RNA–Protein interactions for RNA: ENSMUST00000171342.2

Rnf41-202, Transcript of E3 ubiquitin-protein ligase NRDP1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf41, Length 3,283 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf41-202ENSMUST00000171342 Klf15Q9EPW2 415 aa11.37□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Tfcp2Q9ERA0 502 aa11.37□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Greb1lB9EJV3 1913 aa11.37□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Col3a1P08121 1464 aa11.37□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Atp6v0a2P15920 856 aa11.37□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Hps3Q91VB4 1002 aa11.37□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Gtf2iQ9ESZ8 998 aaKnown RBP11.37□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Bin1O08539 588 aaKnown RBP11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Atp6v1aP50516 617 aaKnown RBP11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Prpf4bQ61136 1007 aaKnown RBP11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Tbc1d5Q80XQ2 815 aa11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Znf18Q810A1 556 aa11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Pramel6Q810Y9 485 aa11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Triml1Q8BVP1 470 aa11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Q8C6G1 249 aa11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Pus7lQ8CE46 702 aa11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Pcdhb15Q91Y04 786 aa11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Znfx1Q8R151 1909 aaKnown RBP11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Kif3aP28741 701 aa11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Foxp1P58462 705 aa11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 1700013D24RikQ0P521 120 aa11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Cep63Q3UPP8 700 aa11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Usp50Q6P8X6 390 aa11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Glis3Q6XP49 780 aa11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Znf653Q6YND2 615 aa11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Ttll4Q80UG8 1193 aa11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Tmem179Q8BHH9 233 aa11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Paf1Q8K2T8 535 aa11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Wasf1Q8R5H6 559 aa11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Ubxn4Q8VCH8 506 aa11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 MlphQ91V27 590 aa11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Gpr108Q91WD0 569 aa11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Acot9Q9R0X4 439 aaKnown RBP11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Nfe2l3Q9WTM4 660 aa11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 EvplQ9D952 2035 aa11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Tbc1d8bA3KGB4 1114 aa11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Myo1bP46735 1107 aa11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 QarsQ8BML9 775 aa11.36□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Naaladl2A0A0N4SUJ3 795 aa11.35□□□□□ -0.59
Rnf41-202ENSMUST00000171342 A0A1Y7VML8 143 aa11.35□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Gm3893E9Q1I1 302 aa11.35□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Chrna5Q2MKA5 467 aa11.35□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Gm28047Q3US59 414 aa11.35□□□□□ -0.59
Rnf41-202ENSMUST00000171342 MycbpapQ5SUV2 932 aa11.35□□□□□ -0.59
Rnf41-202ENSMUST00000171342 E4f1Q8CCE9 783 aa11.35□□□□□ -0.59
Rnf41-202ENSMUST00000171342 ParnQ8VDG3 624 aa11.35□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Zkscan7E9PVW1 718 aa11.35□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Aknad1E9Q8N6 675 aa11.35□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Sirt2Q8VDQ8 389 aa11.35□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Myo3bQ1EG27 1305 aa11.35□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Prdm11A2AGX3 565 aa11.34□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Aak1Q3UHJ0 959 aa11.34□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Kif22Q3V300 660 aa11.34□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Mdh1bQ5F204 500 aa11.34□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Cep131Q62036 1060 aa11.34□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Ankrd13aQ80UP5 588 aa11.34□□□□□ -0.59
Rnf41-202ENSMUST00000171342 DlatQ8BMF4 642 aa11.34□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Mmel1Q9JLI3 765 aa11.34□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Stk39Q9Z1W9 556 aa11.34□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Pramel3A2AHA7 463 aa11.34□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Gm7903A2AWL1 463 aa11.34□□□□□ -0.59
Rnf41-202ENSMUST00000171342 AV320801A2AWL3 467 aa11.34□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Zscan29E9Q5B4 869 aa11.34□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Gm15023L7MUB4 467 aa11.34□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Pank2Q3U4S0 443 aa11.34□□□□□ -0.59
Rnf41-202ENSMUST00000171342 1700018B08RikQ9DA83 213 aa11.34□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Adgra3Q7TT36 1310 aa11.34□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Fbln2P37889 1221 aa11.34□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Traf3ip1Q149C2 625 aa11.34□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Trmt44Q9D2Q2 713 aa11.34□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Add3Q9QYB5 706 aaKnown RBP11.34□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Tcof1O08784 1320 aaKnown RBP11.34□□□□□ -0.59
Rnf41-202ENSMUST00000171342 Ccdc173A0JLY1 547 aa11.33□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Kmt5bQ3U8K7 883 aa11.33□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Fez1Q8K0X8 392 aa11.33□□□□□ -0.6
Rnf41-202ENSMUST00000171342 CpdO89001 1377 aa11.33□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Skap1Q3UUV5 355 aa11.33□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Ces3aQ63880 571 aa11.33□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Mknk2Q8CDB0 459 aa11.33□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Ces3bQ8VCU1 571 aa11.33□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Epb41l3Q9WV92 929 aa11.33□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Clip2Q9Z0H8 1047 aa11.33□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Aox3G3X982 1335 aa11.33□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Gm36210A0A1B0GS00 229 aa11.33□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Prpf38aQ4FK66 312 aaKnown RBP11.33□□□□□ -0.6
Rnf41-202ENSMUST00000171342 VmacQ8BP01 174 aa11.33□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Ube2q2Q8K2Z8 378 aa11.33□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Vps16Q920Q4 839 aa11.33□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Bap1Q99PU7 728 aa11.33□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Etnk1Q9D4V0 363 aa11.33□□□□□ -0.6
Rnf41-202ENSMUST00000171342 RabggtaQ9JHK4 567 aa11.33□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Col20a1Q923P0 1320 aa11.32□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Duox1A2AQ92 1551 aa11.32□□□□□ -0.6
Rnf41-202ENSMUST00000171342 VrtnQ3SYK4 740 aa11.32□□□□□ -0.6
Rnf41-202ENSMUST00000171342 UvssaQ9D479 717 aa11.32□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Cyp2ab1S4R196 498 aa11.32□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Wdr19Q3UGF1 1341 aa11.32□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Sall1Q9ER74 1322 aa11.32□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Rgs12Q8CGE9 1381 aa11.32□□□□□ -0.6
Rnf41-202ENSMUST00000171342 Lama4P97927 1816 aa11.32□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms