RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Pcdhb5Q91XZ5 792 aa11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Mast3Q3U214 1321 aa11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Rsph10bE9PYQ0 876 aa11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 E9QMW4 1145 aa11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Tlr7P58681 1050 aa11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 PsdQ5DTT2 1024 aa11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Fchsd1Q6PFY1 688 aa11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Nop53Q8BK35 484 aaKnown RBP11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Appbp2Q9DAX9 585 aa11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Usp32F8VPZ3 1604 aa11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 GalcP54818 684 aa11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Sun3Q5SS91 320 aa11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 TrhQ62361 256 aa11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Ccdc186Q8C9S4 917 aa11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Edc3Q8K2D3 508 aaKnown RBP11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 ParnQ8VDG3 624 aa11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Atp12aQ9Z1W8 1035 aa11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 InsrrQ9WTL4 1300 aa11.19□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Olfr247E9PVJ7 320 aa11.19□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Olfr819K7N727 320 aa11.19□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Nf2P46662 596 aa11.19□□□□□ -0.62
Ldlr-201ENSMUST00000034713 NfkbibQ60778 359 aa11.19□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Smarcc2Q6PDG5 1213 aa11.19□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Efhd1Q9D4J1 240 aa11.19□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Tacc2Q9JJG0 1149 aa11.19□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Gm28510A0A087WP28 240 aa11.19□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Ube4aE9Q735 1028 aa11.19□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Tgfb1i1Q62219 461 aa11.19□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Prune1Q8BIW1 454 aa11.19□□□□□ -0.62
Ldlr-201ENSMUST00000034713 AbraQ8BUZ1 375 aa11.19□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Triml1Q8BVP1 470 aa11.19□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Stx8O88983 236 aa11.19□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Prl3d1P18121 224 aa11.19□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Ets1P27577 440 aa11.19□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Kank4Q6P9J5 1016 aa11.19□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Ebag9Q9D0V7 213 aa11.19□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Zfp597E9Q6S0 419 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Mcm5P49718 733 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Igbp1Q61249 340 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Ctdp1Q7TSG2 960 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Wdr24Q8CFJ9 790 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Vps37cQ8R105 352 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Haus2Q9CQS9 234 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 4930548H24RikQ9D496 437 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Znf704Q9ERQ3 566 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Kcnh3Q9WVJ0 1095 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Fam170aQ66LM6 333 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Ppp2r5bQ6PD28 497 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Abtb2Q7TQI7 1024 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Larp6Q8BN59 492 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Tsr2Q8C8T8 191 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Ciao1Q99KN2 339 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Ccdc7Q9D541 371 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Dmrtc1Q9D9R7 182 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Cnpy2Q9QXT0 182 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Gm1993A6X8I0 212 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 SlxD3Z347 212 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 EmbP21995 330 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 MarcksP26645 309 aaKnown RBP11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Il15P48346 162 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Csrnp1P59054 583 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Zfp202Q8C879 641 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Pym1Q8CHP5 203 aaKnown RBP11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Gys2Q8VCB3 704 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Znf521Q6KAS7 1311 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Klhl34A2AI76 644 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Micall1Q8BGT6 870 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Etf1Q8BWY3 437 aaKnown RBP11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Pde5aQ8CG03 865 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Pdlim2Q8R1G6 349 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Ubxn1Q922Y1 297 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 StambpQ9CQ26 424 aa11.18□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Rasal2E9PW37 1286 aa11.17□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Nfxl1E9Q8I7 918 aaKnown RBP11.17□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Plcb3P51432 1234 aaKnown RBP11.17□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Myl6bQ8CI43 207 aa11.17□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Afg3l2Q8JZQ2 802 aaKnown RBP11.17□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Calml3Q9D6P8 149 aa11.17□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Xpo4Q9ESJ0 1151 aa11.17□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Fmnl3Q6ZPF4 1028 aa11.17□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Cyp2d12Q8BVD2 504 aa11.17□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Tpcn2Q8BWC0 731 aa11.17□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Dis3l2Q8CI75 870 aaKnown RBP11.17□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Adcy3Q8VHH7 1145 aa11.17□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Sparcl1P70663 650 aa11.17□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Erich4Q3UNU4 136 aa11.17□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Amhr2Q8K592 568 aa11.17□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Tbc1d4Q8BYJ6 1307 aa11.17□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Gm29094F6Q785 221 aa11.16□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Mtx1P47802 317 aa11.16□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Usp5P56399 858 aaKnown RBP11.16□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Ccdc57Q6PHN1 1016 aa11.16□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Kiaa0319lQ8K135 1048 aa11.16□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Vps36Q91XD6 386 aa11.16□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Tshz1Q5DTH5 1084 aa11.16□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Snd1Q78PY7 910 aaKnown RBP11.16□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Lrrc8aQ80WG5 810 aa11.16□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Ranbp6Q8BIV3 1105 aa11.16□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Themis2Q91YX0 663 aa11.16□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Atp10bB1AWN4 1474 aa11.16□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms