RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 IFIT3O14879 490 aaKnown RBP16.76■□□□□ 0.27
RTFDC1-201ENST00000023939 CDKL5O76039 1030 aa16.76■□□□□ 0.27
RTFDC1-201ENST00000023939 XRCC6P12956 609 aaKnown RBP eCLIP16.76■□□□□ 0.27
RTFDC1-201ENST00000023939 METAP2P50579 478 aaKnown RBP eCLIP16.76■□□□□ 0.273e-6■■□□□ 14.5
RTFDC1-201ENST00000023939 PPP4CP60510 307 aa16.76■□□□□ 0.27
RTFDC1-201ENST00000023939 CERS3Q8IU89 383 aa16.76■□□□□ 0.27
RTFDC1-201ENST00000023939 ESR2Q92731 530 aa16.76■□□□□ 0.27
RTFDC1-201ENST00000023939 PARP3Q9Y6F1 533 aa16.76■□□□□ 0.27
RTFDC1-201ENST00000023939 ZBTB43O43298 467 aa16.75■□□□□ 0.27
RTFDC1-201ENST00000023939 LDHCP07864 332 aa16.75■□□□□ 0.27
RTFDC1-201ENST00000023939 MMP10P09238 476 aa16.75■□□□□ 0.27
RTFDC1-201ENST00000023939 CTR9Q6PD62 1173 aa16.75■□□□□ 0.27
RTFDC1-201ENST00000023939 CPLX2Q6PUV4 134 aaKnown RBP16.75■□□□□ 0.27
RTFDC1-201ENST00000023939 DCP1AQ9NPI6 582 aaPredicted RBP16.75■□□□□ 0.27
RTFDC1-201ENST00000023939 RBM27Q9P2N5 1060 aaKnown RBP16.75■□□□□ 0.27
RTFDC1-201ENST00000023939 POLLQ9UGP5 575 aa16.75■□□□□ 0.27
RTFDC1-201ENST00000023939 MINDY4BA8MYZ0 360 aa16.74■□□□□ 0.27
RTFDC1-201ENST00000023939 ORC4O43929 436 aa16.74■□□□□ 0.27
RTFDC1-201ENST00000023939 ALDH1B1P30837 517 aa16.74■□□□□ 0.27
RTFDC1-201ENST00000023939 TTC6Q86TZ1 520 aa16.74■□□□□ 0.27
RTFDC1-201ENST00000023939 AATFQ9NY61 560 aaKnown RBP eCLIP16.74■□□□□ 0.27
RTFDC1-201ENST00000023939 ORC3Q9UBD5 711 aaPredicted RBP16.74■□□□□ 0.27
RTFDC1-201ENST00000023939 ARPP21Q9UBL0 812 aaPredicted RBP16.74■□□□□ 0.27
RTFDC1-201ENST00000023939 SLC12A7Q9Y666 1083 aa16.74■□□□□ 0.27
RTFDC1-201ENST00000023939 FAM205AQ6ZU69 1335 aa16.74■□□□□ 0.27
RTFDC1-201ENST00000023939 TBC1D22AQ8WUA7 517 aa16.73■□□□□ 0.27
RTFDC1-201ENST00000023939 SENP2Q9HC62 589 aa16.73■□□□□ 0.27
RTFDC1-201ENST00000023939 MKRN1Q9UHC7 482 aaKnown RBP16.73■□□□□ 0.27
RTFDC1-201ENST00000023939 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.73■□□□□ 0.27
RTFDC1-201ENST00000023939 STK36Q9NRP7 1315 aa16.73■□□□□ 0.27
RTFDC1-201ENST00000023939 ERICH2A1L162 156 aa16.73■□□□□ 0.27
RTFDC1-201ENST00000023939 CCDC69A6NI79 296 aa16.73■□□□□ 0.27
RTFDC1-201ENST00000023939 USP17L12C9JPN9 530 aa16.73■□□□□ 0.27
RTFDC1-201ENST00000023939 USP17L21D6R901 530 aa16.73■□□□□ 0.27
RTFDC1-201ENST00000023939 WTAPQ15007 396 aa16.73■□□□□ 0.27
RTFDC1-201ENST00000023939 NTRK3Q16288 839 aa16.73■□□□□ 0.27
RTFDC1-201ENST00000023939 POTEAQ6S8J7 498 aa16.73■□□□□ 0.27
RTFDC1-201ENST00000023939 SYNE3Q6ZMZ3 975 aa16.73■□□□□ 0.27
RTFDC1-201ENST00000023939 NFXL1Q6ZNB6 911 aa16.73■□□□□ 0.27
RTFDC1-201ENST00000023939 MASTLQ96GX5 879 aa16.73■□□□□ 0.27
RTFDC1-201ENST00000023939 FAM217BQ9NTX9 383 aaPredicted RBP16.73■□□□□ 0.27
RTFDC1-201ENST00000023939 CFAP45Q9UL16 551 aa16.73■□□□□ 0.27
RTFDC1-201ENST00000023939 BAG3O95817 575 aa16.72■□□□□ 0.27
RTFDC1-201ENST00000023939 ADD1P35611 737 aaKnown RBP16.72■□□□□ 0.27
RTFDC1-201ENST00000023939 PPP2R5BQ15173 497 aa16.72■□□□□ 0.27
RTFDC1-201ENST00000023939 SEC23AQ15436 765 aa16.72■□□□□ 0.27
RTFDC1-201ENST00000023939 RRP12Q5JTH9 1297 aaKnown RBP16.72■□□□□ 0.27
RTFDC1-201ENST00000023939 FAM173BQ6P4H8 233 aa16.72■□□□□ 0.27
RTFDC1-201ENST00000023939 LRSAM1Q6UWE0 723 aa16.72■□□□□ 0.27
RTFDC1-201ENST00000023939 FBXO18Q8NFZ0 1043 aa16.72■□□□□ 0.27
RTFDC1-201ENST00000023939 LEO1Q8WVC0 666 aaPredicted RBP16.72■□□□□ 0.27
RTFDC1-201ENST00000023939 FAM163AQ96GL9 167 aaPredicted RBP16.72■□□□□ 0.27
RTFDC1-201ENST00000023939 GPR101Q96P66 508 aaPredicted RBP16.72■□□□□ 0.27
RTFDC1-201ENST00000023939 CAMKK2Q96RR4 588 aa16.72■□□□□ 0.27
RTFDC1-201ENST00000023939 COA1Q9GZY4 146 aa16.72■□□□□ 0.27
RTFDC1-201ENST00000023939 MROH7-TTC4A0A0A0MT08 1334 aa16.71■□□□□ 0.27
RTFDC1-201ENST00000023939 GOLGA8AA7E2F4 631 aa16.71■□□□□ 0.27
RTFDC1-201ENST00000023939 LETM1O95202 739 aaPredicted RBP16.71■□□□□ 0.27
RTFDC1-201ENST00000023939 SLC3A2P08195 630 aaKnown RBP16.71■□□□□ 0.27
RTFDC1-201ENST00000023939 CDC27P30260 824 aa16.71■□□□□ 0.27
RTFDC1-201ENST00000023939 QSER1Q2KHR3 1735 aa16.71■□□□□ 0.27
RTFDC1-201ENST00000023939 CCDC183Q5T5S1 534 aa16.71■□□□□ 0.27
RTFDC1-201ENST00000023939 C8orf76Q96K31 380 aa16.71■□□□□ 0.27
RTFDC1-201ENST00000023939 SPATA32Q96LK8 384 aa16.71■□□□□ 0.27
RTFDC1-201ENST00000023939 UBAC1Q9BSL1 405 aa16.71■□□□□ 0.27
RTFDC1-201ENST00000023939 TOMM22Q9NS69 142 aa16.71■□□□□ 0.27
RTFDC1-201ENST00000023939 LAMB1P07942 1786 aa16.71■□□□□ 0.27
RTFDC1-201ENST00000023939 MICU3Q86XE3 530 aa16.7■□□□□ 0.26
RTFDC1-201ENST00000023939 PIAS4Q8N2W9 510 aaPredicted RBP16.7■□□□□ 0.26
RTFDC1-201ENST00000023939 JAG2Q9Y219 1238 aa16.7■□□□□ 0.26
RTFDC1-201ENST00000023939 SUGT1Q9Y2Z0 365 aa16.7■□□□□ 0.26
RTFDC1-201ENST00000023939 COL11A2P13942 1736 aaPredicted RBP16.7■□□□□ 0.26
RTFDC1-201ENST00000023939 GPR75-ASB3A0A0A6YYF3 556 aa16.7■□□□□ 0.26
RTFDC1-201ENST00000023939 CCDC196A0A1B0GTZ2 297 aa16.7■□□□□ 0.26
RTFDC1-201ENST00000023939 C6orf229H3BNL8 230 aa16.7■□□□□ 0.26
RTFDC1-201ENST00000023939 IFNAR1P17181 557 aa16.7■□□□□ 0.26
RTFDC1-201ENST00000023939 SLC15A2Q16348 729 aa16.7■□□□□ 0.26
RTFDC1-201ENST00000023939 GRIK5Q16478 980 aa16.7■□□□□ 0.26
RTFDC1-201ENST00000023939 SLF2Q8IX21 1173 aa16.7■□□□□ 0.26
RTFDC1-201ENST00000023939 ZNF396Q96N95 335 aaPredicted RBP16.7■□□□□ 0.26
RTFDC1-201ENST00000023939 ZSCAN10Q96SZ4 725 aaPredicted RBP16.7■□□□□ 0.26
RTFDC1-201ENST00000023939 RTFDC1Q9BY42 306 aaPredicted RBP16.7■□□□□ 0.26
RTFDC1-201ENST00000023939 ROBO3Q96MS0 1386 aa16.7■□□□□ 0.26
RTFDC1-201ENST00000023939 BAZ2AQ9UIF9 1905 aaKnown RBP16.69■□□□□ 0.26
RTFDC1-201ENST00000023939 CYP2D7A0A087X1C5 515 aa16.69■□□□□ 0.26
RTFDC1-201ENST00000023939 STYK1Q6J9G0 422 aa16.69■□□□□ 0.26
RTFDC1-201ENST00000023939 BRAPQ7Z569 592 aa16.69■□□□□ 0.26
RTFDC1-201ENST00000023939 RAB11FIP4Q86YS3 637 aa16.69■□□□□ 0.26
RTFDC1-201ENST00000023939 MPNDQ8N594 471 aa16.69■□□□□ 0.26
RTFDC1-201ENST00000023939 NOL10Q9BSC4 688 aaKnown RBP16.69■□□□□ 0.26
RTFDC1-201ENST00000023939 TFIP11Q9UBB9 837 aaKnown RBP16.69■□□□□ 0.26
RTFDC1-201ENST00000023939 RCOR1Q9UKL0 485 aa16.69■□□□□ 0.26
RTFDC1-201ENST00000023939 EP400Q96L91 3159 aa16.69■□□□□ 0.26
RTFDC1-201ENST00000023939 GAKO14976 1311 aa16.69■□□□□ 0.26
RTFDC1-201ENST00000023939 TNKSO95271 1327 aa16.69■□□□□ 0.26
RTFDC1-201ENST00000023939 SYCE3A1L190 88 aa16.68■□□□□ 0.26
RTFDC1-201ENST00000023939 SMIM22K7EJ46 135 aa16.68■□□□□ 0.26
RTFDC1-201ENST00000023939 FMNL1O95466 1100 aaPredicted RBP16.68■□□□□ 0.26
RTFDC1-201ENST00000023939 PLCG2P16885 1265 aa16.68■□□□□ 0.26
RTFDC1-201ENST00000023939 IARSP41252 1262 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms