RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Slc7a1Q09143 622 aa13.73□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Zbtb38Q3LR78 1197 aa13.73□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Ric8aQ3TIR3 530 aa13.73□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Smg7Q5RJH6 1138 aaKnown RBP13.73□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Atf3Q60765 181 aa13.73□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Golga5Q9QYE6 729 aa13.73□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Med23Q80YQ2 1367 aa13.73□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Jakmip3Q5DTN8 844 aa13.72□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Cep112Q5PR68 954 aa13.72□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Adam1aQ60813 791 aa13.72□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Q66JV7 365 aa13.72□□□□□ -0.21
Rfx1-201ENSMUST00000005600 MlecQ6ZQI3 291 aaKnown RBP13.72□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Ugt1a6bK9J7B2 531 aa13.72□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Pla2g4bP0C871 782 aa13.72□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Ttll12Q3UDE2 639 aa13.72□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Ugt1a6Q64435 531 aa13.72□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Ugt1a7cQ6ZQM8 531 aa13.72□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Enox1Q8BHR2 643 aaKnown RBP13.72□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Pde5aQ8CG03 865 aa13.72□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Rtn1Q8K0T0 780 aa13.72□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Cwc15Q9JHS9 229 aaKnown RBP13.72□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Ces1hD3Z298 562 aa13.72□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Edrf1Q6GQV7 1239 aa13.72□□□□□ -0.21
Rfx1-201ENSMUST00000005600 RgmbQ7TQ33 436 aa13.72□□□□□ -0.21
Rfx1-201ENSMUST00000005600 AbraQ8BUZ1 375 aa13.72□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Efcab8Q8C9R9 203 aa13.72□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Cfap45Q9D9U9 551 aa13.72□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Rai14Q9EP71 979 aaKnown RBP13.72□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Prl2c1Q5SVL9 228 aa13.72□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Asnsd1Q8BFS9 627 aa13.72□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Alx1Q8C8B0 326 aa13.72□□□□□ -0.21
Rfx1-201ENSMUST00000005600 CerkQ8K4Q7 531 aa13.72□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Gpr182P43142 395 aa13.71□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Psmb7P70195 277 aa13.71□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Pla2g4fQ50L41 855 aa13.71□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Atp1a2Q6PIE5 1020 aa13.71□□□□□ -0.21
Rfx1-201ENSMUST00000005600 TxlnaQ6PAM1 554 aaKnown RBP13.71□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Ranbp6Q8BIV3 1105 aa13.71□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Bicdl2Q8CHW5 507 aa13.71□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Klhl40Q9D783 621 aa13.71□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Tc2nQ91XT6 489 aa13.71□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Ube3bQ9ES34 1070 aa13.71□□□□□ -0.22
Rfx1-201ENSMUST00000005600 A0A0U1RNP2 1173 aa13.7□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Zscan20B2KFW1 1030 aa13.7□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Gm21969J3QJZ1 289 aa13.7□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Tab2Q99K90 693 aa13.7□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Cep89Q9CZX2 791 aa13.7□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Tbc1d8bA3KGB4 1114 aa13.7□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Capn2O08529 700 aa13.7□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Clec16aQ80U30 1036 aa13.7□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Map3k11Q80XI6 850 aa13.7□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Clic6Q8BHB9 596 aa13.7□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Gpr108Q91WD0 569 aa13.7□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Smc1bQ920F6 1248 aa13.7□□□□□ -0.22
Rfx1-201ENSMUST00000005600 WtapQ9ER69 396 aa13.7□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Prl3d1P18121 224 aa13.7□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Nek1P51954 1203 aa13.7□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Cnnm2Q3TWN3 875 aa13.7□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Gm12185Q5NCB2 835 aa13.7□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Tbx2Q60707 711 aa13.7□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Rbm28Q8CGC6 750 aaKnown RBP13.7□□□□□ -0.22
Rfx1-201ENSMUST00000005600 PdclQ9DBX2 301 aa13.7□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Lmbr1Q9JIT0 490 aa13.7□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Cyp2d9P11714 504 aa13.69□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Adssl1P28650 457 aa13.69□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Iqcb1Q8BP00 598 aa13.69□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Hip1rQ9JKY5 1068 aa13.69□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Grin1P35438 938 aa13.69□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Ccdc57Q6PHN1 1016 aa13.69□□□□□ -0.22
Rfx1-201ENSMUST00000005600 VmacQ8BP01 174 aa13.69□□□□□ -0.22
Rfx1-201ENSMUST00000005600 BaatQ91X34 420 aa13.69□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Clstn1Q9EPL2 979 aa13.69□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Vstm4T1NXB5 319 aa13.69□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Exoc3l2D3YUP5 789 aa13.69□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Mdh1P14152 334 aa13.69□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Ccdc174Q3U155 467 aa13.69□□□□□ -0.22
Rfx1-201ENSMUST00000005600 CtcfQ61164 736 aaKnown RBP13.69□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Clca2Q8BG22 942 aa13.69□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Eaf2Q91ZD6 262 aa13.69□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Mkrn3Q60764 544 aa13.68□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Zswim4Q8C7B8 1101 aa13.68□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Wnk3Q80XP9 1757 aa13.68□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Abca3Q8R420 1704 aa13.68□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Gm10134F6ZQC6 126 aa13.68□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Tnni2P13412 182 aa13.68□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Rad23aP54726 363 aa13.68□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Cyp7b1Q60991 507 aa13.68□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Igsf3Q6ZQA6 1194 aa13.68□□□□□ -0.22
Rfx1-201ENSMUST00000005600 NenfQ9CQ45 171 aa13.68□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Pik3ap1Q9EQ32 811 aa13.68□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Suclg2Q9Z2I8 433 aa13.68□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Rsrc2A2RTL5 376 aaKnown RBP13.68□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Acad12D3Z7X0 555 aa13.68□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Trim34bJ3QNR8 485 aa13.68□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Ccdc73Q8CDM4 1066 aa13.68□□□□□ -0.22
Rfx1-201ENSMUST00000005600 HdgfP51859 237 aaKnown RBP13.68□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Nab2Q61127 525 aa13.68□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Snd1Q78PY7 910 aaKnown RBP13.68□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Anks1bQ8BIZ1 1259 aa13.68□□□□□ -0.22
Rfx1-201ENSMUST00000005600 Hic2Q9JLZ6 619 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 35.8 ms