RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Lamc1P02468 1607 aaKnown RBP18.69■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Sept7O55131 436 aa18.69■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Tbc1d2bQ3U0J8 965 aa18.69■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Igf2bp2Q5SF07 592 aaKnown RBP18.69■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Ift122Q6NWV3 1182 aa18.69■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Ttc12Q8BW49 704 aa18.69■□□□□ 0.58
Col17a1-201ENSMUST00000026045 P3h4Q8K2B0 443 aa18.69■□□□□ 0.58
Col17a1-201ENSMUST00000026045 4921530L21RikQ9CQ47 274 aa18.69■□□□□ 0.58
Col17a1-201ENSMUST00000026045 KynuQ9CXF0 464 aa18.69■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Ubn2Q80WC1 1314 aa18.69■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Myom2Q14BI5 1463 aa18.69■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Znf608Q56A10 1511 aa18.68■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Pus7B7ZNL8 666 aaKnown RBP18.68■□□□□ 0.58
Col17a1-201ENSMUST00000026045 EspnlQ3UYR4 1005 aa18.68■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Igbp1Q61249 340 aa18.68■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Haus1Q8BHX1 278 aa18.68■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Rbm17Q8JZX4 405 aaKnown RBP18.68■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Ccdc110Q3V125 848 aa18.68■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Cep128Q8BI22 1102 aa18.68■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Rps6kb1Q8BSK8 525 aa18.68■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Abt1Q9QYL7 269 aaKnown RBP18.68■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Clec16aQ80U30 1036 aa18.68■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Card14Q99KF0 999 aa18.68■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Tpcn1Q9EQJ0 817 aa18.68■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Nap1l5Q9JJF0 156 aa18.68■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Ttc41Q692V3 1318 aa18.68■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Nedd9O35177 833 aa18.67■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Sun3Q5SS91 320 aa18.67■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Eif3cQ8R1B4 911 aaKnown RBP18.67■□□□□ 0.58
Col17a1-201ENSMUST00000026045 BrapQ99MP8 591 aa18.67■□□□□ 0.58
Col17a1-201ENSMUST00000026045 4930449I24RikQ9D5E3 319 aa18.67■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Cnbd1B1AWM0 430 aa18.67■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Ccdc105Q9D4K7 499 aa18.67■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Tagap1P0CAX8 505 aa18.67■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Fgfr1opQ66JX5 399 aa18.67■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Cep104Q80V31 926 aa18.67■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Ppp2r2cQ8BG02 447 aa18.67■□□□□ 0.58
Col17a1-201ENSMUST00000026045 MthfsQ9D110 203 aa18.67■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Wdhd1P59328 1117 aa18.67■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Pwp2Q8BU03 919 aaKnown RBP18.67■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Rint1Q8BZ36 792 aa18.67■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Terf2ipQ91VL8 393 aa18.67■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Slc12a2P55012 1205 aa18.66■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Stim2P83093 746 aa18.66■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Cnnm2Q3TWN3 875 aa18.66■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Krit1Q6S5J6 736 aa18.66■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Dennd3A2RT67 1274 aa18.66■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Ets1P27577 440 aa18.66■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Lrriq1Q0P5X1 1673 aa18.66■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Acot9Q9R0X4 439 aaKnown RBP18.66■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Uggt2E9Q4X2 1504 aa18.66■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Gimap8Q75N62 688 aa18.66■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Ankrd2Q9WV06 328 aa18.66■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Ror2Q9Z138 944 aa18.66■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Slc1a4O35874 532 aa18.66■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Kank4Q6P9J5 1016 aa18.66■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Cdan1Q8CC12 1239 aa18.66■□□□□ 0.58
Col17a1-201ENSMUST00000026045 HscbQ8K3A0 234 aa18.66■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Pla2g4fQ50L41 855 aa18.65■□□□□ 0.58
Col17a1-201ENSMUST00000026045 SkiQ60698 725 aa18.65■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Pram1Q6BCL1 675 aa18.65■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Stkld1Q80YS9 662 aa18.65■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Maip1Q8BHE8 291 aa18.65■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Rtel1Q0VGM9 1203 aa18.65■□□□□ 0.58
Col17a1-201ENSMUST00000026045 NntQ61941 1086 aaKnown RBP18.65■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Krt71Q9R0H5 524 aa18.65■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Fam207aP58468 219 aaKnown RBP18.65■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Chl1P70232 1209 aa18.65■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Hook2Q7TMK6 716 aa18.65■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Cfap65Q3V0B4 1847 aa18.65■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Kdm5aQ3UXZ9 1690 aa18.65■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Mbd5B1AYB6 1498 aa18.65■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Cracr2aQ3UP38 310 aa18.65■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Ssrp1Q08943 708 aaKnown RBP18.64■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Ctnna2Q61301 953 aa18.64■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Ccdc122Q8BVN0 290 aa18.64■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Dtnbp1Q91WZ8 352 aa18.64■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Nuf2Q99P69 463 aa18.64■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Prl3d3A0A0M6L0J6 224 aa18.64■□□□□ 0.57
Col17a1-201ENSMUST00000026045 RilpQ5ND29 369 aa18.64■□□□□ 0.57
Col17a1-201ENSMUST00000026045 Vps52Q8C754 723 aaKnown RBP18.64■□□□□ 0.57
Col17a1-201ENSMUST00000026045 Exoc1Q8R3S6 894 aa18.64■□□□□ 0.57
Col17a1-201ENSMUST00000026045 Fam133bQ9CVI2 245 aaKnown RBP18.64■□□□□ 0.57
Col17a1-201ENSMUST00000026045 Dmrtc1Q9D9R7 182 aa18.64■□□□□ 0.57
Col17a1-201ENSMUST00000026045 JmyQ9QXM1 983 aa18.64■□□□□ 0.57
Col17a1-201ENSMUST00000026045 Eif4a1P60843 406 aaKnown RBP18.64■□□□□ 0.57
Col17a1-201ENSMUST00000026045 Oxsr1Q6P9R2 527 aa18.64■□□□□ 0.57
Col17a1-201ENSMUST00000026045 Tbc1d5Q80XQ2 815 aa18.64■□□□□ 0.57
Col17a1-201ENSMUST00000026045 Acnat2Q8BGG9 420 aa18.64■□□□□ 0.57
Col17a1-201ENSMUST00000026045 Dclk3Q8BWQ5 790 aa18.64■□□□□ 0.57
Col17a1-201ENSMUST00000026045 Slc5a4bQ91ZP4 660 aa18.64■□□□□ 0.57
Col17a1-201ENSMUST00000026045 Sar1bQ9CQC9 198 aa18.64■□□□□ 0.57
Col17a1-201ENSMUST00000026045 TnksQ6PFX9 1320 aa18.64■□□□□ 0.57
Col17a1-201ENSMUST00000026045 Sult6b1P0CC03 303 aa18.64■□□□□ 0.57
Col17a1-201ENSMUST00000026045 Gle1Q8R322 699 aa18.64■□□□□ 0.57
Col17a1-201ENSMUST00000026045 Tekt2Q922G7 430 aa18.64■□□□□ 0.57
Col17a1-201ENSMUST00000026045 MycnP03966 462 aaKnown RBP18.63■□□□□ 0.57
Col17a1-201ENSMUST00000026045 Taok1Q5F2E8 1001 aa18.63■□□□□ 0.57
Col17a1-201ENSMUST00000026045 Mx2Q9WVP9 655 aa18.63■□□□□ 0.57
Col17a1-201ENSMUST00000026045 Tulp4Q9JIL5 1547 aa18.63■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms