RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 TMEM94Q12767 1356 aa16.95■□□□□ 0.3
TMEM38A-201ENST00000187762 C21orf2O43822 256 aa16.95■□□□□ 0.3
TMEM38A-201ENST00000187762 PPP2R5AQ15172 486 aa16.95■□□□□ 0.3
TMEM38A-201ENST00000187762 STOX1Q6ZVD7 989 aa16.95■□□□□ 0.3
TMEM38A-201ENST00000187762 CCDC12Q8WUD4 166 aaPredicted RBP16.95■□□□□ 0.3
TMEM38A-201ENST00000187762 WDHD1O75717 1129 aaPredicted RBP16.95■□□□□ 0.3
TMEM38A-201ENST00000187762 ATP1A3P13637 1013 aa16.95■□□□□ 0.3
TMEM38A-201ENST00000187762 FOXO4P98177 505 aa16.95■□□□□ 0.3
TMEM38A-201ENST00000187762 MCMDC2Q4G0Z9 681 aa16.95■□□□□ 0.3
TMEM38A-201ENST00000187762 DPF2Q92785 391 aa16.95■□□□□ 0.3
TMEM38A-201ENST00000187762 PUF60Q9UHX1 559 aaKnown RBP16.95■□□□□ 0.3
TMEM38A-201ENST00000187762 RNF40O75150 1001 aa16.94■□□□□ 0.3
TMEM38A-201ENST00000187762 TIMM10P62072 90 aa16.94■□□□□ 0.3
TMEM38A-201ENST00000187762 GBP6Q6ZN66 633 aa16.94■□□□□ 0.3
TMEM38A-201ENST00000187762 FMR1NBQ8N0W7 255 aaPredicted RBP16.94■□□□□ 0.3
TMEM38A-201ENST00000187762 USP28Q96RU2 1077 aa16.94■□□□□ 0.3
TMEM38A-201ENST00000187762 ACBD3Q9H3P7 528 aa16.94■□□□□ 0.3
TMEM38A-201ENST00000187762 A0A0G2JLW4 131 aa16.94■□□□□ 0.3
TMEM38A-201ENST00000187762 GOLIM4O00461 696 aa16.94■□□□□ 0.3
TMEM38A-201ENST00000187762 KRT32Q14532 448 aa16.94■□□□□ 0.3
TMEM38A-201ENST00000187762 STAG1Q8WVM7 1258 aa16.94■□□□□ 0.3
TMEM38A-201ENST00000187762 TACO1Q9BSH4 297 aaKnown RBP16.94■□□□□ 0.3
TMEM38A-201ENST00000187762 A1CFQ9NQ94 594 aaKnown RBP16.94■□□□□ 0.3
TMEM38A-201ENST00000187762 GNL3LQ9NVN8 582 aaKnown RBP16.94■□□□□ 0.3
TMEM38A-201ENST00000187762 RAI14Q9P0K7 980 aa16.94■□□□□ 0.3
TMEM38A-201ENST00000187762 FAM169AQ9Y6X4 670 aa16.94■□□□□ 0.3
TMEM38A-201ENST00000187762 U3KPZ7 1027 aaPredicted RBP16.94■□□□□ 0.3
TMEM38A-201ENST00000187762 STRCP1A6NGW2 1772 aa16.94■□□□□ 0.3
TMEM38A-201ENST00000187762 ME1P48163 572 aa16.93■□□□□ 0.3
TMEM38A-201ENST00000187762 FOSBP53539 338 aa16.93■□□□□ 0.3
TMEM38A-201ENST00000187762 UBASH3AP57075 661 aa16.93■□□□□ 0.3
TMEM38A-201ENST00000187762 ATG9AQ7Z3C6 839 aa16.93■□□□□ 0.3
TMEM38A-201ENST00000187762 SGSM3Q96HU1 749 aa16.93■□□□□ 0.3
TMEM38A-201ENST00000187762 ZNF594Q96JF6 807 aaPredicted RBP16.93■□□□□ 0.3
TMEM38A-201ENST00000187762 LRRIQ3A6PVS8 624 aaPredicted RBP16.93■□□□□ 0.3
TMEM38A-201ENST00000187762 BIN1O00499 593 aa16.93■□□□□ 0.3
TMEM38A-201ENST00000187762 VSNL1P62760 191 aa16.93■□□□□ 0.3
TMEM38A-201ENST00000187762 MAP9Q49MG5 647 aa16.93■□□□□ 0.3
TMEM38A-201ENST00000187762 CPLX2Q6PUV4 134 aaKnown RBP16.93■□□□□ 0.3
TMEM38A-201ENST00000187762 TOGARAM2Q6ZUX3 1019 aa16.93■□□□□ 0.3
TMEM38A-201ENST00000187762 VSTM4Q8IW00 320 aa16.93■□□□□ 0.3
TMEM38A-201ENST00000187762 CEP112Q8N8E3 955 aa16.93■□□□□ 0.3
TMEM38A-201ENST00000187762 KBTBD3Q8NAB2 608 aa16.93■□□□□ 0.3
TMEM38A-201ENST00000187762 GIMAP7Q8NHV1 300 aa16.93■□□□□ 0.3
TMEM38A-201ENST00000187762 JPH2Q9BR39 696 aaPredicted RBP16.93■□□□□ 0.3
TMEM38A-201ENST00000187762 CBFA2T2O43439 604 aa16.92■□□□□ 0.3
TMEM38A-201ENST00000187762 PPFIA3O75145 1194 aa16.92■□□□□ 0.3
TMEM38A-201ENST00000187762 TOP1P11387 765 aaKnown RBP16.92■□□□□ 0.3
TMEM38A-201ENST00000187762 SCRN1Q12765 414 aa16.92■□□□□ 0.3
TMEM38A-201ENST00000187762 MRPS27Q92552 414 aaKnown RBP16.92■□□□□ 0.3
TMEM38A-201ENST00000187762 GBP3Q9H0R5 595 aa16.92■□□□□ 0.3
TMEM38A-201ENST00000187762 HSD3B7Q9H2F3 369 aa16.92■□□□□ 0.3
TMEM38A-201ENST00000187762 TJP1Q07157 1748 aa16.92■□□□□ 0.3
TMEM38A-201ENST00000187762 TNS3Q68CZ2 1445 aa16.92■□□□□ 0.3
TMEM38A-201ENST00000187762 A1BGP04217 495 aa16.92■□□□□ 0.3
TMEM38A-201ENST00000187762 CCT5P48643 541 aa16.92■□□□□ 0.3
TMEM38A-201ENST00000187762 NLRP12P59046 1061 aa16.92■□□□□ 0.3
TMEM38A-201ENST00000187762 SETQ01105 290 aaPredicted RBP16.92■□□□□ 0.3
TMEM38A-201ENST00000187762 GRIPAP1Q4V328 841 aa16.92■□□□□ 0.3
TMEM38A-201ENST00000187762 RNF217Q8TC41 542 aa16.92■□□□□ 0.3
TMEM38A-201ENST00000187762 ZBTB3Q9H5J0 574 aa16.92■□□□□ 0.3
TMEM38A-201ENST00000187762 H7C1W4 665 aa16.91■□□□□ 0.3
TMEM38A-201ENST00000187762 KARSQ15046 597 aaKnown RBP16.91■□□□□ 0.3
TMEM38A-201ENST00000187762 LRRC24Q50LG9 513 aa16.91■□□□□ 0.3
TMEM38A-201ENST00000187762 POTEDQ86YR6 584 aa16.91■□□□□ 0.3
TMEM38A-201ENST00000187762 BAG1Q99933 345 aaPredicted RBP16.91■□□□□ 0.3
TMEM38A-201ENST00000187762 RFX7Q2KHR2 1363 aa16.91■□□□□ 0.3
TMEM38A-201ENST00000187762 MYH15Q9Y2K3 1946 aa16.91■□□□□ 0.3
TMEM38A-201ENST00000187762 IKBKBO14920 756 aa16.91■□□□□ 0.3
TMEM38A-201ENST00000187762 PRPF6O94906 941 aaKnown RBP16.91■□□□□ 0.3
TMEM38A-201ENST00000187762 SERPINC1P01008 464 aa16.91■□□□□ 0.3
TMEM38A-201ENST00000187762 PTPN21Q16825 1174 aa16.91■□□□□ 0.3
TMEM38A-201ENST00000187762 CFAP100Q494V2 611 aa16.91■□□□□ 0.3
TMEM38A-201ENST00000187762 MIEF2Q96C03 454 aa16.91■□□□□ 0.3
TMEM38A-201ENST00000187762 PAG1Q9NWQ8 432 aa16.91■□□□□ 0.3
TMEM38A-201ENST00000187762 NUP188Q5SRE5 1749 aa16.91■□□□□ 0.3
TMEM38A-201ENST00000187762 ABCC6O95255 1503 aa16.91■□□□□ 0.3
TMEM38A-201ENST00000187762 A0A1B0GVL5 298 aa16.9■□□□□ 0.3
TMEM38A-201ENST00000187762 TMEM232C9JQI7 657 aa16.9■□□□□ 0.3
TMEM38A-201ENST00000187762 EBAG9O00559 213 aa16.9■□□□□ 0.3
TMEM38A-201ENST00000187762 SYF2O95926 243 aaKnown RBP16.9■□□□□ 0.3
TMEM38A-201ENST00000187762 RHOXF2BP0C7M4 288 aa16.9■□□□□ 0.3
TMEM38A-201ENST00000187762 GPTP24298 496 aa16.9■□□□□ 0.3
TMEM38A-201ENST00000187762 PRPF38AQ8NAV1 312 aaKnown RBP16.9■□□□□ 0.3
TMEM38A-201ENST00000187762 RHOXF2Q9BQY4 288 aa16.9■□□□□ 0.3
TMEM38A-201ENST00000187762 CDC23Q9UJX2 597 aa16.9■□□□□ 0.3
TMEM38A-201ENST00000187762 NEDD4P46934 1319 aa16.9■□□□□ 0.3
TMEM38A-201ENST00000187762 NBPF20Q3BBV1 942 aa16.9■□□□□ 0.3
TMEM38A-201ENST00000187762 ZNF396Q96N95 335 aaPredicted RBP16.9■□□□□ 0.3
TMEM38A-201ENST00000187762 CWC25Q9NXE8 425 aaPredicted RBP16.9■□□□□ 0.3
TMEM38A-201ENST00000187762 SH3TC1Q8TE82 1336 aa16.9■□□□□ 0.3
TMEM38A-201ENST00000187762 INPP5BP32019 993 aa16.89■□□□□ 0.29
TMEM38A-201ENST00000187762 IRX2Q9BZI1 471 aaPredicted RBP16.89■□□□□ 0.29
TMEM38A-201ENST00000187762 SHOX2O60902 331 aaPredicted RBP16.89■□□□□ 0.29
TMEM38A-201ENST00000187762 ELF1P32519 619 aa16.89■□□□□ 0.29
TMEM38A-201ENST00000187762 AARSP49588 968 aaKnown RBP eCLIP16.89■□□□□ 0.29
TMEM38A-201ENST00000187762 NDUFA8P51970 172 aa16.89■□□□□ 0.29
TMEM38A-201ENST00000187762 CHST3Q7LGC8 479 aa16.89■□□□□ 0.29
TMEM38A-201ENST00000187762 PUS3Q9BZE2 481 aaKnown RBP16.89■□□□□ 0.29
TMEM38A-201ENST00000187762 PCDHA7Q9UN72 937 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms