RNA–Protein interactions for RNA: ENSMUST00000156290.8

Ttc28-206, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ttc28, Length 10,688 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-206ENSMUST00000156290 Lrrc2Q8VDB8 371 aa10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 Cul5Q9D5V5 780 aa10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 Kdm5cP41230 1554 aa10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 Metap2O08663 478 aaKnown RBP10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 Q8BZJ8 459 aa10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 Krt25Q8VCW2 446 aa10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 EcsitQ9QZH6 435 aa10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 Lrrc7Q80TE7 1490 aa10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 Fmn2Q9JL04 1578 aa10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 Gm1993A6X8I0 212 aa10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 SlxD3Z347 212 aa10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 Zfpm1O35615 995 aa10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 Parp2O88554 559 aa10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 Wdr44Q6NVE8 915 aa10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 Gm21985Q6P6P5 1106 aa10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 Ano1Q8BHY3 960 aa10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 P3h4Q8K2B0 443 aa10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 Rufy3Q9D394 469 aa10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 Stag1Q9D3E6 1258 aa10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 Ccdc97Q9DBT3 340 aa10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 Bfsp1A2AMT1 669 aa10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 Kif14L0N7N1 1674 aaKnown RBP10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 Hoxb7P09024 217 aa10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 Sh3d21Q7TSG5 549 aa10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 MthfsQ9D110 203 aa10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 Retreg2Q6NS82 541 aa10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 SympkQ80X82 1284 aa10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 Vps33aQ9D2N9 598 aa10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 Exoc1Q8R3S6 894 aa10.34□□□□□ -0.75
Ttc28-206ENSMUST00000156290 Rbm8a2A0A0N4SUH6 174 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Cnnm2Q3TWN3 875 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Eif3cQ8R1B4 911 aaKnown RBP10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Dhx30Q99PU8 1217 aaKnown RBP10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Rbm8aQ9CWZ3 174 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Tuft1O08970 390 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Fam213aQ9CYH2 218 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Klhl40Q9D783 621 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Akr1c19G3X9Y6 323 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Lonp2Q9DBN5 852 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Plch2A2AP18 1501 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Cdcp1Q5U462 833 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Ccdc28aQ8CEI3 192 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 RtcbQ99LF4 505 aaKnown RBP10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Sar1bQ9CQC9 198 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 AmfrQ9R049 643 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Abcc6Q9R1S7 1498 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Prkg1P0C605 671 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Gm28047Q3US59 414 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Dhx38Q80X98 1228 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Eif2b5Q8CHW4 717 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Hfm1D3Z4R1 1434 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Spocd1B1ASB6 936 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Sept7O55131 436 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Ets1P27577 440 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Edc3Q8K2D3 508 aaKnown RBP10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 NeblQ0II04 452 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Lrrc8aQ80WG5 810 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Nlgn1Q99K10 843 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Antxr1Q9CZ52 562 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Ndufa8Q9DCJ5 172 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Skint5A7XUY5 1461 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Slc1a4O35874 532 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Cers3Q1A3B0 383 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Bsdc1Q80Y55 427 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Ankrd2Q9WV06 328 aa10.33□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Flot1O08917 428 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Pde11aP0C1Q2 933 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Rnf40Q3U319 1001 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Irs4Q9Z0Y7 1216 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Zswim4Q8C7B8 1101 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Pacsin2Q9WVE8 486 aaKnown RBP10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 SpertQ32MG2 446 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Prdm1Q60636 856 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 DlatQ8BMF4 642 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Gtpbp10Q8K013 366 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Tbc1d8bA3KGB4 1114 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Eif6O55135 245 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Ppp1r12cQ3UMT1 782 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Large2Q5XPT3 690 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Spata2Q8K004 515 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Slx4ipQ9D7Y9 413 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Nsd3Q6P2L6 1439 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Vamp4O70480 141 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Fam207aP58468 219 aaKnown RBP10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Traf3ip1Q149C2 625 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Wdr70Q3TWF6 657 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Nedd9O35177 833 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Dnm1P39053 867 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Sept2P42208 361 aaKnown RBP10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Atp8b2P98199 1209 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Mcur1Q9CXD6 340 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Tacc2Q9JJG0 1149 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Timm10P62073 90 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Rbm12b2Q66JV4 834 aaKnown RBP10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 U2af1l4Q8BGJ9 220 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Stac3Q8BZ71 360 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Cdan1Q8CC12 1239 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Cyp27a1Q9DBG1 533 aa10.32□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Zkscan16A2ALW2 728 aa10.31□□□□□ -0.76
Ttc28-206ENSMUST00000156290 Zfp213E9QAW0 468 aa10.31□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 57.4 ms