RNA–Protein interactions for RNA: ENSMUST00000070487.11

Cpsf4-201, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

TSL 1 (best) BASIC

Gene Cpsf4, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-201ENSMUST00000070487 Slc9c1Q6UJY2 1175 aa29.4■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Cog5Q8C0L8 829 aa29.4■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 MlphQ91V27 590 aa29.4■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 HibadhQ99L13 335 aaKnown RBP29.4■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 XdhQ00519 1335 aa29.39■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Hsp90b1P08113 802 aaKnown RBP29.39■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Ccdc39Q9D5Y1 937 aa29.39■■■□□ 2.3
Cpsf4-201ENSMUST00000070487 Mmp20P57748 482 aa29.38■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 Alx1Q8C8B0 326 aa29.38■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 Sulf1Q8K007 870 aa29.38■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 EspnQ9ET47 871 aa29.38■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 Trpv1Q704Y3 839 aa29.38■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 Nek4Q9Z1J2 792 aa29.38■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 Plxnb2B2RXS4 1842 aa29.37■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 Zdbf2Q5SS00 2493 aaKnown RBP29.37■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 Ncf1Q09014 390 aa29.37■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 Ctr9Q62018 1173 aaKnown RBP29.37■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 Bcs1lQ9CZP5 418 aa29.37■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 AfdnQ9QZQ1 1820 aaKnown RBP29.36■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 Plekhg2Q6KAU7 1340 aa29.36■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 Ddx55Q6ZPL9 600 aaKnown RBP29.36■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 Snapc2Q91XA5 359 aa29.36■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 Dennd3A2RT67 1274 aa29.35■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 Pdia3P27773 505 aaKnown RBP29.35■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 Hspd1P63038 573 aaKnown RBP29.35■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 GrapQ9CX99 217 aa29.35■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 Fam205a1D3YZF6 1314 aa29.35■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 Palm3A2TJV2 734 aa29.34■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 Vmn2r68L7N2B3 851 aa29.34■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 NapbP28663 298 aa29.34■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 Micall1Q8BGT6 870 aa29.34■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 Slc4a7Q8BTY2 1034 aa29.34■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 Kcnq3Q8K3F6 873 aa29.34■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 HelbQ6NVF4 1074 aa29.34■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 KhnynQ80U38 671 aa29.34■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 Phf20l1Q8CCJ9 1013 aa29.34■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 Myh2G3UW82 1942 aa29.33■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 MccE9PWI3 1003 aa29.33■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 Slc4a3P16283 1227 aa29.33■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 OsbpQ3B7Z2 805 aa29.33■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 Stxbp2Q64324 593 aa29.33■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 StrbpQ91WM1 672 aaKnown RBP29.33■■■□□ 2.29
Cpsf4-201ENSMUST00000070487 Il7P10168 154 aa29.32■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Serpinb2P12388 415 aa29.32■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Sh2d1b2Q45HK4 132 aa29.32■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Tut1Q8R3F9 869 aa29.32■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Styxl1Q9DAR2 321 aa29.32■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Irx3P81067 507 aa29.31■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 VrtnQ3SYK4 740 aa29.31■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Ddx49Q4FZF3 480 aaKnown RBP29.31■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Fxr1Q61584 677 aaKnown RBP29.31■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 CtshP49935 333 aa29.31■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 VwdeQ6DFV8 926 aa29.31■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Olfr118Q7TRJ6 321 aa29.31■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Ttll4Q80UG8 1193 aa29.3■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Il31raQ8K5B1 716 aa29.3■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Gpsm2Q8VDU0 679 aa29.3■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Znf667Q2TL60 609 aa29.29■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Zfp953Q3UPV7 304 aa29.29■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Rasa3Q60790 834 aa29.29■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Top1mtQ8R4U6 593 aa29.29■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Gm42688A0A0R3P9D1 673 aa29.28■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Pagr1bF6V0H0 108 aa29.28■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Tfcp2l1Q3UNW5 479 aa29.28■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Ccdc142Q8CAI1 738 aa29.28■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Supt16hQ920B9 1047 aa29.28■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Pagr1aQ99L02 253 aa29.28■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Tjap1Q9DCD5 539 aa29.28■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Spata5Q3UMC0 893 aaKnown RBP29.27■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 D630036H23RikQ3UQD6 204 aa29.27■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Tbc1d9Q3UYK3 1264 aa29.27■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Foxn1Q61575 648 aa29.27■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Senp6Q6P7W0 1132 aa29.27■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Trnp1Q80ZI1 223 aa29.27■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Ttc12Q8BW49 704 aa29.27■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Dynll2Q9D0M5 89 aa29.27■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Col2a1P28481 1487 aa29.27■■■□□ 2.28
Cpsf4-201ENSMUST00000070487 Anapc15-psA0A140T8L6 141 aa29.26■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Zmynd8A2A484 1235 aaKnown RBP29.25■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Ano3A2AHL1 981 aa29.25■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Armc3A2AU72 881 aa29.25■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Tfip11Q9ERA6 838 aaKnown RBP29.25■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Mmp10O55123 476 aa29.24■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Abl1P00520 1123 aa29.24■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 LtbrP50284 415 aa29.24■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Sema3eP70275 775 aa29.24■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Scnn1aQ61180 699 aa29.24■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Fam196bQ6GQV1 535 aa29.24■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Cdk8Q8R3L8 464 aa29.24■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Ppp6r3Q922D4 844 aa29.24■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Lamb1P02469 1786 aa29.24■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Gprin1Q3UNH4 932 aa29.23■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Ppp1r11Q8K1L5 131 aa29.23■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Ero1bQ8R2E9 467 aa29.23■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Apbb1ipQ8R5A3 670 aa29.23■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Lrrfip2Q91WK0 415 aa29.23■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Nucb1Q02819 459 aaKnown RBP29.23■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Lca5lQ8C0X0 741 aa29.23■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 CsadQ9DBE0 493 aa29.23■■■□□ 2.27
Cpsf4-201ENSMUST00000070487 Acot3Q9QYR7 432 aa29.23■■■□□ 2.27
Retrieved 100 of 22,080 RNA–protein pairs in 1812 ms