RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 DISC1Q9NRI5 854 aa5.69□□□□□ -1.5
CDKN3-201ENST00000216414 GPN3Q9UHW5 284 aaPredicted RBP5.69□□□□□ -1.5
CDKN3-201ENST00000216414 U3KQE9 123 aa5.69□□□□□ -1.5
CDKN3-201ENST00000216414 KRTAP9-7A8MTY7 169 aa5.68□□□□□ -1.5
CDKN3-201ENST00000216414 GSTP1P09211 210 aaKnown RBP5.68□□□□□ -1.5
CDKN3-201ENST00000216414 ITIH2P19823 946 aa5.68□□□□□ -1.5
CDKN3-201ENST00000216414 KIF4BQ2VIQ3 1234 aa5.68□□□□□ -1.5
CDKN3-201ENST00000216414 RPS26P11Q5JNZ5 115 aaPredicted RBP5.68□□□□□ -1.5
CDKN3-201ENST00000216414 LCE5AQ5TCM9 118 aa5.68□□□□□ -1.5
CDKN3-201ENST00000216414 PRPF40BQ6NWY9 871 aaKnown RBP5.68□□□□□ -1.5
CDKN3-201ENST00000216414 LILRA6Q6PI73 481 aa5.68□□□□□ -1.5
CDKN3-201ENST00000216414 DUSP23Q9BVJ7 150 aa5.68□□□□□ -1.5
CDKN3-201ENST00000216414 PCOLCE2Q9UKZ9 415 aa5.68□□□□□ -1.5
CDKN3-201ENST00000216414 TRAK1Q9UPV9 953 aa5.68□□□□□ -1.5
CDKN3-201ENST00000216414 EIF1AYO14602 144 aaKnown RBP5.67□□□□□ -1.5
CDKN3-201ENST00000216414 OXCT1P55809 520 aa5.67□□□□□ -1.5
CDKN3-201ENST00000216414 ANGEL2Q5VTE6 544 aaKnown RBP5.67□□□□□ -1.5
CDKN3-201ENST00000216414 DTHD1Q6ZMT9 781 aa5.67□□□□□ -1.5
CDKN3-201ENST00000216414 TOP6BLQ8N6T0 577 aa5.67□□□□□ -1.5
CDKN3-201ENST00000216414 ZSCAN18Q8TBC5 510 aaPredicted RBP5.67□□□□□ -1.5
CDKN3-201ENST00000216414 FAM129BQ96TA1 746 aa5.67□□□□□ -1.5
CDKN3-201ENST00000216414 NIF3L1Q9GZT8 377 aa5.67□□□□□ -1.5
CDKN3-201ENST00000216414 KRT82Q9NSB4 513 aa5.67□□□□□ -1.5
CDKN3-201ENST00000216414 PCDHGC5Q9Y5F6 944 aa5.67□□□□□ -1.5
CDKN3-201ENST00000216414 TMEM265A0A087WTH1 108 aa5.66□□□□□ -1.5
CDKN3-201ENST00000216414 B8ZZF3 427 aa5.66□□□□□ -1.5
CDKN3-201ENST00000216414 PRRG2O14669 202 aa5.66□□□□□ -1.5
CDKN3-201ENST00000216414 RAP1GAPP47736 663 aa5.66□□□□□ -1.5
CDKN3-201ENST00000216414 FCGRTP55899 365 aa5.66□□□□□ -1.5
CDKN3-201ENST00000216414 ARHGAP4P98171 946 aa5.66□□□□□ -1.5
CDKN3-201ENST00000216414 PPP2R3AQ06190 1150 aa5.66□□□□□ -1.5
CDKN3-201ENST00000216414 GRM2Q14416 872 aa5.66□□□□□ -1.5
CDKN3-201ENST00000216414 ECM1Q16610 540 aa5.66□□□□□ -1.5
CDKN3-201ENST00000216414 B4GALNT3Q6L9W6 998 aa5.66□□□□□ -1.5
CDKN3-201ENST00000216414 DNAJC25Q9H1X3 360 aa5.66□□□□□ -1.5
CDKN3-201ENST00000216414 MKNK2Q9HBH9 465 aa5.66□□□□□ -1.5
CDKN3-201ENST00000216414 FAM53CQ9NYF3 392 aa5.66□□□□□ -1.5
CDKN3-201ENST00000216414 LRRC10BA6NIK2 292 aa5.65□□□□□ -1.5
CDKN3-201ENST00000216414 GPR182O15218 404 aa5.65□□□□□ -1.5
CDKN3-201ENST00000216414 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.65□□□□□ -1.5
CDKN3-201ENST00000216414 ISL2Q96A47 359 aa5.65□□□□□ -1.5
CDKN3-201ENST00000216414 PRDM7Q9NQW5 492 aa5.65□□□□□ -1.5
CDKN3-201ENST00000216414 PLAGL2Q9UPG8 496 aa5.65□□□□□ -1.5
CDKN3-201ENST00000216414 NCANO14594 1321 aa5.65□□□□□ -1.51
CDKN3-201ENST00000216414 NEFMP07197 916 aa5.64□□□□□ -1.51
CDKN3-201ENST00000216414 SLC23A3Q6PIS1 610 aa5.64□□□□□ -1.51
CDKN3-201ENST00000216414 EPS8L3Q8TE67 593 aaKnown RBP5.64□□□□□ -1.51
CDKN3-201ENST00000216414 TMEM39AQ9NV64 488 aa5.64□□□□□ -1.51
CDKN3-201ENST00000216414 MESP2Q0VG99 397 aa5.63□□□□□ -1.51
CDKN3-201ENST00000216414 IKZF1Q13422 519 aa5.63□□□□□ -1.51
CDKN3-201ENST00000216414 MAP1SQ66K74 1059 aaPredicted RBP5.63□□□□□ -1.51
CDKN3-201ENST00000216414 PDZD3Q86UT5 571 aa5.63□□□□□ -1.51
CDKN3-201ENST00000216414 SULF2Q8IWU5 870 aa5.63□□□□□ -1.51
CDKN3-201ENST00000216414 RNF214Q8ND24 703 aa5.63□□□□□ -1.51
CDKN3-201ENST00000216414 ACSBG1Q96GR2 724 aa5.63□□□□□ -1.51
CDKN3-201ENST00000216414 CITED4Q96RK1 184 aa5.63□□□□□ -1.51
CDKN3-201ENST00000216414 CSRNP1Q96S65 589 aa5.63□□□□□ -1.51
CDKN3-201ENST00000216414 PPP4R2Q9NY27 417 aa5.63□□□□□ -1.51
CDKN3-201ENST00000216414 CFPP27918 469 aa5.62□□□□□ -1.51
CDKN3-201ENST00000216414 KCNMB1Q16558 191 aa5.62□□□□□ -1.51
CDKN3-201ENST00000216414 MLANAQ16655 118 aa5.62□□□□□ -1.51
CDKN3-201ENST00000216414 ZSWIM9Q86XI8 627 aa5.62□□□□□ -1.51
CDKN3-201ENST00000216414 SIAH1Q8IUQ4 282 aa5.62□□□□□ -1.51
CDKN3-201ENST00000216414 FLAD1Q8NFF5 587 aa5.62□□□□□ -1.51
CDKN3-201ENST00000216414 STK35Q8TDR2 534 aa5.62□□□□□ -1.51
CDKN3-201ENST00000216414 PPP1R16BQ96T49 567 aa5.62□□□□□ -1.51
CDKN3-201ENST00000216414 CBX8Q9HC52 389 aa5.62□□□□□ -1.51
CDKN3-201ENST00000216414 PICK1Q9NRD5 415 aa5.62□□□□□ -1.51
CDKN3-201ENST00000216414 NLRP2Q9NX02 1062 aa5.62□□□□□ -1.51
CDKN3-201ENST00000216414 GTF2IRD1Q9UHL9 959 aa5.62□□□□□ -1.51
CDKN3-201ENST00000216414 USTQ9Y2C2 406 aa5.62□□□□□ -1.51
CDKN3-201ENST00000216414 AKAP2Q9Y2D5 859 aa5.62□□□□□ -1.51
CDKN3-201ENST00000216414 SNX11Q9Y5W9 270 aa5.62□□□□□ -1.51
CDKN3-201ENST00000216414 CSADQ9Y600 493 aa5.62□□□□□ -1.51
CDKN3-201ENST00000216414 ERVK-24P63145 666 aa5.61□□□□□ -1.51
CDKN3-201ENST00000216414 ZP2Q05996 745 aa5.61□□□□□ -1.51
CDKN3-201ENST00000216414 ZC3H12AQ5D1E8 599 aaKnown RBP5.61□□□□□ -1.51
CDKN3-201ENST00000216414 PI16Q6UXB8 463 aa5.61□□□□□ -1.51
CDKN3-201ENST00000216414 ANKLE2Q86XL3 938 aa5.61□□□□□ -1.51
CDKN3-201ENST00000216414 GPBAR1Q8TDU6 330 aa5.61□□□□□ -1.51
CDKN3-201ENST00000216414 ASB11Q8WXH4 323 aa5.61□□□□□ -1.51
CDKN3-201ENST00000216414 HEXIM2Q96MH2 286 aaKnown RBP5.61□□□□□ -1.51
CDKN3-201ENST00000216414 TNKS2Q9H2K2 1166 aa5.61□□□□□ -1.51
CDKN3-201ENST00000216414 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.61□□□□□ -1.51
CDKN3-201ENST00000216414 IGHA2P01877 340 aa5.6□□□□□ -1.51
CDKN3-201ENST00000216414 ARNTP27540 789 aa5.6□□□□□ -1.51
CDKN3-201ENST00000216414 PPM1JQ5JR12 505 aa5.6□□□□□ -1.51
CDKN3-201ENST00000216414 LRRC56Q8IYG6 542 aaPredicted RBP5.6□□□□□ -1.51
CDKN3-201ENST00000216414 DMRTB1Q96MA1 342 aa5.6□□□□□ -1.51
CDKN3-201ENST00000216414 EMILIN2Q9BXX0 1053 aa5.6□□□□□ -1.51
CDKN3-201ENST00000216414 BCO2Q9BYV7 579 aa5.6□□□□□ -1.51
CDKN3-201ENST00000216414 C1orf115Q9H7X2 142 aa5.6□□□□□ -1.51
CDKN3-201ENST00000216414 ZSCAN22P10073 491 aaPredicted RBP5.59□□□□□ -1.51
CDKN3-201ENST00000216414 XRCC5P13010 732 aaKnown RBP5.59□□□□□ -1.51
CDKN3-201ENST00000216414 NME2P22392 152 aa5.59□□□□□ -1.51
CDKN3-201ENST00000216414 SPACA3Q8IXA5 215 aa5.59□□□□□ -1.51
CDKN3-201ENST00000216414 PRDM10Q9NQV6 1147 aa5.59□□□□□ -1.51
CDKN3-201ENST00000216414 ZNF503-AS2A6NEH8 195 aa5.58□□□□□ -1.52
CDKN3-201ENST00000216414 GNAT3A8MTJ3 354 aa5.58□□□□□ -1.52
CDKN3-201ENST00000216414 DCDC2CA8MYV0 355 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms