RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 TADA3O75528 432 aa23.3■■□□□ 1.32
RCN1-201ENST00000054950 CTDSPL2Q05D32 466 aa23.3■■□□□ 1.32
RCN1-201ENST00000054950 CCDC102BQ68D86 513 aa23.3■■□□□ 1.32
RCN1-201ENST00000054950 LDHAL6AQ6ZMR3 332 aa23.3■■□□□ 1.32
RCN1-201ENST00000054950 PPP2R2CQ9Y2T4 447 aa23.3■■□□□ 1.32
RCN1-201ENST00000054950 TACC3Q9Y6A5 838 aa23.3■■□□□ 1.32
RCN1-201ENST00000054950 MST1RQ04912 1400 aa23.3■■□□□ 1.32
RCN1-201ENST00000054950 TOGARAM2Q6ZUX3 1019 aa23.3■■□□□ 1.32
RCN1-201ENST00000054950 IGDCC4Q8TDY8 1250 aa23.3■■□□□ 1.32
RCN1-201ENST00000054950 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.3■■□□□ 1.32
RCN1-201ENST00000054950 LY9Q9HBG7 655 aa23.3■■□□□ 1.32
RCN1-201ENST00000054950 BTBD18B2RXH4 712 aa23.29■■□□□ 1.32
RCN1-201ENST00000054950 TMEM67Q5HYA8 995 aa23.29■■□□□ 1.32
RCN1-201ENST00000054950 NOL10Q9BSC4 688 aaKnown RBP23.29■■□□□ 1.32
RCN1-201ENST00000054950 WDR19Q8NEZ3 1342 aa23.29■■□□□ 1.32
RCN1-201ENST00000054950 ATF3P18847 181 aa23.29■■□□□ 1.32
RCN1-201ENST00000054950 TOM1L2Q6ZVM7 507 aa23.29■■□□□ 1.32
RCN1-201ENST00000054950 DESI2Q9BSY9 194 aa23.29■■□□□ 1.32
RCN1-201ENST00000054950 UBR2Q8IWV8 1755 aa23.29■■□□□ 1.32
RCN1-201ENST00000054950 ZBTB22O15209 634 aa23.28■■□□□ 1.32
RCN1-201ENST00000054950 CDKL5O76039 1030 aa23.28■■□□□ 1.32
RCN1-201ENST00000054950 ITGA6P23229 1130 aa23.28■■□□□ 1.32
RCN1-201ENST00000054950 PHKA1P46020 1223 aa23.28■■□□□ 1.32
RCN1-201ENST00000054950 TRIM29Q14134 588 aa23.28■■□□□ 1.32
RCN1-201ENST00000054950 ZKSCAN3Q9BRR0 538 aa23.28■■□□□ 1.32
RCN1-201ENST00000054950 MAN1B1Q9UKM7 699 aa23.28■■□□□ 1.32
RCN1-201ENST00000054950 RIPOR2Q9Y4F9 1068 aa23.28■■□□□ 1.32
RCN1-201ENST00000054950 PCDH11XQ9BZA7 1347 aa23.28■■□□□ 1.32
RCN1-201ENST00000054950 PCDH11YQ9BZA8 1340 aa23.28■■□□□ 1.32
RCN1-201ENST00000054950 CUTAO60888 179 aa23.28■■□□□ 1.32
RCN1-201ENST00000054950 ZRANB2O95218 330 aaKnown RBP eCLIP23.28■■□□□ 1.32
RCN1-201ENST00000054950 ATP2B1P20020 1258 aa23.28■■□□□ 1.32
RCN1-201ENST00000054950 POLR3GO15318 223 aaPredicted RBP23.27■■□□□ 1.32
RCN1-201ENST00000054950 TOB1P50616 345 aaPredicted RBP23.27■■□□□ 1.32
RCN1-201ENST00000054950 CPLX2Q6PUV4 134 aaKnown RBP23.27■■□□□ 1.32
RCN1-201ENST00000054950 HELBQ8NG08 1087 aaPredicted RBP23.27■■□□□ 1.32
RCN1-201ENST00000054950 SEC31BQ9NQW1 1179 aa23.27■■□□□ 1.32
RCN1-201ENST00000054950 NFE2L3Q9Y4A8 694 aa23.27■■□□□ 1.32
RCN1-201ENST00000054950 FAM237AA0A1B0GTK4 181 aa23.27■■□□□ 1.32
RCN1-201ENST00000054950 GNG11P61952 73 aa23.27■■□□□ 1.32
RCN1-201ENST00000054950 MDM2Q00987 491 aaPredicted RBP23.27■■□□□ 1.32
RCN1-201ENST00000054950 TMCO3Q6UWJ1 677 aa23.27■■□□□ 1.32
RCN1-201ENST00000054950 BAG1Q99933 345 aaPredicted RBP23.27■■□□□ 1.32
RCN1-201ENST00000054950 CNNM1Q9NRU3 951 aa23.27■■□□□ 1.32
RCN1-201ENST00000054950 SERTAD1Q9UHV2 236 aa23.27■■□□□ 1.32
RCN1-201ENST00000054950 SNAP23O00161 211 aa23.26■■□□□ 1.31
RCN1-201ENST00000054950 POLR2DO15514 142 aaKnown RBP23.26■■□□□ 1.31
RCN1-201ENST00000054950 CCP110O43303 1012 aa23.26■■□□□ 1.31
RCN1-201ENST00000054950 CSF1RP07333 972 aa23.26■■□□□ 1.31
RCN1-201ENST00000054950 PDE6AP16499 860 aa23.26■■□□□ 1.31
RCN1-201ENST00000054950 HLFQ16534 295 aa23.26■■□□□ 1.31
RCN1-201ENST00000054950 EPB41L4AQ9HCS5 686 aaPredicted RBP23.26■■□□□ 1.31
RCN1-201ENST00000054950 PARP4Q9UKK3 1724 aaKnown RBP23.26■■□□□ 1.31
RCN1-201ENST00000054950 PCCAP05165 728 aaPredicted RBP23.26■■□□□ 1.31
RCN1-201ENST00000054950 MTF1Q14872 753 aa23.26■■□□□ 1.31
RCN1-201ENST00000054950 KARSQ15046 597 aaKnown RBP23.26■■□□□ 1.31
RCN1-201ENST00000054950 KRI1Q8N9T8 703 aaKnown RBP23.26■■□□□ 1.31
RCN1-201ENST00000054950 MED15Q96RN5 788 aa23.26■■□□□ 1.31
RCN1-201ENST00000054950 ZSWIM5Q9P217 1185 aa23.26■■□□□ 1.31
RCN1-201ENST00000054950 USP49Q70CQ1 688 aa23.25■■□□□ 1.31
RCN1-201ENST00000054950 TC2NQ8N9U0 490 aa23.25■■□□□ 1.31
RCN1-201ENST00000054950 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.25■■□□□ 1.31
RCN1-201ENST00000054950 SAMSN1Q9NSI8 373 aaKnown RBP23.25■■□□□ 1.31
RCN1-201ENST00000054950 IFIT3O14879 490 aaKnown RBP23.25■■□□□ 1.31
RCN1-201ENST00000054950 ARHGAP6O43182 974 aa23.25■■□□□ 1.31
RCN1-201ENST00000054950 SASH3O75995 380 aa23.25■■□□□ 1.31
RCN1-201ENST00000054950 CDK11BP21127 795 aaKnown RBP23.25■■□□□ 1.31
RCN1-201ENST00000054950 NR5A1Q13285 461 aa23.25■■□□□ 1.31
RCN1-201ENST00000054950 RRP12Q5JTH9 1297 aaKnown RBP23.25■■□□□ 1.31
RCN1-201ENST00000054950 DNAJC10Q8IXB1 793 aa23.25■■□□□ 1.31
RCN1-201ENST00000054950 ZBTB9Q96C00 473 aa23.25■■□□□ 1.31
RCN1-201ENST00000054950 IRX2Q9BZI1 471 aaPredicted RBP23.25■■□□□ 1.31
RCN1-201ENST00000054950 ERVV-2B6SEH9 535 aa23.24■■□□□ 1.31
RCN1-201ENST00000054950 TBX2Q13207 712 aaPredicted RBP23.24■■□□□ 1.31
RCN1-201ENST00000054950 DHX8Q14562 1220 aaKnown RBP23.24■■□□□ 1.31
RCN1-201ENST00000054950 POSTNQ15063 836 aa23.24■■□□□ 1.31
RCN1-201ENST00000054950 TEX35Q5T0J7 233 aa23.24■■□□□ 1.31
RCN1-201ENST00000054950 NOSTRINQ8IVI9 506 aa23.24■■□□□ 1.31
RCN1-201ENST00000054950 ZBTB38Q8NAP3 1195 aaPredicted RBP23.24■■□□□ 1.31
RCN1-201ENST00000054950 TTLL11Q8NHH1 800 aa23.24■■□□□ 1.31
RCN1-201ENST00000054950 A0A0U1RQG5 324 aaPredicted RBP23.24■■□□□ 1.31
RCN1-201ENST00000054950 A0A0U1RQJ8 604 aa23.24■■□□□ 1.31
RCN1-201ENST00000054950 SSRP1Q08945 709 aaKnown RBP23.24■■□□□ 1.31
RCN1-201ENST00000054950 DIS3L2Q8IYB7 885 aaKnown RBP23.24■■□□□ 1.31
RCN1-201ENST00000054950 ATRIPQ8WXE1 791 aa23.24■■□□□ 1.31
RCN1-201ENST00000054950 AIDAQ96BJ3 306 aa23.24■■□□□ 1.31
RCN1-201ENST00000054950 PCDHB6Q9Y5E3 794 aa23.24■■□□□ 1.31
RCN1-201ENST00000054950 SLC12A7Q9Y666 1083 aa23.24■■□□□ 1.31
RCN1-201ENST00000054950 ZSCAN12O43309 604 aa23.23■■□□□ 1.31
RCN1-201ENST00000054950 TUBB4AP04350 444 aa23.23■■□□□ 1.31
RCN1-201ENST00000054950 TRHP20396 242 aaPredicted RBP23.23■■□□□ 1.31
RCN1-201ENST00000054950 STRBPQ96SI9 672 aaKnown RBP23.23■■□□□ 1.31
RCN1-201ENST00000054950 TNS3Q68CZ2 1445 aa23.23■■□□□ 1.31
RCN1-201ENST00000054950 CASQ1P31415 396 aa23.23■■□□□ 1.31
RCN1-201ENST00000054950 TMEM87BQ96K49 555 aa23.23■■□□□ 1.31
RCN1-201ENST00000054950 TOMM22Q9NS69 142 aa23.23■■□□□ 1.31
RCN1-201ENST00000054950 ARGLU1Q9NWB6 273 aaPredicted RBP23.23■■□□□ 1.31
RCN1-201ENST00000054950 FBXO3Q9UK99 471 aa23.23■■□□□ 1.31
RCN1-201ENST00000054950 TCRBV5S4A2TA0A5A2 114 aa23.22■■□□□ 1.31
RCN1-201ENST00000054950 EFCAB8A8MWE9 144 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms