RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Calcoco2A2A6M5 331 aa15.37■□□□□ 0.05
Nup88-201ENSMUST00000035283 Nek1P51954 1203 aa15.37■□□□□ 0.05
Nup88-201ENSMUST00000035283 Map9Q3TRR0 646 aa15.37■□□□□ 0.05
Nup88-201ENSMUST00000035283 Nol10Q5RJG1 687 aaKnown RBP15.37■□□□□ 0.05
Nup88-201ENSMUST00000035283 Tmco3Q8BH01 678 aa15.37■□□□□ 0.05
Nup88-201ENSMUST00000035283 Vps16Q920Q4 839 aa15.37■□□□□ 0.05
Nup88-201ENSMUST00000035283 Mrvi1Q9WUX5 899 aaKnown RBP15.37■□□□□ 0.05
Nup88-201ENSMUST00000035283 Mrc1Q61830 1456 aa15.37■□□□□ 0.05
Nup88-201ENSMUST00000035283 Ccdc191J3QQ27 883 aa15.37■□□□□ 0.05
Nup88-201ENSMUST00000035283 Cplx2P84086 134 aa15.37■□□□□ 0.05
Nup88-201ENSMUST00000035283 Lrriq3Q14DL3 633 aa15.37■□□□□ 0.05
Nup88-201ENSMUST00000035283 Nlrp9aQ66X03 949 aa15.37■□□□□ 0.05
Nup88-201ENSMUST00000035283 Epc1Q8C9X6 813 aa15.37■□□□□ 0.05
Nup88-201ENSMUST00000035283 Rai14Q9EP71 979 aaKnown RBP15.37■□□□□ 0.05
Nup88-201ENSMUST00000035283 Suclg2Q9Z2I8 433 aa15.37■□□□□ 0.05
Nup88-201ENSMUST00000035283 Znf326O88291 580 aa15.36■□□□□ 0.05
Nup88-201ENSMUST00000035283 Cyp7b1Q60991 507 aa15.36■□□□□ 0.05
Nup88-201ENSMUST00000035283 Fam160b2Q80YR2 744 aa15.36■□□□□ 0.05
Nup88-201ENSMUST00000035283 Sptlc3Q8BG54 563 aa15.36■□□□□ 0.05
Nup88-201ENSMUST00000035283 Dact1Q8R4A3 778 aa15.36■□□□□ 0.05
Nup88-201ENSMUST00000035283 Trim11Q99PQ2 467 aa15.36■□□□□ 0.05
Nup88-201ENSMUST00000035283 Gm21680A0A0G2JGR8 267 aa15.36■□□□□ 0.05
Nup88-201ENSMUST00000035283 A0A1L1SQF0 893 aa15.36■□□□□ 0.05
Nup88-201ENSMUST00000035283 Sdc2P43407 202 aa15.36■□□□□ 0.05
Nup88-201ENSMUST00000035283 Clec16aQ80U30 1036 aa15.36■□□□□ 0.05
Nup88-201ENSMUST00000035283 Clca2Q8BG22 942 aa15.36■□□□□ 0.05
Nup88-201ENSMUST00000035283 Prc1Q99K43 603 aaKnown RBP15.36■□□□□ 0.05
Nup88-201ENSMUST00000035283 MicalclQ9D5U9 680 aa15.36■□□□□ 0.05
Nup88-201ENSMUST00000035283 Vstm4T1NXB5 319 aa15.36■□□□□ 0.05
Nup88-201ENSMUST00000035283 Gm11983V9GXS8 105 aa15.36■□□□□ 0.05
Nup88-201ENSMUST00000035283 Cyp19a1P28649 503 aa15.35■□□□□ 0.05
Nup88-201ENSMUST00000035283 Ces1dQ8VCT4 565 aa15.35■□□□□ 0.05
Nup88-201ENSMUST00000035283 Tab2Q99K90 693 aa15.35■□□□□ 0.05
Nup88-201ENSMUST00000035283 Lama4P97927 1816 aa15.35■□□□□ 0.05
Nup88-201ENSMUST00000035283 ErmnQ5EBJ4 281 aa15.35■□□□□ 0.05
Nup88-201ENSMUST00000035283 Kcna6Q61923 529 aa15.35■□□□□ 0.05
Nup88-201ENSMUST00000035283 Enox1Q8BHR2 643 aaKnown RBP15.35■□□□□ 0.05
Nup88-201ENSMUST00000035283 Rassf4Q8CB96 322 aa15.35■□□□□ 0.05
Nup88-201ENSMUST00000035283 Hic2Q9JLZ6 619 aaKnown RBP15.35■□□□□ 0.05
Nup88-201ENSMUST00000035283 Thsd7aQ69ZU6 1645 aa15.34■□□□□ 0.05
Nup88-201ENSMUST00000035283 Tbc1d2B1AVH7 922 aa15.34■□□□□ 0.05
Nup88-201ENSMUST00000035283 Adssl1P28650 457 aa15.34■□□□□ 0.05
Nup88-201ENSMUST00000035283 Rfc1P35601 1131 aa15.34■□□□□ 0.05
Nup88-201ENSMUST00000035283 Ctnna3Q65CL1 895 aa15.34■□□□□ 0.05
Nup88-201ENSMUST00000035283 AbraQ8BUZ1 375 aa15.34■□□□□ 0.05
Nup88-201ENSMUST00000035283 Efcab8Q8C9R9 203 aa15.34■□□□□ 0.05
Nup88-201ENSMUST00000035283 Taf6lQ8R2K4 616 aa15.34■□□□□ 0.05
Nup88-201ENSMUST00000035283 PdclQ9DBX2 301 aa15.34■□□□□ 0.05
Nup88-201ENSMUST00000035283 Crb1Q8VHS2 1405 aa15.34■□□□□ 0.05
Nup88-201ENSMUST00000035283 Il7P10168 154 aa15.34■□□□□ 0.05
Nup88-201ENSMUST00000035283 Mdh1P14152 334 aa15.34■□□□□ 0.05
Nup88-201ENSMUST00000035283 Myo1bP46735 1107 aa15.34■□□□□ 0.05
Nup88-201ENSMUST00000035283 Foxp1P58462 705 aa15.34■□□□□ 0.05
Nup88-201ENSMUST00000035283 Pla2g4fQ50L41 855 aa15.34■□□□□ 0.05
Nup88-201ENSMUST00000035283 Nab2Q61127 525 aa15.34■□□□□ 0.05
Nup88-201ENSMUST00000035283 FntaQ61239 377 aa15.34■□□□□ 0.05
Nup88-201ENSMUST00000035283 TxlnaQ6PAM1 554 aaKnown RBP15.34■□□□□ 0.05
Nup88-201ENSMUST00000035283 Olfr119Q7TRJ5 321 aa15.34■□□□□ 0.05
Nup88-201ENSMUST00000035283 Zswim4Q8C7B8 1101 aa15.34■□□□□ 0.05
Nup88-201ENSMUST00000035283 Gdap1l1Q8VE33 370 aa15.34■□□□□ 0.05
Nup88-201ENSMUST00000035283 Zcchc17Q9ESX4 241 aaKnown RBP15.34■□□□□ 0.05
Nup88-201ENSMUST00000035283 DonsonQ9QXP4 560 aa15.34■□□□□ 0.05
Nup88-201ENSMUST00000035283 Med23Q80YQ2 1367 aa15.33■□□□□ 0.05
Nup88-201ENSMUST00000035283 Hap1O35668 628 aa15.33■□□□□ 0.04
Nup88-201ENSMUST00000035283 SsbP32067 415 aaKnown RBP15.33■□□□□ 0.04
Nup88-201ENSMUST00000035283 Gtf2f1Q3THK3 508 aaKnown RBP15.33■□□□□ 0.04
Nup88-201ENSMUST00000035283 Csrnp2Q8BGQ2 534 aa15.33■□□□□ 0.04
Nup88-201ENSMUST00000035283 Ccdc47Q9D024 483 aaKnown RBP15.33■□□□□ 0.04
Nup88-201ENSMUST00000035283 Ccdc39Q9D5Y1 937 aa15.33■□□□□ 0.04
Nup88-201ENSMUST00000035283 IcoslgQ9JHJ8 322 aa15.33■□□□□ 0.04
Nup88-201ENSMUST00000035283 Acad12D3Z7X0 555 aa15.33■□□□□ 0.04
Nup88-201ENSMUST00000035283 Kif3cO35066 796 aa15.33■□□□□ 0.04
Nup88-201ENSMUST00000035283 Pola2P33611 600 aa15.33■□□□□ 0.04
Nup88-201ENSMUST00000035283 Plekhf1Q3TB82 279 aa15.33■□□□□ 0.04
Nup88-201ENSMUST00000035283 Mrps31Q61733 384 aaKnown RBP15.33■□□□□ 0.04
Nup88-201ENSMUST00000035283 Nat10Q8K224 1024 aaKnown RBP15.33■□□□□ 0.04
Nup88-201ENSMUST00000035283 Krt84Q99M73 603 aa15.33■□□□□ 0.04
Nup88-201ENSMUST00000035283 Golga5Q9QYE6 729 aa15.33■□□□□ 0.04
Nup88-201ENSMUST00000035283 Casp12O08736 419 aa15.32■□□□□ 0.04
Nup88-201ENSMUST00000035283 PnnO35691 725 aaKnown RBP15.32■□□□□ 0.04
Nup88-201ENSMUST00000035283 Epb41l2O70318 988 aaKnown RBP15.32■□□□□ 0.04
Nup88-201ENSMUST00000035283 Lrrc6O88978 473 aa15.32■□□□□ 0.04
Nup88-201ENSMUST00000035283 Atp8a2P98200 1148 aa15.32■□□□□ 0.04
Nup88-201ENSMUST00000035283 C87499Q3UX49 493 aa15.32■□□□□ 0.04
Nup88-201ENSMUST00000035283 Zc3h6Q8BYK8 1177 aa15.32■□□□□ 0.04
Nup88-201ENSMUST00000035283 Bicdl2Q8CHW5 507 aa15.32■□□□□ 0.04
Nup88-201ENSMUST00000035283 Wdr64Q9D565 1086 aa15.32■□□□□ 0.04
Nup88-201ENSMUST00000035283 Tfcp2Q9ERA0 502 aa15.32■□□□□ 0.04
Nup88-201ENSMUST00000035283 Ube3bQ9ES34 1070 aa15.32■□□□□ 0.04
Nup88-201ENSMUST00000035283 Kcnq5Q9JK45 933 aa15.32■□□□□ 0.04
Nup88-201ENSMUST00000035283 Mast3Q3U214 1321 aa15.32■□□□□ 0.04
Nup88-201ENSMUST00000035283 Exoc3l2D3YUP5 789 aa15.32■□□□□ 0.04
Nup88-201ENSMUST00000035283 Ampd3O08739 766 aa15.32■□□□□ 0.04
Nup88-201ENSMUST00000035283 Sox5P35710 763 aa15.32■□□□□ 0.04
Nup88-201ENSMUST00000035283 Traf1P39428 409 aa15.32■□□□□ 0.04
Nup88-201ENSMUST00000035283 Ccdc57Q6PHN1 1016 aa15.32■□□□□ 0.04
Nup88-201ENSMUST00000035283 Abca15E9PWH4 1668 aa15.31■□□□□ 0.04
Nup88-201ENSMUST00000035283 Rgs22G3UYX5 1258 aa15.31■□□□□ 0.04
Nup88-201ENSMUST00000035283 Pde11aP0C1Q2 933 aa15.31■□□□□ 0.04
Nup88-201ENSMUST00000035283 Ccdc174Q3U155 467 aa15.31■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms