RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 WDHD1O75717 1129 aaPredicted RBP15.21■□□□□ 0.03
CTNS-201ENST00000046640 ATP2B1P20020 1258 aa15.21■□□□□ 0.03
CTNS-201ENST00000046640 ANO1Q5XXA6 986 aa15.21■□□□□ 0.03
CTNS-201ENST00000046640 ADALQ6DHV7 355 aa15.21■□□□□ 0.03
CTNS-201ENST00000046640 FMR1NBQ8N0W7 255 aaPredicted RBP15.21■□□□□ 0.03
CTNS-201ENST00000046640 CCDC112Q8NEF3 446 aa15.21■□□□□ 0.03
CTNS-201ENST00000046640 C8orf37Q96NL8 207 aa15.21■□□□□ 0.03
CTNS-201ENST00000046640 COL16A1Q07092 1604 aaPredicted RBP15.21■□□□□ 0.03
CTNS-201ENST00000046640 PRDM1O75626 825 aa15.21■□□□□ 0.02
CTNS-201ENST00000046640 SPECC1Q5M775 1068 aa15.21■□□□□ 0.02
CTNS-201ENST00000046640 AKNAD1Q5T1N1 836 aa15.21■□□□□ 0.02
CTNS-201ENST00000046640 CHMP4CQ96CF2 233 aa15.21■□□□□ 0.02
CTNS-201ENST00000046640 CLIC6Q96NY7 704 aa15.21■□□□□ 0.02
CTNS-201ENST00000046640 FAM217BQ9NTX9 383 aaPredicted RBP15.21■□□□□ 0.02
CTNS-201ENST00000046640 SRP68Q9UHB9 627 aaKnown RBP15.21■□□□□ 0.02
CTNS-201ENST00000046640 KCNJ14Q9UNX9 436 aa15.21■□□□□ 0.02
CTNS-201ENST00000046640 KLRK1P26718 216 aa15.2■□□□□ 0.02
CTNS-201ENST00000046640 IQCB1Q15051 598 aa15.2■□□□□ 0.02
CTNS-201ENST00000046640 STX1AQ16623 288 aa15.2■□□□□ 0.02
CTNS-201ENST00000046640 SLC51AQ86UW1 340 aa15.2■□□□□ 0.02
CTNS-201ENST00000046640 AOPEPQ8N6M6 819 aa15.2■□□□□ 0.02
CTNS-201ENST00000046640 CELF1Q92879 486 aaKnown RBP15.2■□□□□ 0.02
CTNS-201ENST00000046640 COL4A1P02462 1669 aa15.2■□□□□ 0.02
CTNS-201ENST00000046640 SPATA31A5Q5VU36 1347 aa15.2■□□□□ 0.02
CTNS-201ENST00000046640 SPATA31A7Q8IWB4 1347 aa15.2■□□□□ 0.02
CTNS-201ENST00000046640 MYH14Q7Z406 1995 aaKnown RBP15.2■□□□□ 0.02
CTNS-201ENST00000046640 A0A0U1RQG5 324 aaPredicted RBP15.2■□□□□ 0.02
CTNS-201ENST00000046640 hCG_1642624A0A1W2PR95 340 aa15.2■□□□□ 0.02
CTNS-201ENST00000046640 DYNLL1P63167 89 aaKnown RBP15.2■□□□□ 0.02
CTNS-201ENST00000046640 CPLX2Q6PUV4 134 aaKnown RBP15.2■□□□□ 0.02
CTNS-201ENST00000046640 ANKRD18AQ8IVF6 992 aa15.2■□□□□ 0.02
CTNS-201ENST00000046640 CDCA7Q9BWT1 371 aaPredicted RBP15.2■□□□□ 0.02
CTNS-201ENST00000046640 SKILP12757 684 aa15.19■□□□□ 0.02
CTNS-201ENST00000046640 EVX2Q03828 476 aa15.19■□□□□ 0.02
CTNS-201ENST00000046640 CEP135Q66GS9 1140 aa15.19■□□□□ 0.02
CTNS-201ENST00000046640 LRRC8AQ8IWT6 810 aa15.19■□□□□ 0.02
CTNS-201ENST00000046640 TFCP2L1Q9NZI6 479 aa15.19■□□□□ 0.02
CTNS-201ENST00000046640 DMTNQ08495 405 aa15.19■□□□□ 0.02
CTNS-201ENST00000046640 DPCR1Q3MIW9 517 aa15.19■□□□□ 0.02
CTNS-201ENST00000046640 TBC1D9BQ66K14 1250 aa15.19■□□□□ 0.02
CTNS-201ENST00000046640 ATL3Q6DD88 541 aa15.19■□□□□ 0.02
CTNS-201ENST00000046640 ANKRD7Q92527 254 aa15.19■□□□□ 0.02
CTNS-201ENST00000046640 TMEM87BQ96K49 555 aa15.19■□□□□ 0.02
CTNS-201ENST00000046640 NACAP1Q9BZK3 213 aa15.19■□□□□ 0.02
CTNS-201ENST00000046640 MYH7P12883 1935 aa15.19■□□□□ 0.02
CTNS-201ENST00000046640 ZNF202O95125 648 aa15.18■□□□□ 0.02
CTNS-201ENST00000046640 TRIM29Q14134 588 aa15.18■□□□□ 0.02
CTNS-201ENST00000046640 ZRSR1Q15695 479 aaKnown RBP15.18■□□□□ 0.02
CTNS-201ENST00000046640 NTRK3Q16288 839 aa15.18■□□□□ 0.02
CTNS-201ENST00000046640 KCNG4Q8TDN1 519 aa15.18■□□□□ 0.02
CTNS-201ENST00000046640 POLR3EQ9NVU0 708 aa15.18■□□□□ 0.02
CTNS-201ENST00000046640 SMTNL1A8MU46 457 aa15.18■□□□□ 0.02
CTNS-201ENST00000046640 CTAGE5O15320 804 aa15.18■□□□□ 0.02
CTNS-201ENST00000046640 CTIFO43310 598 aaKnown RBP15.18■□□□□ 0.02
CTNS-201ENST00000046640 PFKFB1P16118 471 aa15.18■□□□□ 0.02
CTNS-201ENST00000046640 BRAPQ7Z569 592 aa15.18■□□□□ 0.02
CTNS-201ENST00000046640 NGLY1Q96IV0 654 aa15.18■□□□□ 0.02
CTNS-201ENST00000046640 AK7Q96M32 723 aa15.18■□□□□ 0.02
CTNS-201ENST00000046640 CDC5LQ99459 802 aaKnown RBP15.18■□□□□ 0.02
CTNS-201ENST00000046640 ZNF652Q9Y2D9 606 aa15.18■□□□□ 0.02
CTNS-201ENST00000046640 MROH7-TTC4A0A0A0MT08 1334 aa15.18■□□□□ 0.02
CTNS-201ENST00000046640 ANKRD36CQ5JPF3 1778 aa15.18■□□□□ 0.02
CTNS-201ENST00000046640 BTBD18B2RXH4 712 aa15.18■□□□□ 0.02
CTNS-201ENST00000046640 CDKL5O76039 1030 aa15.18■□□□□ 0.02
CTNS-201ENST00000046640 WTAPQ15007 396 aa15.18■□□□□ 0.02
CTNS-201ENST00000046640 DHX40Q8IX18 779 aaKnown RBP15.18■□□□□ 0.02
CTNS-201ENST00000046640 THRAP3Q9Y2W1 955 aaKnown RBP15.18■□□□□ 0.02
CTNS-201ENST00000046640 TAF1P21675 1872 aa15.17■□□□□ 0.02
CTNS-201ENST00000046640 ATRNO75882 1429 aa15.17■□□□□ 0.02
CTNS-201ENST00000046640 SSRP1Q08945 709 aaKnown RBP15.17■□□□□ 0.02
CTNS-201ENST00000046640 ANO10Q9NW15 660 aa15.17■□□□□ 0.02
CTNS-201ENST00000046640 MAGEB6P1A0A0J9YX57 407 aa15.17■□□□□ 0.02
CTNS-201ENST00000046640 AXDND1Q5T1B0 1012 aaPredicted RBP15.17■□□□□ 0.02
CTNS-201ENST00000046640 MINPP1Q9UNW1 487 aa15.17■□□□□ 0.02
CTNS-201ENST00000046640 YEATS4O95619 227 aa15.16■□□□□ 0.02
CTNS-201ENST00000046640 PPARAQ07869 468 aa15.16■□□□□ 0.02
CTNS-201ENST00000046640 PTPN14Q15678 1187 aa15.16■□□□□ 0.02
CTNS-201ENST00000046640 ALX1Q15699 326 aa15.16■□□□□ 0.02
CTNS-201ENST00000046640 WDR19Q8NEZ3 1342 aa15.16■□□□□ 0.02
CTNS-201ENST00000046640 ERICH2A1L162 156 aa15.16■□□□□ 0.02
CTNS-201ENST00000046640 SMC2O95347 1197 aa15.16■□□□□ 0.02
CTNS-201ENST00000046640 SLC3A2P08195 630 aaKnown RBP15.16■□□□□ 0.02
CTNS-201ENST00000046640 PTPN21Q16825 1174 aa15.16■□□□□ 0.02
CTNS-201ENST00000046640 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.16■□□□□ 0.02
CTNS-201ENST00000046640 CEP57L1Q8IYX8 460 aa15.16■□□□□ 0.02
CTNS-201ENST00000046640 KRT23Q9C075 422 aa15.16■□□□□ 0.02
CTNS-201ENST00000046640 KIAA1468Q9P260 1216 aa15.16■□□□□ 0.02
CTNS-201ENST00000046640 NR5A1Q13285 461 aa15.15■□□□□ 0.02
CTNS-201ENST00000046640 GOLGB1Q14789 3259 aaKnown RBP15.15■□□□□ 0.02
CTNS-201ENST00000046640 SLC39A14Q15043 492 aa15.15■□□□□ 0.02
CTNS-201ENST00000046640 RTN1Q16799 776 aa15.15■□□□□ 0.02
CTNS-201ENST00000046640 AMIGO3Q86WK7 504 aa15.15■□□□□ 0.02
CTNS-201ENST00000046640 UBAC1Q9BSL1 405 aa15.15■□□□□ 0.02
CTNS-201ENST00000046640 A0A1W2PQ27 194 aa15.15■□□□□ 0.02
CTNS-201ENST00000046640 A0A1W2PQ64 194 aa15.15■□□□□ 0.02
CTNS-201ENST00000046640 A0A1W2PQD8 194 aa15.15■□□□□ 0.02
CTNS-201ENST00000046640 CAVIN4Q5BKX8 364 aa15.15■□□□□ 0.02
CTNS-201ENST00000046640 SGMS1Q86VZ5 419 aa15.15■□□□□ 0.02
CTNS-201ENST00000046640 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.15■□□□□ 0.02
CTNS-201ENST00000046640 ZNF215Q9UL58 517 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms