RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Ufl1Q8CCJ3 793 aaKnown RBP13.18□□□□□ -0.3
Vps54-202ENSMUST00000109578 Ccdc150Q8CDI7 1110 aa13.18□□□□□ -0.3
Vps54-202ENSMUST00000109578 Rtn1Q8K0T0 780 aa13.18□□□□□ -0.3
Vps54-202ENSMUST00000109578 Desi2Q9D291 194 aa13.18□□□□□ -0.3
Vps54-202ENSMUST00000109578 Cnpy3Q9DAU1 276 aa13.18□□□□□ -0.3
Vps54-202ENSMUST00000109578 Clstn1Q9EPL2 979 aa13.18□□□□□ -0.3
Vps54-202ENSMUST00000109578 Nek3Q9R0A5 511 aa13.18□□□□□ -0.3
Vps54-202ENSMUST00000109578 Ssc5dQ8BV57 1371 aa13.18□□□□□ -0.3
Vps54-202ENSMUST00000109578 Myh7Q91Z83 1935 aa13.18□□□□□ -0.3
Vps54-202ENSMUST00000109578 Dctn1O08788 1281 aa13.18□□□□□ -0.3
Vps54-202ENSMUST00000109578 Slc38a10Q5I012 1090 aa13.18□□□□□ -0.3
Vps54-202ENSMUST00000109578 Il17raQ60943 864 aa13.18□□□□□ -0.3
Vps54-202ENSMUST00000109578 Hic2Q9JLZ6 619 aaKnown RBP13.18□□□□□ -0.3
Vps54-202ENSMUST00000109578 Ovgp1Q62010 721 aa13.18□□□□□ -0.3
Vps54-202ENSMUST00000109578 RbsnQ80Y56 783 aa13.18□□□□□ -0.3
Vps54-202ENSMUST00000109578 Necab1Q8BG18 352 aa13.18□□□□□ -0.3
Vps54-202ENSMUST00000109578 Slx1bQ8BX32 270 aa13.18□□□□□ -0.3
Vps54-202ENSMUST00000109578 Nek9Q8K1R7 984 aa13.18□□□□□ -0.3
Vps54-202ENSMUST00000109578 Tmx1Q8VBT0 278 aa13.18□□□□□ -0.3
Vps54-202ENSMUST00000109578 Plbd2Q3TCN2 594 aa13.17□□□□□ -0.3
Vps54-202ENSMUST00000109578 Spag5Q7TME2 1165 aa13.17□□□□□ -0.3
Vps54-202ENSMUST00000109578 Asnsd1Q8BFS9 627 aa13.17□□□□□ -0.3
Vps54-202ENSMUST00000109578 Tgs1Q923W1 853 aa13.17□□□□□ -0.3
Vps54-202ENSMUST00000109578 Ccdc39Q9D5Y1 937 aa13.17□□□□□ -0.3
Vps54-202ENSMUST00000109578 Baiap2l1Q9DBJ3 514 aa13.17□□□□□ -0.3
Vps54-202ENSMUST00000109578 Bcl9lQ67FY2 1494 aa13.17□□□□□ -0.3
Vps54-202ENSMUST00000109578 Ccdc121E9Q6D3 323 aa13.17□□□□□ -0.3
Vps54-202ENSMUST00000109578 Eif5P59325 429 aaKnown RBP13.17□□□□□ -0.3
Vps54-202ENSMUST00000109578 Mcm6P97311 821 aa13.17□□□□□ -0.3
Vps54-202ENSMUST00000109578 MpndQ3TV65 487 aa13.17□□□□□ -0.3
Vps54-202ENSMUST00000109578 Ankk1Q8BZ25 745 aa13.17□□□□□ -0.3
Vps54-202ENSMUST00000109578 BaatQ91X34 420 aa13.17□□□□□ -0.3
Vps54-202ENSMUST00000109578 WtapQ9ER69 396 aa13.17□□□□□ -0.3
Vps54-202ENSMUST00000109578 Bag1Q60739 355 aa13.17□□□□□ -0.3
Vps54-202ENSMUST00000109578 Ppp2r2cQ8BG02 447 aa13.17□□□□□ -0.3
Vps54-202ENSMUST00000109578 Hps6Q8BLY7 805 aa13.17□□□□□ -0.3
Vps54-202ENSMUST00000109578 Cbx6Q9DBY5 414 aa13.17□□□□□ -0.3
Vps54-202ENSMUST00000109578 Plekho1Q9JIY0 408 aa13.17□□□□□ -0.3
Vps54-202ENSMUST00000109578 Stk39Q9Z1W9 556 aa13.17□□□□□ -0.3
Vps54-202ENSMUST00000109578 Phlpp1Q8CHE4 1687 aa13.17□□□□□ -0.3
Vps54-202ENSMUST00000109578 H2afxP27661 143 aaKnown RBP13.16□□□□□ -0.3
Vps54-202ENSMUST00000109578 Csrnp2Q8BGQ2 534 aa13.16□□□□□ -0.3
Vps54-202ENSMUST00000109578 GdaQ9R111 454 aa13.16□□□□□ -0.3
Vps54-202ENSMUST00000109578 Gm4340L7N2C4 268 aa13.16□□□□□ -0.3
Vps54-202ENSMUST00000109578 Sdc2P43407 202 aa13.16□□□□□ -0.3
Vps54-202ENSMUST00000109578 Gabpb2P81069 414 aa13.16□□□□□ -0.3
Vps54-202ENSMUST00000109578 Fam89aQ14BJ1 175 aa13.16□□□□□ -0.3
Vps54-202ENSMUST00000109578 Q66JV7 365 aa13.16□□□□□ -0.3
Vps54-202ENSMUST00000109578 ChmQ9QXG2 665 aa13.16□□□□□ -0.3
Vps54-202ENSMUST00000109578 NefhP19246 1090 aa13.16□□□□□ -0.3
Vps54-202ENSMUST00000109578 Wnt7aP24383 349 aa13.16□□□□□ -0.3
Vps54-202ENSMUST00000109578 Slc44a1Q6X893 653 aa13.16□□□□□ -0.3
Vps54-202ENSMUST00000109578 Susd4Q8BH32 490 aa13.16□□□□□ -0.3
Vps54-202ENSMUST00000109578 Wdr3Q8BHB4 942 aaKnown RBP13.16□□□□□ -0.3
Vps54-202ENSMUST00000109578 Tab2Q99K90 693 aa13.16□□□□□ -0.3
Vps54-202ENSMUST00000109578 Ktn1Q61595 1327 aaKnown RBP13.16□□□□□ -0.3
Vps54-202ENSMUST00000109578 Gng11P61953 73 aa13.16□□□□□ -0.3
Vps54-202ENSMUST00000109578 PsdQ5DTT2 1024 aa13.16□□□□□ -0.3
Vps54-202ENSMUST00000109578 Cyp4x1Q6A152 507 aa13.16□□□□□ -0.3
Vps54-202ENSMUST00000109578 Ulbp1Q8HWA3 334 aa13.16□□□□□ -0.3
Vps54-202ENSMUST00000109578 Fam76aQ922G2 307 aa13.16□□□□□ -0.3
Vps54-202ENSMUST00000109578 Iqca1Q9CUL5 857 aa13.16□□□□□ -0.3
Vps54-202ENSMUST00000109578 Il7P10168 154 aa13.15□□□□□ -0.3
Vps54-202ENSMUST00000109578 Trak2Q6P9N8 913 aa13.15□□□□□ -0.3
Vps54-202ENSMUST00000109578 Clec16aQ80U30 1036 aa13.15□□□□□ -0.3
Vps54-202ENSMUST00000109578 Terb1Q8C0V1 768 aa13.15□□□□□ -0.3
Vps54-202ENSMUST00000109578 AW822073A0A0N4SUK1 652 aa13.15□□□□□ -0.3
Vps54-202ENSMUST00000109578 Phldb3E9QAF4 648 aa13.15□□□□□ -0.3
Vps54-202ENSMUST00000109578 PnnO35691 725 aaKnown RBP13.15□□□□□ -0.3
Vps54-202ENSMUST00000109578 Ess2O70279 479 aa13.15□□□□□ -0.3
Vps54-202ENSMUST00000109578 Slc7a1Q09143 622 aa13.15□□□□□ -0.3
Vps54-202ENSMUST00000109578 Specc1lQ2KN98 1118 aaKnown RBP13.15□□□□□ -0.3
Vps54-202ENSMUST00000109578 Ckap2Q3V1H1 664 aa13.15□□□□□ -0.3
Vps54-202ENSMUST00000109578 Mns1Q61884 491 aa13.15□□□□□ -0.3
Vps54-202ENSMUST00000109578 Ttc12Q8BW49 704 aa13.15□□□□□ -0.3
Vps54-202ENSMUST00000109578 ZgpatQ8VDM1 511 aa13.15□□□□□ -0.3
Vps54-202ENSMUST00000109578 Gpr108Q91WD0 569 aa13.15□□□□□ -0.3
Vps54-202ENSMUST00000109578 Speer4dL7N216 212 aa13.15□□□□□ -0.3
Vps54-202ENSMUST00000109578 Ampd3O08739 766 aa13.15□□□□□ -0.3
Vps54-202ENSMUST00000109578 Evc2Q8K1G2 1220 aa13.15□□□□□ -0.3
Vps54-202ENSMUST00000109578 Prr5lA2AVJ5 370 aa13.14□□□□□ -0.31
Vps54-202ENSMUST00000109578 Nek1P51954 1203 aa13.14□□□□□ -0.31
Vps54-202ENSMUST00000109578 Olfr119Q7TRJ5 321 aa13.14□□□□□ -0.31
Vps54-202ENSMUST00000109578 Fam53cQ8BXQ8 393 aa13.14□□□□□ -0.31
Vps54-202ENSMUST00000109578 Shank3Q4ACU6 1730 aa13.14□□□□□ -0.31
Vps54-202ENSMUST00000109578 Cd3dP04235 173 aa13.14□□□□□ -0.31
Vps54-202ENSMUST00000109578 Siah1aP61092 282 aa13.14□□□□□ -0.31
Vps54-202ENSMUST00000109578 Slc27a1Q60714 646 aa13.14□□□□□ -0.31
Vps54-202ENSMUST00000109578 Drc7Q6V3W6 876 aa13.14□□□□□ -0.31
Vps54-202ENSMUST00000109578 Spata32Q8C5V0 334 aa13.14□□□□□ -0.31
Vps54-202ENSMUST00000109578 Tmem143Q8VD26 458 aa13.14□□□□□ -0.31
Vps54-202ENSMUST00000109578 Tspyl4Q8VD63 406 aa13.14□□□□□ -0.31
Vps54-202ENSMUST00000109578 Washc1Q8VDD8 475 aa13.14□□□□□ -0.31
Vps54-202ENSMUST00000109578 FliiQ9JJ28 1271 aa13.14□□□□□ -0.31
Vps54-202ENSMUST00000109578 Nav1Q8CH77 1875 aa13.14□□□□□ -0.31
Vps54-202ENSMUST00000109578 Frmd7A2AD83 703 aa13.14□□□□□ -0.31
Vps54-202ENSMUST00000109578 Pde11aP0C1Q2 933 aa13.14□□□□□ -0.31
Vps54-202ENSMUST00000109578 Kmt5bQ3U8K7 883 aa13.14□□□□□ -0.31
Vps54-202ENSMUST00000109578 Brd3Q8K2F0 726 aaKnown RBP13.14□□□□□ -0.31
Vps54-202ENSMUST00000109578 Ddx54Q8K4L0 874 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms