RNA–Protein interactions for RNA: YLR308W

CDA2, Transcript of Chitin deacetylase, yeastyeast

Gene CDA2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDA2YLR308W COQ8P27697 501 aa10.47□□□□□ -0.73
CDA2YLR308W EDS1P38073 919 aa10.46□□□□□ -0.73
CDA2YLR308W JIP4Q03361 876 aa10.46□□□□□ -0.73
CDA2YLR308W GRE2Q12068 342 aaKnown RBP10.42□□□□□ -0.74
CDA2YLR308W YEL023CP39992 682 aa10.41□□□□□ -0.74
CDA2YLR308W DAN4P47179 1161 aa10.41□□□□□ -0.74
CDA2YLR308W PTC4P38089 393 aa10.39□□□□□ -0.75
CDA2YLR308W PTC3P34221 468 aaKnown RBP10.37□□□□□ -0.75
CDA2YLR308W SET1P38827 1080 aaKnown RBP10.37□□□□□ -0.75
CDA2YLR308W ATH1P48016 1211 aa10.36□□□□□ -0.75
CDA2YLR308W SAP30P38429 201 aa10.35□□□□□ -0.75
CDA2YLR308W YDL129WQ07555 291 aa10.32□□□□□ -0.76
CDA2YLR308W GUT1P32190 709 aa10.31□□□□□ -0.76
CDA2YLR308W RQC2Q12532 1038 aaKnown RBP10.3□□□□□ -0.76
CDA2YLR308W PML39Q03760 334 aa10.21□□□□□ -0.77
CDA2YLR308W NOP53Q12080 455 aaKnown RBP10.21□□□□□ -0.77
CDA2YLR308W CHL1P22516 861 aaPredicted RBP10.18□□□□□ -0.78
CDA2YLR308W PRE3P38624 215 aa10.16□□□□□ -0.78
CDA2YLR308W SOL3P38858 249 aa10.13□□□□□ -0.79
CDA2YLR308W NST1P53935 1240 aa10.13□□□□□ -0.79
CDA2YLR308W VPS70P47161 811 aa10.1□□□□□ -0.79
CDA2YLR308W YPR148CQ06523 435 aa10.09□□□□□ -0.79
CDA2YLR308W AI4P03878 556 aa10.08□□□□□ -0.8
CDA2YLR308W MPH3P0CE00 602 aa10.08□□□□□ -0.8
CDA2YLR308W IFH1P39520 1085 aa10.08□□□□□ -0.8
CDA2YLR308W MID1P41821 548 aa10.08□□□□□ -0.8
CDA2YLR308W BCK2P33306 851 aa10.07□□□□□ -0.8
CDA2YLR308W ELP4Q02884 456 aaKnown RBP10.07□□□□□ -0.8
CDA2YLR308W YGR273CP53329 174 aa10.06□□□□□ -0.8
CDA2YLR308W YDR344CQ05510 147 aa10.06□□□□□ -0.8
CDA2YLR308W SAS10Q12136 610 aaPredicted RBP10.04□□□□□ -0.8
CDA2YLR308W PEX29Q03370 554 aa10.03□□□□□ -0.8
CDA2YLR308W ILV3P39522 585 aaKnown RBP10.01□□□□□ -0.81
CDA2YLR308W VHR2P40041 505 aa10□□□□□ -0.81
CDA2YLR308W ARH1P48360 493 aa10□□□□□ -0.81
CDA2YLR308W VRP1P37370 817 aa9.95□□□□□ -0.82
CDA2YLR308W UBP14P38237 781 aaKnown RBP9.94□□□□□ -0.82
CDA2YLR308W YLR326WQ06170 240 aaKnown RBP9.94□□□□□ -0.82
CDA2YLR308W KEX1P09620 729 aa9.93□□□□□ -0.82
CDA2YLR308W REF2P42073 533 aaPredicted RBP9.92□□□□□ -0.82
CDA2YLR308W HAP5Q02516 242 aa9.9□□□□□ -0.82
CDA2YLR308W SPT23P35210 1082 aa9.89□□□□□ -0.83
CDA2YLR308W SLI15P38283 698 aa9.89□□□□□ -0.83
CDA2YLR308W MPC54Q08550 464 aa9.89□□□□□ -0.83
CDA2YLR308W CKB1P43639 278 aa9.87□□□□□ -0.83
CDA2YLR308W YDR090CQ03193 310 aa9.86□□□□□ -0.83
CDA2YLR308W PCS60P38137 543 aaKnown RBP RIP-Chip data9.85□□□□□ -0.83not detected
CDA2YLR308W XDJ1P39102 459 aa9.85□□□□□ -0.83
CDA2YLR308W RAD54P32863 898 aa9.83□□□□□ -0.84
CDA2YLR308W PBS2P08018 668 aa9.82□□□□□ -0.84
CDA2YLR308W BNI4P53858 892 aa9.82□□□□□ -0.84
CDA2YLR308W NMA111P53920 997 aa9.82□□□□□ -0.84
CDA2YLR308W DPL1Q05567 589 aa9.81□□□□□ -0.84
CDA2YLR308W PTC2P39966 464 aaKnown RBP9.79□□□□□ -0.84
CDA2YLR308W KIC1P38692 1080 aa9.78□□□□□ -0.84
CDA2YLR308W SPB4P25808 606 aaPredicted RBP9.77□□□□□ -0.85
CDA2YLR308W COX6P00427 148 aa9.76□□□□□ -0.85
CDA2YLR308W YML082WQ04533 649 aaKnown RBP9.74□□□□□ -0.85
CDA2YLR308W CDC73Q06697 393 aa9.74□□□□□ -0.85
CDA2YLR308W MAK21Q12176 1025 aaKnown RBP9.73□□□□□ -0.85
CDA2YLR308W DSF2P38213 736 aa9.71□□□□□ -0.86
CDA2YLR308W ISU2Q12056 156 aa9.71□□□□□ -0.86
CDA2YLR308W MAM3Q12296 706 aa9.68□□□□□ -0.86
CDA2YLR308W DPS1P04802 557 aaKnown RBP9.66□□□□□ -0.86
CDA2YLR308W IES2P40154 320 aa9.66□□□□□ -0.86
CDA2YLR308W RPP1BP10622 106 aaKnown RBP9.65□□□□□ -0.86
CDA2YLR308W ORC6P38826 435 aa9.63□□□□□ -0.87
CDA2YLR308W YPR015CQ12531 247 aa9.58□□□□□ -0.88
CDA2YLR308W RAM1P22007 431 aa9.57□□□□□ -0.88
CDA2YLR308W NUP42P49686 430 aaKnown RBP9.57□□□□□ -0.88
CDA2YLR308W GAP1P19145 602 aaPredicted RBP9.56□□□□□ -0.88
CDA2YLR308W DIT2P21595 489 aa9.56□□□□□ -0.88
CDA2YLR308W PDR1P12383 1068 aa9.55□□□□□ -0.88
CDA2YLR308W PEX21P50091 288 aa9.53□□□□□ -0.88
CDA2YLR308W GYP1Q08484 637 aa9.53□□□□□ -0.88
CDA2YLR308W MVP1P40959 511 aaKnown RBP9.52□□□□□ -0.89
CDA2YLR308W CSC1Q06538 782 aa9.52□□□□□ -0.89
CDA2YLR308W RGR1P19263 1082 aa9.5□□□□□ -0.89
CDA2YLR308W TUM1Q08686 304 aaKnown RBP9.5□□□□□ -0.89
CDA2YLR308W YRR1Q12172 810 aa9.5□□□□□ -0.89
CDA2YLR308W TFB4Q12004 338 aa9.48□□□□□ -0.89
CDA2YLR308W PSE1P32337 1089 aaKnown RBP9.47□□□□□ -0.89
CDA2YLR308W LEU3P08638 886 aa9.46□□□□□ -0.9
CDA2YLR308W YPR109WQ06104 294 aa9.45□□□□□ -0.9
CDA2YLR308W GLC3P32775 704 aa9.43□□□□□ -0.9
CDA2YLR308W SAS4Q04003 481 aa9.42□□□□□ -0.9
CDA2YLR308W YNR021WP53723 404 aaKnown RBP9.4□□□□□ -0.9
CDA2YLR308W RAS1P01119 309 aa9.39□□□□□ -0.91
CDA2YLR308W NUD1P32336 851 aa9.37□□□□□ -0.91
CDA2YLR308W BUD20Q08004 166 aaPredicted RBP9.36□□□□□ -0.91
CDA2YLR308W STR2P47164 639 aa9.35□□□□□ -0.91
CDA2YLR308W SRC1Q03707 834 aa9.35□□□□□ -0.91
CDA2YLR308W PRT1P06103 763 aaKnown RBP9.34□□□□□ -0.91
CDA2YLR308W AMS1P22855 1083 aa9.34□□□□□ -0.91
CDA2YLR308W NPL4P33755 580 aa9.34□□□□□ -0.91
CDA2YLR308W TEA1P47988 759 aa9.34□□□□□ -0.91
CDA2YLR308W ISM1P48526 1002 aa9.34□□□□□ -0.91
CDA2YLR308W ATF2P53296 535 aa9.34□□□□□ -0.91
CDA2YLR308W MRF1P30775 413 aaPredicted RBP9.32□□□□□ -0.92
CDA2YLR308W SDH2P21801 266 aa9.31□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms