RBP32.47■■■□□ 2.79
CHMP4B-201ENST00000217402 HAND2P61296 217 aa32.47■■■□□ 2.79
CHMP4B-201ENST00000217402 DHX36Q9H2U1 1008 aaKnown RBP32.47■■■□□ 2.79
CHMP4B-201ENST00000217402 CTNNA3Q9UI47 895 aa32.47■■■□□ 2.79
CHMP4B-201ENST00000217402 PPP2R3BQ9Y5P8 575 aa32.47■■■□□ 2.79
CHMP4B-201ENST00000217402 PLCD1P51178 756 aa32.46■■■□□ 2.79
CHMP4B-201ENST00000217402 CDC37L1Q7L3B6 337 aa32.46■■■□□ 2.79
CHMP4B-201ENST00000217402 TEPSINQ96N21 525 aa32.46■■■□□ 2.79
CHMP4B-201ENST00000217402 HLA-DOAP06340 250 aa32.45■■■□□ 2.79
CHMP4B-201ENST00000217402 SBK1Q52WX2 424 aa32.45■■■□□ 2.79
CHMP4B-201ENST00000217402 C12orf60Q5U649 245 aa32.45■■■□□ 2.79
CHMP4B-201ENST00000217402 PPARAQ07869 468 aa32.44■■■□□ 2.78
CHMP4B-201ENST00000217402 TTC6Q86TZ1 520 aa32.44■■■□□ 2.78
CHMP4B-201ENST00000217402 STK11IPQ8N1F8 1099 aa32.44■■■□□ 2.78
CHMP4B-201ENST00000217402 USP26Q9BXU7 913 aa32.44■■■□□ 2.78
CHMP4B-201ENST00000217402 LAMB1P07942 1786 aa32.44■■■□□ 2.78
CHMP4B-201ENST00000217402 CHADLQ6NUI6 762 aa32.44■■■□□ 2.78
CHMP4B-201ENST00000217402 IMMTQ16891 758 aaKnown RBP32.43■■■□□ 2.78
CHMP4B-201ENST00000217402 NBPF12Q5TAG4 269 aaPredicted RBP32.43■■■□□ 2.78
CHMP4B-201ENST00000217402 ZNF213O14771 459 aa32.42■■■□□ 2.78
CHMP4B-201ENST00000217402 SLURP2P0DP57 97 aa32.42■■■□□ 2.78
CHMP4B-201ENST00000217402 CTDSPL2Q05D32 466 aa32.42■■■□□ 2.78
CHMP4B-201ENST00000217402 PI4KBQ9UBF8 816 aa32.42■■■□□ 2.78
CHMP4B-201ENST00000217402 DYNLL2Q96FJ2 89 aa32.41■■■□□ 2.78
CHMP4B-201ENST00000217402 TRAF5O00463 557 aa32.4■■■□□ 2.78
CHMP4B-201ENST00000217402 CYP21A2P08686 494 aa32.4■■■□□ 2.78
CHMP4B-201ENST00000217402 NECTIN1Q15223 517 aa32.4■■■□□ 2.78
CHMP4B-201ENST00000217402 CREB3L3Q68CJ9 461 aa32.4■■■□□ 2.78
CHMP4B-201ENST00000217402 CDCA5Q96FF9 252 aa32.4■■■□□ 2.78
CHMP4B-201ENST00000217402 FAM196BA6NMK8 535 aa32.4■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms