RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 GabrdP22933 449 aa13.45□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Traf1P39428 409 aa13.45□□□□□ -0.26
Pcif1-201ENSMUST00000041643 PicalmQ7M6Y3 660 aaKnown RBP13.45□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Tmx3Q8BXZ1 456 aa13.45□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Gpcpd1Q8C0L9 675 aa13.45□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Atad2Q8CDM1 1040 aa13.45□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Usp33Q8R5K2 909 aa13.45□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Ccar2Q8VDP4 922 aaKnown RBP13.45□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Akt1s1Q9D1F4 257 aa13.45□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Ccdc105Q9D4K7 499 aa13.45□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Dynll1P63168 89 aa13.45□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Ccdc174Q3U155 467 aa13.45□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Jade2Q6ZQF7 829 aa13.45□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Ccnt1Q9QWV9 724 aaKnown RBP13.45□□□□□ -0.26
Pcif1-201ENSMUST00000041643 AmfrQ9R049 643 aa13.45□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Hook2Q7TMK6 716 aa13.45□□□□□ -0.26
Pcif1-201ENSMUST00000041643 PcQ05920 1178 aa13.44□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Cfap157Q0VFX2 523 aa13.44□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Riox2Q8CD15 465 aa13.44□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Ints5Q8CHT3 1018 aa13.44□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Kiaa0319lQ8K135 1048 aa13.44□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Mettl5Q8K1A0 209 aa13.44□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Arpp21Q9DCB4 807 aa13.44□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Flt4P35917 1363 aa13.44□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Fam228bQ497Q6 232 aa13.44□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Kif5bQ61768 963 aa13.44□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Afg3l2Q8JZQ2 802 aaKnown RBP13.44□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Calml4Q91WQ9 153 aa13.44□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Tacc2Q9JJG0 1149 aa13.44□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Nwd1A6H603 1563 aa13.44□□□□□ -0.26
Pcif1-201ENSMUST00000041643 IghaA0A0A6YXW6 389 aa13.44□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Fbf1A2A870 1173 aa13.44□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Rnf216P58283 853 aa13.44□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Cep63Q3UPP8 700 aa13.44□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Exoc3Q6KAR6 755 aa13.44□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Fbxo2Q80UW2 297 aa13.44□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Fbxo3Q9DC63 480 aa13.44□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Osbpl5Q9ER64 874 aa13.44□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Pus7B7ZNL8 666 aaKnown RBP13.44□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Pcdhb9E9Q5G2 828 aa13.44□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Eddm13E9Q7F5 164 aa13.44□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Lrrc36Q3V0M2 755 aa13.44□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Pdcd11Q6NS46 1862 aaKnown RBP13.44□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Syce1Q9D495 329 aa13.43□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Cxcl11Q9JHH5 100 aa13.43□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Prpf38aQ4FK66 312 aaKnown RBP13.43□□□□□ -0.26
Pcif1-201ENSMUST00000041643 McamQ8R2Y2 648 aaKnown RBP13.43□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Ifih1Q8R5F7 1025 aa13.43□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Adcy9P51830 1353 aa13.43□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Fam178bQ24JP3 464 aa13.43□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Stxbp3Q60770 592 aa13.43□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Kcnh3Q9WVJ0 1095 aa13.43□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Slit3Q9WVB4 1523 aa13.43□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Ano3A2AHL1 981 aa13.43□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Fam186bD3Z420 943 aa13.43□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Lipo1J3QME6 396 aa13.43□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Strip1Q8C079 837 aa13.43□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Frat2Q8K025 231 aa13.43□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Slc18a1Q8R090 521 aa13.43□□□□□ -0.26
Pcif1-201ENSMUST00000041643 AcrbpQ3V140 540 aa13.43□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Cyp2c67Q569X9 491 aa13.43□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Fam13bQ8K2H3 851 aa13.43□□□□□ -0.26
Pcif1-201ENSMUST00000041643 HibadhQ99L13 335 aaKnown RBP13.43□□□□□ -0.26
Pcif1-201ENSMUST00000041643 MicalclQ9D5U9 680 aa13.43□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Usp32F8VPZ3 1604 aa13.43□□□□□ -0.26
Pcif1-201ENSMUST00000041643 1700018F24RikB2RW27 314 aa13.42□□□□□ -0.26
Pcif1-201ENSMUST00000041643 AK157302I3ITR1 129 aa13.42□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Pde4aO89084 844 aa13.42□□□□□ -0.26
Pcif1-201ENSMUST00000041643 CebpzP53569 1052 aaKnown RBP13.42□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Sestd1Q80UK0 696 aa13.42□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Gimap7Q8R379 293 aa13.42□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Isca1Q9D924 129 aa13.42□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Sept1P42209 366 aa13.42□□□□□ -0.26
Pcif1-201ENSMUST00000041643 QarsQ8BML9 775 aa13.42□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Zmynd15Q8C0R7 736 aa13.42□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Ccdc113Q8C5T8 377 aa13.42□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Atp10bB1AWN4 1474 aa13.42□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Ccdc189Q6NZQ0 333 aa13.42□□□□□ -0.26
Pcif1-201ENSMUST00000041643 OscarQ8VBT3 265 aa13.42□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Lman1Q9D0F3 517 aa13.42□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Col4a3bpQ9EQG9 624 aa13.42□□□□□ -0.26
Pcif1-201ENSMUST00000041643 NpcdF8VQB8 469 aa13.42□□□□□ -0.26
Pcif1-201ENSMUST00000041643 NpeppsQ11011 920 aa13.42□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Vps36Q91XD6 386 aa13.42□□□□□ -0.26
Pcif1-201ENSMUST00000041643 1700013D24RikQ0P521 120 aa13.41□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Wdr70Q3TWF6 657 aa13.41□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Gtpbp6Q3U6U5 514 aa13.41□□□□□ -0.26
Pcif1-201ENSMUST00000041643 HelbQ6NVF4 1074 aa13.41□□□□□ -0.26
Pcif1-201ENSMUST00000041643 B4galnt4Q766D5 1034 aa13.41□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Atp2b1G5E829 1220 aa13.41□□□□□ -0.26
Pcif1-201ENSMUST00000041643 DnttP09838 530 aa13.41□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Rbm15bQ6PHZ5 887 aaKnown RBP13.41□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Me3Q8BMF3 604 aa13.41□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Usp37Q8C0R0 979 aa13.41□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Ifit1Q64282 463 aa13.41□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Epb41l2O70318 988 aaKnown RBP13.41□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Parp2O88554 559 aa13.41□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Ankrd13aQ80UP5 588 aa13.41□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Snw1Q9CSN1 536 aaKnown RBP13.41□□□□□ -0.26
Pcif1-201ENSMUST00000041643 Polr2dQ9D7M8 142 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms