RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Setbp1Q9Z180 1582 aa13.69□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Vmn2r68L7N2B3 851 aa13.69□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Gpr101Q80T62 511 aa13.69□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Lrit1Q8K099 624 aa13.69□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Tab2Q99K90 693 aa13.69□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Myoz2Q9JJW5 264 aa13.69□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Pde4aO89084 844 aa13.69□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Cyp19a1P28649 503 aa13.69□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Scaf8Q6DID3 1268 aa13.69□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Paxip1Q6NZQ4 1056 aa13.69□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Exoc8Q6PGF7 716 aa13.69□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Nxf7Q80SZ6 620 aaKnown RBP13.69□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Sept9Q80UG5 583 aa13.69□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Pramel6Q810Y9 485 aa13.69□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Atp7bQ64446 1462 aa13.69□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Zcchc11B2RX14 1644 aaKnown RBP13.69□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Sorbs3Q9R1Z8 733 aa13.68□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Dip2bQ3UH60 1574 aa13.68□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Cyp3a57D3YYZ0 503 aa13.68□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Mroh1E0CZ22 1640 aa13.68□□□□□ -0.22
Ctr9-201ENSMUST00000005749 MybP06876 636 aa13.68□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Ciao1Q99KN2 339 aa13.68□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Pus7B7ZNL8 666 aaKnown RBP13.68□□□□□ -0.22
Ctr9-201ENSMUST00000005749 LdhaP06151 332 aaKnown RBP13.68□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Plcb3P51432 1234 aaKnown RBP13.68□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Dync1li2Q6PDL0 492 aaKnown RBP13.68□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Rbm10Q99KG3 930 aaKnown RBP13.68□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Atp12aQ9Z1W8 1035 aa13.68□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Ano3A2AHL1 981 aa13.67□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Sept1P42209 366 aa13.67□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Tdo2P48776 406 aa13.67□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Ccdc174Q3U155 467 aa13.67□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Mns1Q61884 491 aa13.67□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Exoc1Q8R3S6 894 aa13.67□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Rims2Q9EQZ7 1530 aa13.67□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Adcy9P51830 1353 aa13.67□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Npc1l1Q6T3U4 1333 aa13.67□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Luc7lQ9CYI4 371 aaKnown RBP13.67□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Tyro3P55144 880 aa13.67□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Mex3cQ05A36 652 aaKnown RBP13.67□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Polr2dQ9D7M8 142 aaKnown RBP13.67□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Armc2Q3URY6 854 aa13.66□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Rufy1Q8BIJ7 712 aa13.66□□□□□ -0.22
Ctr9-201ENSMUST00000005749 SrrtQ99MR6 875 aaKnown RBP13.66□□□□□ -0.22
Ctr9-201ENSMUST00000005749 AmfrQ9R049 643 aa13.66□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Chrna5Q2MKA5 467 aa13.66□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Eepd1Q3TGW2 569 aa13.66□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Lrrc45Q8CIM1 670 aa13.66□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Bcl2l12Q9D3J3 255 aa13.66□□□□□ -0.22
Ctr9-201ENSMUST00000005749 CsadQ9DBE0 493 aa13.66□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Ehd4Q9EQP2 541 aa13.66□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Kcnj4P52189 445 aa13.66□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Tfcp2l1Q3UNW5 479 aa13.66□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Bola3Q8CEI1 110 aa13.66□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Ttc37F8VPK0 1563 aa13.66□□□□□ -0.22
Ctr9-201ENSMUST00000005749 A0A1Y7VML8 143 aa13.66□□□□□ -0.22
Ctr9-201ENSMUST00000005749 AK157302I3ITR1 129 aa13.66□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Snx25Q3ZT31 840 aa13.66□□□□□ -0.22
Ctr9-201ENSMUST00000005749 PrimpolQ6P1E7 537 aa13.66□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Eaf2Q91ZD6 262 aa13.66□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Isca1Q9D924 129 aa13.66□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Cnpy2Q9QXT0 182 aa13.66□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Cyp2c69E9PXC3 491 aa13.65□□□□□ -0.22
Ctr9-201ENSMUST00000005749 DnttP09838 530 aa13.65□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Cyp2c40P56657 491 aa13.65□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Vps33bP59016 617 aa13.65□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Cep112Q5PR68 954 aa13.65□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Olfr118Q7TRJ6 321 aa13.65□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Haus2Q9CQS9 234 aa13.65□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Iqgap1Q9JKF1 1657 aaKnown RBP13.65□□□□□ -0.22
Ctr9-201ENSMUST00000005749 PpardP35396 440 aa13.65□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Afg3l2Q8JZQ2 802 aaKnown RBP13.65□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Chaf1aQ9QWF0 911 aa13.65□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Klhl30Q8C3F7 581 aa13.65□□□□□ -0.22
Ctr9-201ENSMUST00000005749 Tbc1d2B1AVH7 922 aa13.64□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Zscan18E9PUD6 809 aa13.64□□□□□ -0.23
Ctr9-201ENSMUST00000005749 CebpzP53569 1052 aaKnown RBP13.64□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Slx1bQ8BX32 270 aa13.64□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Cxcl11Q9JHH5 100 aa13.64□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Tnnt2P50752 301 aa13.64□□□□□ -0.23
Ctr9-201ENSMUST00000005749 AsnsQ61024 561 aa13.64□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Ncapg2Q6DFV1 1138 aa13.64□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Phldb2Q8K1N2 1249 aa13.64□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Cfap53Q9D439 514 aa13.64□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Mipol1Q9D9F8 279 aa13.64□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Trmt112Q9DCG9 125 aa13.64□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Igfbp6P47880 238 aa13.64□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Slc38a10Q5I012 1090 aa13.64□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Jade2Q6ZQF7 829 aa13.64□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Luc7l2Q7TNC4 392 aaKnown RBP13.64□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Bbs9Q811G0 885 aa13.64□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Ciapin1Q8WTY4 309 aa13.64□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Fam228bQ497Q6 232 aa13.63□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Tmem179Q8BHH9 233 aa13.63□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Enox2Q8R0Z2 598 aa13.63□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Ftsj3Q9DBE9 838 aaKnown RBP13.63□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Cyp2c68K7N6C2 491 aa13.63□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Ccdc102aQ3TMW1 549 aa13.63□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Vars2Q3U2A8 1060 aa13.63□□□□□ -0.23
Ctr9-201ENSMUST00000005749 Kctd1Q5M956 257 aa13.63□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms