RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 PATL2C9JE40 543 aaKnown RBP15.33■□□□□ 0.04
SRP54-201ENST00000216774 FMNL1O95466 1100 aaPredicted RBP15.33■□□□□ 0.04
SRP54-201ENST00000216774 ATP1A3P13637 1013 aa15.33■□□□□ 0.04
SRP54-201ENST00000216774 RXRAP19793 462 aa15.33■□□□□ 0.04
SRP54-201ENST00000216774 GPTP24298 496 aa15.33■□□□□ 0.04
SRP54-201ENST00000216774 PHKA1P46020 1223 aa15.33■□□□□ 0.04
SRP54-201ENST00000216774 UBASH3AP57075 661 aa15.33■□□□□ 0.04
SRP54-201ENST00000216774 PNOCQ13519 176 aa15.33■□□□□ 0.04
SRP54-201ENST00000216774 KMT5BQ4FZB7 885 aa15.33■□□□□ 0.04
SRP54-201ENST00000216774 KRBA2Q6ZNG9 492 aa15.33■□□□□ 0.04
SRP54-201ENST00000216774 SENP2Q9HC62 589 aa15.33■□□□□ 0.04
SRP54-201ENST00000216774 HOOK1Q9UJC3 728 aaKnown RBP15.33■□□□□ 0.04
SRP54-201ENST00000216774 WWC3Q9ULE0 1092 aa15.33■□□□□ 0.04
SRP54-201ENST00000216774 SLC12A7Q9Y666 1083 aa15.33■□□□□ 0.04
SRP54-201ENST00000216774 MROH5Q6ZUA9 1318 aa15.33■□□□□ 0.04
SRP54-201ENST00000216774 TIAM2Q8IVF5 1701 aa15.32■□□□□ 0.04
SRP54-201ENST00000216774 PDE8AO60658 829 aa15.32■□□□□ 0.04
SRP54-201ENST00000216774 KIF20AO95235 890 aa15.32■□□□□ 0.04
SRP54-201ENST00000216774 SSRP1Q08945 709 aaKnown RBP15.32■□□□□ 0.04
SRP54-201ENST00000216774 CCDC93Q567U6 631 aa15.32■□□□□ 0.04
SRP54-201ENST00000216774 METTL16Q86W50 562 aaKnown RBP15.32■□□□□ 0.04
SRP54-201ENST00000216774 KRI1Q8N9T8 703 aaKnown RBP15.32■□□□□ 0.04
SRP54-201ENST00000216774 TMX1Q9H3N1 280 aa15.32■□□□□ 0.04
SRP54-201ENST00000216774 KCNH3Q9ULD8 1083 aa15.32■□□□□ 0.04
SRP54-201ENST00000216774 SERPINC1P01008 464 aa15.32■□□□□ 0.04
SRP54-201ENST00000216774 IFNAR1P17181 557 aa15.32■□□□□ 0.04
SRP54-201ENST00000216774 EVA1CP58658 441 aa15.32■□□□□ 0.04
SRP54-201ENST00000216774 GABPB1Q06547 395 aaPredicted RBP15.32■□□□□ 0.04
SRP54-201ENST00000216774 FCHSD1Q86WN1 690 aa15.32■□□□□ 0.04
SRP54-201ENST00000216774 NOSTRINQ8IVI9 506 aa15.32■□□□□ 0.04
SRP54-201ENST00000216774 KRT23Q9C075 422 aa15.32■□□□□ 0.04
SRP54-201ENST00000216774 STRN4Q9NRL3 753 aa15.32■□□□□ 0.04
SRP54-201ENST00000216774 TRMT112Q9UI30 125 aaKnown RBP15.32■□□□□ 0.04
SRP54-201ENST00000216774 FGFR2P21802 821 aa15.31■□□□□ 0.04
SRP54-201ENST00000216774 ELF2Q15723 593 aa15.31■□□□□ 0.04
SRP54-201ENST00000216774 ISM2Q6H9L7 571 aa15.31■□□□□ 0.04
SRP54-201ENST00000216774 VSTM4Q8IW00 320 aa15.31■□□□□ 0.04
SRP54-201ENST00000216774 CNNM3Q8NE01 707 aa15.31■□□□□ 0.04
SRP54-201ENST00000216774 AK7Q96M32 723 aa15.31■□□□□ 0.04
SRP54-201ENST00000216774 CLIC6Q96NY7 704 aa15.31■□□□□ 0.04
SRP54-201ENST00000216774 NAPBQ9H115 298 aa15.31■□□□□ 0.04
SRP54-201ENST00000216774 PHLPP2Q6ZVD8 1323 aa15.31■□□□□ 0.04
SRP54-201ENST00000216774 XIRP1Q702N8 1843 aaKnown RBP15.31■□□□□ 0.04
SRP54-201ENST00000216774 IFIT3O14879 490 aaKnown RBP15.31■□□□□ 0.04
SRP54-201ENST00000216774 ETF1P62495 437 aaKnown RBP15.31■□□□□ 0.04
SRP54-201ENST00000216774 MAP3K12Q12852 859 aa15.31■□□□□ 0.04
SRP54-201ENST00000216774 LONRF3Q496Y0 759 aa15.31■□□□□ 0.04
SRP54-201ENST00000216774 SYT10Q6XYQ8 523 aa15.31■□□□□ 0.04
SRP54-201ENST00000216774 IFNL3Q8IZI9 196 aa15.31■□□□□ 0.04
SRP54-201ENST00000216774 SPATA5Q8NB90 893 aa15.31■□□□□ 0.04
SRP54-201ENST00000216774 NOL10Q9BSC4 688 aaKnown RBP15.31■□□□□ 0.04
SRP54-201ENST00000216774 SLC26A6Q9BXS9 759 aa15.31■□□□□ 0.04
SRP54-201ENST00000216774 EPB41L4AQ9HCS5 686 aaPredicted RBP15.31■□□□□ 0.04
SRP54-201ENST00000216774 ZSWIM5Q9P217 1185 aa15.31■□□□□ 0.04
SRP54-201ENST00000216774 MYO5AQ9Y4I1 1855 aaKnown RBP15.3■□□□□ 0.04
SRP54-201ENST00000216774 ERVV-1B6SEH8 477 aa15.3■□□□□ 0.04
SRP54-201ENST00000216774 SAFBQ15424 915 aaKnown RBP eCLIP15.3■□□□□ 0.04
SRP54-201ENST00000216774 CFAP100Q494V2 611 aa15.3■□□□□ 0.04
SRP54-201ENST00000216774 AKNAD1Q5T1N1 836 aa15.3■□□□□ 0.04
SRP54-201ENST00000216774 FBXO38Q6PIJ6 1188 aa15.3■□□□□ 0.04
SRP54-201ENST00000216774 MTA3Q9BTC8 594 aa15.3■□□□□ 0.04
SRP54-201ENST00000216774 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.3■□□□□ 0.04
SRP54-201ENST00000216774 DOCK2Q92608 1830 aa15.3■□□□□ 0.04
SRP54-201ENST00000216774 MMP1P03956 469 aa15.29■□□□□ 0.04
SRP54-201ENST00000216774 CYP19A1P11511 503 aaPredicted RBP15.29■□□□□ 0.04
SRP54-201ENST00000216774 MDM2Q00987 491 aaPredicted RBP15.29■□□□□ 0.04
SRP54-201ENST00000216774 KRT222Q8N1A0 295 aa15.29■□□□□ 0.04
SRP54-201ENST00000216774 FOXP1Q9H334 677 aaPredicted RBP15.29■□□□□ 0.04
SRP54-201ENST00000216774 FAM53CQ9NYF3 392 aa15.29■□□□□ 0.04
SRP54-201ENST00000216774 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.29■□□□□ 0.04
SRP54-201ENST00000216774 PCDHA5Q9Y5H7 936 aa15.29■□□□□ 0.04
SRP54-201ENST00000216774 V9GYY5 206 aaPredicted RBP15.29■□□□□ 0.04
SRP54-201ENST00000216774 MBD4O95243 580 aa15.29■□□□□ 0.04
SRP54-201ENST00000216774 SLC5A1P13866 664 aa15.29■□□□□ 0.04
SRP54-201ENST00000216774 GNAT2P19087 354 aa15.29■□□□□ 0.04
SRP54-201ENST00000216774 RCAN1P53805 252 aa15.29■□□□□ 0.04
SRP54-201ENST00000216774 SART3Q15020 963 aaKnown RBP15.29■□□□□ 0.04
SRP54-201ENST00000216774 FOXP4Q8IVH2 680 aaPredicted RBP15.29■□□□□ 0.04
SRP54-201ENST00000216774 TRIM22Q8IYM9 498 aa15.29■□□□□ 0.04
SRP54-201ENST00000216774 DPF2Q92785 391 aa15.29■□□□□ 0.04
SRP54-201ENST00000216774 MYL10Q9BUA6 226 aa15.29■□□□□ 0.04
SRP54-201ENST00000216774 TOP1P11387 765 aaKnown RBP15.28■□□□□ 0.04
SRP54-201ENST00000216774 RILPL1Q5EBL4 403 aa15.28■□□□□ 0.04
SRP54-201ENST00000216774 NT5DC1Q5TFE4 455 aa15.28■□□□□ 0.04
SRP54-201ENST00000216774 MFSD6Q6ZSS7 791 aa15.28■□□□□ 0.04
SRP54-201ENST00000216774 HOMER1Q86YM7 354 aa15.28■□□□□ 0.04
SRP54-201ENST00000216774 STK11IPQ8N1F8 1099 aa15.28■□□□□ 0.04
SRP54-201ENST00000216774 MAGEB6Q8N7X4 407 aa15.28■□□□□ 0.04
SRP54-201ENST00000216774 ZNF579Q8NAF0 562 aaKnown RBP15.28■□□□□ 0.04
SRP54-201ENST00000216774 FANCLQ9NW38 375 aa15.28■□□□□ 0.04
SRP54-201ENST00000216774 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.28■□□□□ 0.043e-7■■■□□ 16.5
SRP54-201ENST00000216774 CHD4Q14839 1912 aa15.28■□□□□ 0.04
SRP54-201ENST00000216774 CTDSPL2Q05D32 466 aa15.28■□□□□ 0.04
SRP54-201ENST00000216774 TMTC2Q8N394 836 aa15.28■□□□□ 0.04
SRP54-201ENST00000216774 MLKLQ8NB16 471 aa15.28■□□□□ 0.04
SRP54-201ENST00000216774 STAG1Q8WVM7 1258 aa15.28■□□□□ 0.04
SRP54-201ENST00000216774 SRRTQ9BXP5 876 aaKnown RBP15.28■□□□□ 0.04
SRP54-201ENST00000216774 NACAP1Q9BZK3 213 aa15.28■□□□□ 0.04
SRP54-201ENST00000216774 DACH1Q9UI36 760 aa15.28■□□□□ 0.04
SRP54-201ENST00000216774 BCL9O00512 1426 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms