RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Tdo2P48776 406 aa16.86■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Smarcc1P97496 1104 aa16.86■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 LbrQ3U9G9 626 aaKnown RBP16.86■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Prdm1Q60636 856 aa16.86■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Ift88Q61371 824 aa16.86■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Bola3Q8CEI1 110 aa16.86■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Pcdhb22Q91XZ8 794 aa16.86■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Ppil4Q9CXG3 492 aaKnown RBP16.86■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Tjp1P39447 1745 aaKnown RBP16.85■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Simc1E9Q6E9 1354 aa16.85■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Zbtb21E9Q444 1094 aa16.85■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Gm10134F6ZQC6 126 aa16.85■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Kifc2O08672 792 aa16.85■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Grin1P35438 938 aa16.85■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 ErmnQ5EBJ4 281 aa16.85■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 ThemisQ8BGW0 636 aa16.85■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 SelenooQ9DBC0 667 aa16.85■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Nwd2Q6P5U7 1742 aa16.85■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Cyp3a57D3YYZ0 503 aa16.85■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Prl3d2F6R3P9 224 aa16.85■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Gm21671G3UY31 267 aa16.85■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Sox5P35710 763 aa16.85■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 ItgadQ3V0T4 1168 aa16.85■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Appbp2Q9DAX9 585 aa16.85■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Col15a1O35206 1367 aa16.84■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 A0A1W2P6Q8 802 aa16.84■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Gm9048A0A1W2P7H4 802 aa16.84■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 A0A1W2P7S8 802 aa16.84■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 A0A1W2P7Z8 802 aa16.84■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Gm9046A0A1W2P855 802 aa16.84■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Ampd3O08739 766 aa16.84■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Hap1O35668 628 aa16.84■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 HrQ61645 1182 aa16.84■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Cdc5lQ6A068 802 aaKnown RBP16.84■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Exoc8Q6PGF7 716 aa16.84■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Gigyf1Q99MR1 1044 aaKnown RBP16.84■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Syf2Q9D198 242 aaKnown RBP16.84■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 IncenpQ9WU62 880 aa16.84■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Syde2E9PUP1 1314 aa16.84■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Tpm3-rs7D3Z2H9 248 aa16.84■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Acad12D3Z7X0 555 aa16.84■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Lipo1J3QME6 396 aa16.84■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Mrps31Q61733 384 aaKnown RBP16.84■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Anks1bQ8BIZ1 1259 aa16.84■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Uap1Q91YN5 522 aa16.84■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 Adamtsl3G3UXC7 1706 aa16.83■□□□□ 0.29
Ushbp1-201ENSMUST00000049184 1700017N19RikA0A087WPJ1 469 aa16.83■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Ccdc93Q7TQK5 629 aa16.83■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Pip4k2bQ80XI4 416 aa16.83■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Cfap69Q8BH53 942 aa16.83■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 NapgQ9CWZ7 312 aa16.83■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Ccdc47Q9D024 483 aaKnown RBP16.83■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Sil1Q9EPK6 465 aa16.83■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 CtcfQ61164 736 aaKnown RBP16.82■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Ift122Q6NWV3 1182 aa16.82■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Ranbp6Q8BIV3 1105 aa16.82■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Pde5aQ8CG03 865 aa16.82■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Smc4Q8CG47 1286 aa16.82■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Tcp11l2Q8K1H7 517 aa16.82■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Mical1Q8VDP3 1048 aa16.82■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Ccdc39Q9D5Y1 937 aa16.82■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Stard3nlQ9DCI3 235 aa16.82■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Pex1Q5BL07 1284 aa16.82■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Tsr1Q5SWD9 803 aa16.82■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Acbd5Q5XG73 508 aa16.82■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Olfr119Q7TRJ5 321 aa16.82■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Larp6Q8BN59 492 aa16.82■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Fam177a1Q8BR63 207 aa16.82■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Arhgef6Q8K4I3 771 aa16.82■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 CerkQ8K4Q7 531 aa16.82■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Mfap3lQ9D3X9 409 aa16.82■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Tube1Q9D6T1 475 aa16.82■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Zbtb43Q9DAI4 467 aa16.82■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Cyp3a59D3Z2W7 503 aa16.81■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Kifap3P70188 793 aa16.81■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Tubb5P99024 444 aaKnown RBP16.81■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Map10Q8BJS7 891 aa16.81■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Pbx1P41778 430 aa16.81■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 TkfcQ8VC30 578 aa16.81■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Pcdha7Q91Y13 937 aa16.81■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Ciao1Q99KN2 339 aa16.81■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Ribc1Q9D0B8 379 aa16.81■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Cwc25Q9DBF7 416 aa16.81■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Chaf1aQ9QWF0 911 aa16.81■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Naaladl2A0A0N4SUJ3 795 aa16.8■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Trim55G3X8Y1 545 aa16.8■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Pde6aP27664 859 aa16.8■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Cyp7b1Q60991 507 aa16.8■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Plppr3Q7TPB0 716 aa16.8■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Abca3Q8R420 1704 aa16.8■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Coro7Q9D2V7 922 aa16.8■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 MycbpQ9EQS3 103 aa16.8■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Lama4P97927 1816 aa16.8■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Gli3Q61602 1583 aa16.8■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Slitrk3Q810B9 980 aa16.8■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Tab2Q99K90 693 aa16.8■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Rexo5D3YW29 759 aa16.79■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Foxp1P58462 705 aa16.79■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Krt86P97861 486 aa16.79■□□□□ 0.28
Ushbp1-201ENSMUST00000049184 Rnf40Q3U319 1001 aa16.79■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms