RNA–Protein interactions for RNA: YLR007W

NSE1, Transcript of Component of the SMC5-SMC6 complex, yeastyeast

Gene NSE1, Length 1,011 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSE1YLR007W SEC61P32915 480 aa9.05□□□□□ -0.96
NSE1YLR007W DAN4P47179 1161 aa9.03□□□□□ -0.96
NSE1YLR007W COQ8P27697 501 aa9.02□□□□□ -0.97
NSE1YLR007W PTC3P34221 468 aaKnown RBP9.02□□□□□ -0.97
NSE1YLR007W GRE2Q12068 342 aaKnown RBP9.02□□□□□ -0.97
NSE1YLR007W YEL023CP39992 682 aa9□□□□□ -0.97
NSE1YLR007W JIP4Q03361 876 aa9□□□□□ -0.97
NSE1YLR007W ATH1P48016 1211 aa8.96□□□□□ -0.98
NSE1YLR007W PTC4P38089 393 aa8.95□□□□□ -0.98
NSE1YLR007W GUT1P32190 709 aa8.94□□□□□ -0.98
NSE1YLR007W TFG1P41895 735 aaPredicted RBP8.94□□□□□ -0.98
NSE1YLR007W SAS10Q12136 610 aaPredicted RBP8.93□□□□□ -0.98
NSE1YLR007W SAP30P38429 201 aa8.91□□□□□ -0.98
NSE1YLR007W YDL129WQ07555 291 aa8.89□□□□□ -0.99
NSE1YLR007W NST1P53935 1240 aa8.88□□□□□ -0.99
NSE1YLR007W SOL3P38858 249 aa8.87□□□□□ -0.99
NSE1YLR007W SET1P38827 1080 aaKnown RBP8.86□□□□□ -0.99
NSE1YLR007W PML39Q03760 334 aa8.82□□□□□ -1
NSE1YLR007W NOP53Q12080 455 aaKnown RBP8.82□□□□□ -1
NSE1YLR007W YDR344CQ05510 147 aa8.78□□□□□ -1
NSE1YLR007W ILV3P39522 585 aaKnown RBP8.77□□□□□ -1.01
NSE1YLR007W MPH3P0CE00 602 aa8.76□□□□□ -1.01
NSE1YLR007W AI4P03878 556 aa8.75□□□□□ -1.01
NSE1YLR007W MID1P41821 548 aa8.75□□□□□ -1.01
NSE1YLR007W YGR273CP53329 174 aa8.75□□□□□ -1.01
NSE1YLR007W PRE3P38624 215 aa8.74□□□□□ -1.01
NSE1YLR007W CHL1P22516 861 aaPredicted RBP8.73□□□□□ -1.01
NSE1YLR007W VPS70P47161 811 aa8.73□□□□□ -1.01
NSE1YLR007W YPR148CQ06523 435 aa8.73□□□□□ -1.01
NSE1YLR007W ELP4Q02884 456 aaKnown RBP8.65□□□□□ -1.02
NSE1YLR007W PEX29Q03370 554 aa8.64□□□□□ -1.03
NSE1YLR007W BCK2P33306 851 aa8.63□□□□□ -1.03
NSE1YLR007W ARH1P48360 493 aa8.63□□□□□ -1.03
NSE1YLR007W KEX1P09620 729 aa8.6□□□□□ -1.03
NSE1YLR007W SLI15P38283 698 aa8.6□□□□□ -1.03
NSE1YLR007W LEU3P08638 886 aa8.59□□□□□ -1.03
NSE1YLR007W MPC54Q08550 464 aa8.58□□□□□ -1.04
NSE1YLR007W VHR2P40041 505 aa8.57□□□□□ -1.04
NSE1YLR007W UBP14P38237 781 aaKnown RBP8.56□□□□□ -1.04
NSE1YLR007W YLR326WQ06170 240 aaKnown RBP8.56□□□□□ -1.04
NSE1YLR007W VRP1P37370 817 aa8.54□□□□□ -1.04
NSE1YLR007W HAP5Q02516 242 aa8.54□□□□□ -1.04
NSE1YLR007W SPT23P35210 1082 aa8.52□□□□□ -1.05
NSE1YLR007W SPB4P25808 606 aaPredicted RBP8.51□□□□□ -1.05
NSE1YLR007W LEO1P38439 464 aa8.51□□□□□ -1.05
NSE1YLR007W IFH1P39520 1085 aa8.51□□□□□ -1.05
NSE1YLR007W CKB1P43639 278 aa8.5□□□□□ -1.05
NSE1YLR007W NMA111P53920 997 aa8.5□□□□□ -1.05
NSE1YLR007W DPL1Q05567 589 aa8.5□□□□□ -1.05
NSE1YLR007W PCS60P38137 543 aaKnown RBP RIP-Chip data8.49□□□□□ -1.05not detected
NSE1YLR007W PBS2P08018 668 aa8.48□□□□□ -1.05
NSE1YLR007W BNI4P53858 892 aa8.48□□□□□ -1.05
NSE1YLR007W CDC73Q06697 393 aa8.48□□□□□ -1.05
NSE1YLR007W RAD54P32863 898 aa8.45□□□□□ -1.06
NSE1YLR007W XDJ1P39102 459 aa8.45□□□□□ -1.06
NSE1YLR007W YDR090CQ03193 310 aa8.45□□□□□ -1.06
NSE1YLR007W DSF2P38213 736 aa8.44□□□□□ -1.06
NSE1YLR007W PTC2P39966 464 aaKnown RBP8.43□□□□□ -1.06
NSE1YLR007W REF2P42073 533 aaPredicted RBP8.43□□□□□ -1.06
NSE1YLR007W YML082WQ04533 649 aaKnown RBP8.41□□□□□ -1.06
NSE1YLR007W ISU2Q12056 156 aa8.4□□□□□ -1.06
NSE1YLR007W IES2P40154 320 aa8.38□□□□□ -1.07
NSE1YLR007W YPR015CQ12531 247 aa8.37□□□□□ -1.07
NSE1YLR007W DIT2P21595 489 aa8.35□□□□□ -1.07
NSE1YLR007W RAM1P22007 431 aa8.35□□□□□ -1.07
NSE1YLR007W KIC1P38692 1080 aa8.35□□□□□ -1.07
NSE1YLR007W NUP42P49686 430 aaKnown RBP8.34□□□□□ -1.07
NSE1YLR007W PDR1P12383 1068 aa8.33□□□□□ -1.08
NSE1YLR007W RPN1P38764 993 aaKnown RBP8.33□□□□□ -1.08
NSE1YLR007W MAM3Q12296 706 aa8.33□□□□□ -1.08
NSE1YLR007W GLC3P32775 704 aa8.3□□□□□ -1.08
NSE1YLR007W COX6P00427 148 aa8.29□□□□□ -1.08
NSE1YLR007W RPP1BP10622 106 aaKnown RBP8.29□□□□□ -1.08
NSE1YLR007W DPS1P04802 557 aaKnown RBP8.28□□□□□ -1.08
NSE1YLR007W GAP1P19145 602 aaPredicted RBP8.27□□□□□ -1.09
NSE1YLR007W ORC6P38826 435 aa8.25□□□□□ -1.09
NSE1YLR007W YNR021WP53723 404 aaKnown RBP8.24□□□□□ -1.09
NSE1YLR007W YRR1Q12172 810 aa8.24□□□□□ -1.09
NSE1YLR007W MAK21Q12176 1025 aaKnown RBP8.24□□□□□ -1.09
NSE1YLR007W PEX21P50091 288 aa8.23□□□□□ -1.09
NSE1YLR007W DMA2P53924 522 aa8.23□□□□□ -1.09
NSE1YLR007W CSC1Q06538 782 aa8.22□□□□□ -1.09
NSE1YLR007W KIN1P13185 1064 aa8.21□□□□□ -1.1
NSE1YLR007W TAF7Q05021 590 aa8.2□□□□□ -1.1
NSE1YLR007W TFB4Q12004 338 aa8.2□□□□□ -1.1
NSE1YLR007W GYP1Q08484 637 aa8.19□□□□□ -1.1
NSE1YLR007W TUM1Q08686 304 aaKnown RBP8.19□□□□□ -1.1
NSE1YLR007W STR2P47164 639 aa8.16□□□□□ -1.1
NSE1YLR007W MVP1P40959 511 aaKnown RBP8.15□□□□□ -1.1
NSE1YLR007W BUD20Q08004 166 aaPredicted RBP8.15□□□□□ -1.1
NSE1YLR007W SDH2P21801 266 aa8.14□□□□□ -1.11
NSE1YLR007W ISM1P48526 1002 aa8.14□□□□□ -1.11
NSE1YLR007W RAS1P01119 309 aa8.13□□□□□ -1.11
NSE1YLR007W NUD1P32336 851 aa8.13□□□□□ -1.11
NSE1YLR007W RGR1P19263 1082 aa8.12□□□□□ -1.11
NSE1YLR007W SRC1Q03707 834 aa8.11□□□□□ -1.11
NSE1YLR007W SAS4Q04003 481 aa8.11□□□□□ -1.11
NSE1YLR007W YPR109WQ06104 294 aa8.1□□□□□ -1.11
NSE1YLR007W AIM7Q12156 149 aa8.09□□□□□ -1.11
NSE1YLR007W PRT1P06103 763 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms