RNA–Protein interactions for RNA: ENST00000009180.8

CD9-201, Transcript of CD9 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD9, Length 1,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-201ENST00000009180 AK9Q5TCS8 1911 aa12.13□□□□□ -0.47
CD9-201ENST00000009180 PITPNM2Q9BZ72 1349 aa12.12□□□□□ -0.47
CD9-201ENST00000009180 GPAA1O43292 621 aa12.12□□□□□ -0.47
CD9-201ENST00000009180 RASA3Q14644 834 aa12.12□□□□□ -0.47
CD9-201ENST00000009180 LRRFIP1Q32MZ4 808 aaKnown RBP12.12□□□□□ -0.47
CD9-201ENST00000009180 TMED8Q6PL24 325 aaPredicted RBP12.12□□□□□ -0.47
CD9-201ENST00000009180 CWC27Q6UX04 472 aaKnown RBP12.12□□□□□ -0.47
CD9-201ENST00000009180 ZNF589Q86UQ0 364 aaPredicted RBP12.12□□□□□ -0.47
CD9-201ENST00000009180 SULF1Q8IWU6 871 aa12.12□□□□□ -0.47
CD9-201ENST00000009180 RBM46Q8TBY0 533 aaKnown RBP12.12□□□□□ -0.47
CD9-201ENST00000009180 TGFBRAP1Q8WUH2 860 aa12.12□□□□□ -0.47
CD9-201ENST00000009180 SDR42E1Q8WUS8 393 aa12.12□□□□□ -0.47
CD9-201ENST00000009180 AIDAQ96BJ3 306 aa12.12□□□□□ -0.47
CD9-201ENST00000009180 TMEM39BQ9GZU3 492 aa12.12□□□□□ -0.47
CD9-201ENST00000009180 DEFB129Q9H1M3 183 aa12.12□□□□□ -0.47
CD9-201ENST00000009180 FLT1P17948 1338 aa12.11□□□□□ -0.47
CD9-201ENST00000009180 SSC5DA1L4H1 1573 aa12.11□□□□□ -0.47
CD9-201ENST00000009180 ITGBL1O95965 494 aaPredicted RBP12.11□□□□□ -0.47
CD9-201ENST00000009180 SLURP2P0DP57 97 aa12.11□□□□□ -0.47
CD9-201ENST00000009180 PLCG2P16885 1265 aa12.11□□□□□ -0.47
CD9-201ENST00000009180 CHMLP26374 656 aa12.11□□□□□ -0.47
CD9-201ENST00000009180 USP5P45974 858 aa12.11□□□□□ -0.47
CD9-201ENST00000009180 CDC37L1Q7L3B6 337 aa12.11□□□□□ -0.47
CD9-201ENST00000009180 SH3BP5LQ7L8J4 393 aa12.11□□□□□ -0.47
CD9-201ENST00000009180 SMC1BQ8NDV3 1235 aa12.11□□□□□ -0.47
CD9-201ENST00000009180 CDCA5Q96FF9 252 aa12.11□□□□□ -0.47
CD9-201ENST00000009180 STRBPQ96SI9 672 aaKnown RBP12.11□□□□□ -0.47
CD9-201ENST00000009180 IDI2Q9BXS1 227 aa12.11□□□□□ -0.47
CD9-201ENST00000009180 CRNKL1Q9BZJ0 848 aaKnown RBP12.11□□□□□ -0.47
CD9-201ENST00000009180 SAP30BPQ9UHR5 308 aaKnown RBP12.11□□□□□ -0.47
CD9-201ENST00000009180 SLC4A4Q9Y6R1 1079 aa12.11□□□□□ -0.47
CD9-201ENST00000009180 CDK5RAP2Q96SN8 1893 aa12.1□□□□□ -0.47
CD9-201ENST00000009180 FOXP2O15409 715 aa12.1□□□□□ -0.47
CD9-201ENST00000009180 EVX2Q03828 476 aa12.1□□□□□ -0.47
CD9-201ENST00000009180 TNFAIP1Q13829 316 aa12.1□□□□□ -0.47
CD9-201ENST00000009180 VPS53Q5VIR6 699 aa12.1□□□□□ -0.47
CD9-201ENST00000009180 TEPSINQ96N21 525 aa12.1□□□□□ -0.47
CD9-201ENST00000009180 ZNF408Q9H9D4 720 aa12.1□□□□□ -0.47
CD9-201ENST00000009180 HELLSQ9NRZ9 838 aa12.1□□□□□ -0.47
CD9-201ENST00000009180 FZD1Q9UP38 647 aa12.1□□□□□ -0.47
CD9-201ENST00000009180 DDX60LQ5H9U9 1706 aaKnown RBP12.1□□□□□ -0.47
CD9-201ENST00000009180 NAV1Q8NEY1 1877 aa12.1□□□□□ -0.47
CD9-201ENST00000009180 DDTLA6NHG4 134 aaPredicted RBP12.09□□□□□ -0.47
CD9-201ENST00000009180 HIP1O00291 1037 aa12.09□□□□□ -0.47
CD9-201ENST00000009180 ENTPD3O75355 529 aa12.09□□□□□ -0.47
CD9-201ENST00000009180 TNNI2P48788 182 aa12.09□□□□□ -0.47
CD9-201ENST00000009180 MCMDC2Q4G0Z9 681 aa12.09□□□□□ -0.47
CD9-201ENST00000009180 NBPF12Q5TAG4 269 aaPredicted RBP12.09□□□□□ -0.47
CD9-201ENST00000009180 FKBP1CQ5VVH2 108 aa12.09□□□□□ -0.47
CD9-201ENST00000009180 FAM83AQ86UY5 434 aa12.09□□□□□ -0.47
CD9-201ENST00000009180 FAM151AQ8WW52 585 aa12.09□□□□□ -0.47
CD9-201ENST00000009180 OSBPL5Q9H0X9 879 aaPredicted RBP12.09□□□□□ -0.47
CD9-201ENST00000009180 EPB41L4AQ9HCS5 686 aaPredicted RBP12.09□□□□□ -0.47
CD9-201ENST00000009180 FOCADQ5VW36 1801 aa12.09□□□□□ -0.47
CD9-201ENST00000009180 CCDC171Q6TFL3 1326 aa12.09□□□□□ -0.47
CD9-201ENST00000009180 CYP2D7A0A087X1C5 515 aa12.08□□□□□ -0.48
CD9-201ENST00000009180 GSG1L2A8MUP6 293 aa12.08□□□□□ -0.48
CD9-201ENST00000009180 CDC45O75419 566 aa12.08□□□□□ -0.48
CD9-201ENST00000009180 CYP2D6P10635 497 aa12.08□□□□□ -0.48
CD9-201ENST00000009180 CERS3Q8IU89 383 aa12.08□□□□□ -0.48
CD9-201ENST00000009180 ZSCAN29Q8IWY8 852 aaPredicted RBP12.08□□□□□ -0.48
CD9-201ENST00000009180 DCP1AQ9NPI6 582 aaPredicted RBP12.08□□□□□ -0.48
CD9-201ENST00000009180 PALD1Q9ULE6 856 aa12.08□□□□□ -0.48
CD9-201ENST00000009180 PASKQ96RG2 1323 aa12.08□□□□□ -0.48
CD9-201ENST00000009180 RPAP1Q9BWH6 1393 aaPredicted RBP12.07□□□□□ -0.48
CD9-201ENST00000009180 POLR2AP24928 1970 aaKnown RBP12.07□□□□□ -0.48
CD9-201ENST00000009180 FAM196BA6NMK8 535 aa12.07□□□□□ -0.48
CD9-201ENST00000009180 SMIM22K7EJ46 135 aa12.07□□□□□ -0.48
CD9-201ENST00000009180 FSTL1Q12841 308 aa12.07□□□□□ -0.48
CD9-201ENST00000009180 PRKG1Q13976 671 aa12.07□□□□□ -0.48
CD9-201ENST00000009180 MOB2Q70IA6 237 aa12.07□□□□□ -0.48
CD9-201ENST00000009180 TICAM2Q86XR7 235 aa12.07□□□□□ -0.48
CD9-201ENST00000009180 CSRNP1Q96S65 589 aa12.07□□□□□ -0.48
CD9-201ENST00000009180 ESYT1Q9BSJ8 1104 aa12.07□□□□□ -0.48
CD9-201ENST00000009180 MKRN1Q9UHC7 482 aaKnown RBP12.07□□□□□ -0.48
CD9-201ENST00000009180 PPP2R3BQ9Y5P8 575 aa12.07□□□□□ -0.48
CD9-201ENST00000009180 COL2A1P02458 1487 aaPredicted RBP12.07□□□□□ -0.48
CD9-201ENST00000009180 ATRNL1Q5VV63 1379 aa12.06□□□□□ -0.48
CD9-201ENST00000009180 SGSM2O43147 1006 aa12.06□□□□□ -0.48
CD9-201ENST00000009180 CELF2O95319 508 aaKnown RBP12.06□□□□□ -0.48
CD9-201ENST00000009180 APPP05067 770 aa12.06□□□□□ -0.48
CD9-201ENST00000009180 MIGA2Q7L4E1 593 aa12.06□□□□□ -0.48
CD9-201ENST00000009180 ATP8A2Q9NTI2 1148 aa12.06□□□□□ -0.48
CD9-201ENST00000009180 MCM9Q9NXL9 1143 aa12.06□□□□□ -0.48
CD9-201ENST00000009180 SIPA1L1O43166 1804 aa12.06□□□□□ -0.48
CD9-201ENST00000009180 RAD50Q92878 1312 aa12.06□□□□□ -0.48
CD9-201ENST00000009180 USP17L12C9JPN9 530 aa12.05□□□□□ -0.48
CD9-201ENST00000009180 USP17L21D6R901 530 aa12.05□□□□□ -0.48
CD9-201ENST00000009180 GNAT2P19087 354 aa12.05□□□□□ -0.48
CD9-201ENST00000009180 TDO2P48775 406 aa12.05□□□□□ -0.48
CD9-201ENST00000009180 PLCD1P51178 756 aa12.05□□□□□ -0.48
CD9-201ENST00000009180 CST9Q5W186 159 aa12.05□□□□□ -0.48
CD9-201ENST00000009180 CTR9Q6PD62 1173 aa12.05□□□□□ -0.48
CD9-201ENST00000009180 RUFY2Q8WXA3 655 aa12.05□□□□□ -0.48
CD9-201ENST00000009180 BAZ2AQ9UIF9 1905 aaKnown RBP12.04□□□□□ -0.48
CD9-201ENST00000009180 PATL2C9JE40 543 aaKnown RBP12.04□□□□□ -0.48
CD9-201ENST00000009180 POLR3DP05423 398 aaPredicted RBP12.04□□□□□ -0.48
CD9-201ENST00000009180 HSPD1P10809 573 aaKnown RBP12.04□□□□□ -0.48
CD9-201ENST00000009180 PTH1RQ03431 593 aa12.04□□□□□ -0.48
CD9-201ENST00000009180 TTLL12Q14166 644 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms