RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 VPS16Q9H269 839 aa19.56■□□□□ 0.72
PTPN18-201ENST00000175756 SMC1AQ14683 1233 aaKnown RBP19.56■□□□□ 0.72
PTPN18-201ENST00000175756 ZNF174Q15697 407 aa19.56■□□□□ 0.72
PTPN18-201ENST00000175756 SPECC1LQ69YQ0 1117 aa19.56■□□□□ 0.72
PTPN18-201ENST00000175756 CUTAO60888 179 aa19.55■□□□□ 0.72
PTPN18-201ENST00000175756 EEF2KMTQ96G04 330 aa19.55■□□□□ 0.72
PTPN18-201ENST00000175756 NUTM2AQ8IVF1 878 aaPredicted RBP19.55■□□□□ 0.72
PTPN18-201ENST00000175756 DNAJC10Q8IXB1 793 aa19.55■□□□□ 0.72
PTPN18-201ENST00000175756 HINFPQ9BQA5 517 aa19.55■□□□□ 0.72
PTPN18-201ENST00000175756 CEP131Q9UPN4 1083 aa19.55■□□□□ 0.72
PTPN18-201ENST00000175756 H7C1W4 665 aa19.55■□□□□ 0.72
PTPN18-201ENST00000175756 CDC27P30260 824 aa19.55■□□□□ 0.72
PTPN18-201ENST00000175756 TTF1Q15361 905 aaPredicted RBP19.55■□□□□ 0.72
PTPN18-201ENST00000175756 SHC4Q6S5L8 630 aa19.55■□□□□ 0.72
PTPN18-201ENST00000175756 CYB5R4Q7L1T6 521 aa19.55■□□□□ 0.72
PTPN18-201ENST00000175756 PLIN2Q99541 437 aa19.55■□□□□ 0.72
PTPN18-201ENST00000175756 CWC15Q9P013 229 aaKnown RBP19.55■□□□□ 0.72
PTPN18-201ENST00000175756 PXDNQ92626 1479 aa19.54■□□□□ 0.72
PTPN18-201ENST00000175756 AKR1B15C9JRZ8 316 aaPredicted RBP19.54■□□□□ 0.72
PTPN18-201ENST00000175756 RRAGBQ5VZM2 374 aa19.54■□□□□ 0.72
PTPN18-201ENST00000175756 C10orf67Q8IYJ2 551 aa19.54■□□□□ 0.72
PTPN18-201ENST00000175756 TRIM34Q9BYJ4 488 aa19.54■□□□□ 0.72
PTPN18-201ENST00000175756 GOLGA6L9A6NEM1 432 aa19.54■□□□□ 0.72
PTPN18-201ENST00000175756 IRS4O14654 1257 aaPredicted RBP19.54■□□□□ 0.72
PTPN18-201ENST00000175756 PHKA1P46020 1223 aa19.54■□□□□ 0.72
PTPN18-201ENST00000175756 NAP1L1P55209 391 aaKnown RBP19.54■□□□□ 0.72
PTPN18-201ENST00000175756 AXDND1Q5T1B0 1012 aaPredicted RBP19.54■□□□□ 0.72
PTPN18-201ENST00000175756 GDAP1L1Q96MZ0 367 aa19.54■□□□□ 0.72
PTPN18-201ENST00000175756 SPATA31D1Q6ZQQ2 1576 aa19.54■□□□□ 0.72
PTPN18-201ENST00000175756 UTYO14607 1347 aa19.54■□□□□ 0.72
PTPN18-201ENST00000175756 VWA3AA6NCI4 1184 aa19.54■□□□□ 0.72
PTPN18-201ENST00000175756 TOGARAM2Q6ZUX3 1019 aa19.54■□□□□ 0.72
PTPN18-201ENST00000175756 KLHL34Q8N239 644 aa19.54■□□□□ 0.72
PTPN18-201ENST00000175756 MROH7-TTC4A0A0A0MT08 1334 aa19.53■□□□□ 0.72
PTPN18-201ENST00000175756 CCDC196A0A1B0GTZ2 297 aa19.53■□□□□ 0.72
PTPN18-201ENST00000175756 TBC1D10CQ8IV04 446 aa19.53■□□□□ 0.72
PTPN18-201ENST00000175756 WDR24Q96S15 920 aa19.53■□□□□ 0.72
PTPN18-201ENST00000175756 GREM2Q9H772 168 aa19.53■□□□□ 0.72
PTPN18-201ENST00000175756 VPS54Q9P1Q0 977 aa19.53■□□□□ 0.72
PTPN18-201ENST00000175756 GUCA1BQ9UMX6 200 aa19.53■□□□□ 0.72
PTPN18-201ENST00000175756 RICTORQ6R327 1708 aa19.53■□□□□ 0.72
PTPN18-201ENST00000175756 RABL6Q3YEC7 729 aaPredicted RBP19.53■□□□□ 0.72
PTPN18-201ENST00000175756 WWC3Q9ULE0 1092 aa19.53■□□□□ 0.72
PTPN18-201ENST00000175756 TRIM75PA6NK02 468 aa19.53■□□□□ 0.72
PTPN18-201ENST00000175756 CHMP4BP1P59074 171 aa19.53■□□□□ 0.72
PTPN18-201ENST00000175756 MTF1Q14872 753 aa19.53■□□□□ 0.72
PTPN18-201ENST00000175756 NOSTRINQ8IVI9 506 aa19.53■□□□□ 0.72
PTPN18-201ENST00000175756 BLZF1Q9H2G9 400 aa19.53■□□□□ 0.72
PTPN18-201ENST00000175756 C3P01024 1663 aa19.52■□□□□ 0.72
PTPN18-201ENST00000175756 EIF3JO75822 258 aaKnown RBP19.52■□□□□ 0.72
PTPN18-201ENST00000175756 ZMYM6O95789 1325 aa19.52■□□□□ 0.72
PTPN18-201ENST00000175756 SOWAHDA6NJG2 315 aa19.52■□□□□ 0.72
PTPN18-201ENST00000175756 CAPN2P17655 700 aa19.52■□□□□ 0.72
PTPN18-201ENST00000175756 VSTM4Q8IW00 320 aa19.52■□□□□ 0.72
PTPN18-201ENST00000175756 CAPZA3Q96KX2 299 aa19.52■□□□□ 0.72
PTPN18-201ENST00000175756 PRKAB2O43741 272 aa19.52■□□□□ 0.71
PTPN18-201ENST00000175756 PDE6AP16499 860 aa19.52■□□□□ 0.71
PTPN18-201ENST00000175756 EIF5P55010 431 aaKnown RBP19.52■□□□□ 0.71
PTPN18-201ENST00000175756 HNRNPH2P55795 449 aaKnown RBP19.52■□□□□ 0.71
PTPN18-201ENST00000175756 KIAA1328Q86T90 577 aa19.52■□□□□ 0.71
PTPN18-201ENST00000175756 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.52■□□□□ 0.71
PTPN18-201ENST00000175756 IKBKBO14920 756 aa19.51■□□□□ 0.71
PTPN18-201ENST00000175756 DNA2P51530 1060 aa19.51■□□□□ 0.71
PTPN18-201ENST00000175756 ANTXR2P58335 489 aa19.51■□□□□ 0.71
PTPN18-201ENST00000175756 MB21D2Q8IYB1 491 aaPredicted RBP19.51■□□□□ 0.71
PTPN18-201ENST00000175756 MCAMP43121 646 aa19.51■□□□□ 0.71
PTPN18-201ENST00000175756 ZSWIM5Q9P217 1185 aa19.51■□□□□ 0.71
PTPN18-201ENST00000175756 EFCAB8A8MWE9 144 aa19.5■□□□□ 0.71
PTPN18-201ENST00000175756 CYP7A1P22680 504 aa19.5■□□□□ 0.71
PTPN18-201ENST00000175756 TCIRG1Q13488 830 aa19.5■□□□□ 0.71
PTPN18-201ENST00000175756 PARD6BQ9BYG5 372 aa19.5■□□□□ 0.71
PTPN18-201ENST00000175756 V9GY48 417 aaPredicted RBP19.5■□□□□ 0.71
PTPN18-201ENST00000175756 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.5■□□□□ 0.71
PTPN18-201ENST00000175756 SLC5A1P13866 664 aa19.5■□□□□ 0.71
PTPN18-201ENST00000175756 NLRP5P59047 1200 aa19.5■□□□□ 0.71
PTPN18-201ENST00000175756 PCDHB6Q9Y5E3 794 aa19.5■□□□□ 0.71
PTPN18-201ENST00000175756 DIP2AQ14689 1571 aa19.5■□□□□ 0.71
PTPN18-201ENST00000175756 DIP2BQ9P265 1576 aa19.5■□□□□ 0.71
PTPN18-201ENST00000175756 TUBB4AP04350 444 aa19.5■□□□□ 0.71
PTPN18-201ENST00000175756 PRR29P0C7W0 189 aa19.5■□□□□ 0.71
PTPN18-201ENST00000175756 PDE4BQ07343 736 aa19.5■□□□□ 0.71
PTPN18-201ENST00000175756 BICDL1Q6ZP65 573 aa19.5■□□□□ 0.71
PTPN18-201ENST00000175756 MAN1B1Q9UKM7 699 aa19.5■□□□□ 0.71
PTPN18-201ENST00000175756 HPS5Q9UPZ3 1129 aa19.5■□□□□ 0.71
PTPN18-201ENST00000175756 CTAGE9A4FU28 777 aa19.49■□□□□ 0.71
PTPN18-201ENST00000175756 MATR3P43243 847 aaKnown RBP eCLIP19.49■□□□□ 0.711e-6■■■■□ 25.1
PTPN18-201ENST00000175756 WWC2Q6AWC2 1192 aa19.49■□□□□ 0.71
PTPN18-201ENST00000175756 TMEM87BQ96K49 555 aa19.49■□□□□ 0.71
PTPN18-201ENST00000175756 PIH1D3Q9NQM4 214 aaKnown RBP19.49■□□□□ 0.71
PTPN18-201ENST00000175756 MAGEC2Q9UBF1 373 aaPredicted RBP19.49■□□□□ 0.71
PTPN18-201ENST00000175756 CTNND2Q9UQB3 1225 aa19.49■□□□□ 0.71
PTPN18-201ENST00000175756 GRIN1Q05586 938 aa19.49■□□□□ 0.71
PTPN18-201ENST00000175756 MLKLQ8NB16 471 aa19.49■□□□□ 0.71
PTPN18-201ENST00000175756 DRC1Q96MC2 740 aa19.49■□□□□ 0.71
PTPN18-201ENST00000175756 SLF1Q9BQI6 1058 aa19.49■□□□□ 0.71
PTPN18-201ENST00000175756 GUCY1A2P33402 732 aa19.49■□□□□ 0.71
PTPN18-201ENST00000175756 METTL16Q86W50 562 aaKnown RBP19.49■□□□□ 0.71
PTPN18-201ENST00000175756 PLCD3Q8N3E9 789 aa19.49■□□□□ 0.71
PTPN18-201ENST00000175756 TXLNBQ8N3L3 684 aa19.49■□□□□ 0.71
PTPN18-201ENST00000175756 ACBD3Q9H3P7 528 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms