RNA–Protein interactions for RNA: YKR077W

MSA2, Transcript of Putative transcriptional activator, yeastyeast

Gene MSA2, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSA2YKR077W JIP4Q03361 876 aa11.26□□□□□ -0.61
MSA2YKR077W GRE2Q12068 342 aaKnown RBP11.25□□□□□ -0.61
MSA2YKR077W EDS1P38073 919 aa11.24□□□□□ -0.61
MSA2YKR077W DAN4P47179 1161 aa11.23□□□□□ -0.61
MSA2YKR077W TFG1P41895 735 aaPredicted RBP11.22□□□□□ -0.61
MSA2YKR077W YEL023CP39992 682 aa11.21□□□□□ -0.61
MSA2YKR077W PTC3P34221 468 aaKnown RBP11.2□□□□□ -0.62
MSA2YKR077W COQ8P27697 501 aa11.19□□□□□ -0.62
MSA2YKR077W ATH1P48016 1211 aa11.18□□□□□ -0.62
MSA2YKR077W PTC4P38089 393 aa11.16□□□□□ -0.62
MSA2YKR077W GUT1P32190 709 aa11.13□□□□□ -0.63
MSA2YKR077W SAP30P38429 201 aa11.12□□□□□ -0.63
MSA2YKR077W YDL129WQ07555 291 aa11.12□□□□□ -0.63
MSA2YKR077W NST1P53935 1240 aa10.99□□□□□ -0.65
MSA2YKR077W PML39Q03760 334 aa10.99□□□□□ -0.65
MSA2YKR077W SOL3P38858 249 aa10.97□□□□□ -0.65
MSA2YKR077W NOP53Q12080 455 aaKnown RBP10.97□□□□□ -0.65
MSA2YKR077W CHL1P22516 861 aaPredicted RBP10.92□□□□□ -0.66
MSA2YKR077W PRE3P38624 215 aa10.92□□□□□ -0.66
MSA2YKR077W AI4P03878 556 aa10.89□□□□□ -0.67
MSA2YKR077W MPH3P0CE00 602 aa10.89□□□□□ -0.67
MSA2YKR077W YDR344CQ05510 147 aa10.88□□□□□ -0.67
MSA2YKR077W ILV3P39522 585 aaKnown RBP10.87□□□□□ -0.67
MSA2YKR077W YGR273CP53329 174 aa10.87□□□□□ -0.67
MSA2YKR077W MID1P41821 548 aa10.86□□□□□ -0.67
MSA2YKR077W SET1P38827 1080 aaKnown RBP10.84□□□□□ -0.67
MSA2YKR077W ELP4Q02884 456 aaKnown RBP10.83□□□□□ -0.68
MSA2YKR077W BCK2P33306 851 aa10.82□□□□□ -0.68
MSA2YKR077W PEX29Q03370 554 aa10.81□□□□□ -0.68
MSA2YKR077W SAS10Q12136 610 aaPredicted RBP10.79□□□□□ -0.68
MSA2YKR077W ARH1P48360 493 aa10.77□□□□□ -0.69
MSA2YKR077W IFH1P39520 1085 aa10.7□□□□□ -0.7
MSA2YKR077W SLI15P38283 698 aa10.69□□□□□ -0.7
MSA2YKR077W VRP1P37370 817 aa10.68□□□□□ -0.7
MSA2YKR077W MPC54Q08550 464 aa10.68□□□□□ -0.7
MSA2YKR077W KEX1P09620 729 aa10.67□□□□□ -0.7
MSA2YKR077W HAP5Q02516 242 aa10.67□□□□□ -0.7
MSA2YKR077W YPR148CQ06523 435 aa10.66□□□□□ -0.7
MSA2YKR077W SPT23P35210 1082 aa10.64□□□□□ -0.71
MSA2YKR077W VHR2P40041 505 aa10.62□□□□□ -0.71
MSA2YKR077W YLR326WQ06170 240 aaKnown RBP10.61□□□□□ -0.71
MSA2YKR077W VPS70P47161 811 aa10.6□□□□□ -0.71
MSA2YKR077W BNI4P53858 892 aa10.59□□□□□ -0.71
MSA2YKR077W DPL1Q05567 589 aa10.59□□□□□ -0.71
MSA2YKR077W UBP14P38237 781 aaKnown RBP10.58□□□□□ -0.72
MSA2YKR077W XDJ1P39102 459 aa10.58□□□□□ -0.72
MSA2YKR077W NMA111P53920 997 aa10.57□□□□□ -0.72
MSA2YKR077W PTC2P39966 464 aaKnown RBP10.54□□□□□ -0.72
MSA2YKR077W CKB1P43639 278 aa10.54□□□□□ -0.72
MSA2YKR077W RAD54P32863 898 aa10.52□□□□□ -0.73
MSA2YKR077W PCS60P38137 543 aaKnown RBP RIP-Chip data10.51□□□□□ -0.73not detected
MSA2YKR077W CDC73Q06697 393 aa10.51□□□□□ -0.73
MSA2YKR077W YML082WQ04533 649 aaKnown RBP10.48□□□□□ -0.73
MSA2YKR077W ISU2Q12056 156 aa10.47□□□□□ -0.73
MSA2YKR077W YDR090CQ03193 310 aa10.43□□□□□ -0.74
MSA2YKR077W KIC1P38692 1080 aa10.42□□□□□ -0.74
MSA2YKR077W REF2P42073 533 aaPredicted RBP10.41□□□□□ -0.74
MSA2YKR077W SPB4P25808 606 aaPredicted RBP10.4□□□□□ -0.74
MSA2YKR077W RPP1BP10622 106 aaKnown RBP10.39□□□□□ -0.75
MSA2YKR077W DPS1P04802 557 aaKnown RBP10.38□□□□□ -0.75
MSA2YKR077W LEU3P08638 886 aa10.38□□□□□ -0.75
MSA2YKR077W YPR015CQ12531 247 aa10.38□□□□□ -0.75
MSA2YKR077W RAM1P22007 431 aa10.36□□□□□ -0.75
MSA2YKR077W PBS2P08018 668 aa10.35□□□□□ -0.75
MSA2YKR077W PDR1P12383 1068 aa10.33□□□□□ -0.76
MSA2YKR077W DSF2P38213 736 aa10.31□□□□□ -0.76
MSA2YKR077W MAK21Q12176 1025 aaKnown RBP10.28□□□□□ -0.76
MSA2YKR077W PEX21P50091 288 aa10.27□□□□□ -0.77
MSA2YKR077W GAP1P19145 602 aaPredicted RBP10.24□□□□□ -0.77
MSA2YKR077W GYP1Q08484 637 aa10.24□□□□□ -0.77
MSA2YKR077W YRR1Q12172 810 aa10.24□□□□□ -0.77
MSA2YKR077W MAM3Q12296 706 aa10.24□□□□□ -0.77
MSA2YKR077W COX6P00427 148 aa10.23□□□□□ -0.77
MSA2YKR077W ORC6P38826 435 aa10.23□□□□□ -0.77
MSA2YKR077W CSC1Q06538 782 aa10.23□□□□□ -0.77
MSA2YKR077W TFB4Q12004 338 aa10.21□□□□□ -0.77
MSA2YKR077W LEO1P38439 464 aa10.18□□□□□ -0.78
MSA2YKR077W IES2P40154 320 aa10.17□□□□□ -0.78
MSA2YKR077W TUM1Q08686 304 aaKnown RBP10.17□□□□□ -0.78
MSA2YKR077W SAS4Q04003 481 aa10.13□□□□□ -0.79
MSA2YKR077W NUD1P32336 851 aa10.12□□□□□ -0.79
MSA2YKR077W RPN1P38764 993 aaKnown RBP10.12□□□□□ -0.79
MSA2YKR077W STR2P47164 639 aa10.12□□□□□ -0.79
MSA2YKR077W RAS1P01119 309 aa10.11□□□□□ -0.79
MSA2YKR077W SRC1Q03707 834 aa10.11□□□□□ -0.79
MSA2YKR077W BUD20Q08004 166 aaPredicted RBP10.11□□□□□ -0.79
MSA2YKR077W MVP1P40959 511 aaKnown RBP10.1□□□□□ -0.79
MSA2YKR077W ISM1P48526 1002 aa10.1□□□□□ -0.79
MSA2YKR077W NUP42P49686 430 aaKnown RBP10.1□□□□□ -0.79
MSA2YKR077W SDH2P21801 266 aa10.08□□□□□ -0.8
MSA2YKR077W AMS1P22855 1083 aa10.07□□□□□ -0.8
MSA2YKR077W YNR021WP53723 404 aaKnown RBP10.07□□□□□ -0.8
MSA2YKR077W PRT1P06103 763 aaKnown RBP10.06□□□□□ -0.8
MSA2YKR077W DIT2P21595 489 aa10.06□□□□□ -0.8
MSA2YKR077W NPL4P33755 580 aa10.05□□□□□ -0.8
MSA2YKR077W RGR1P19263 1082 aa10.04□□□□□ -0.8
MSA2YKR077W YPR109WQ06104 294 aa10.04□□□□□ -0.8
MSA2YKR077W YEL077CQ3E7X8 1277 aa10.02□□□□□ -0.81
MSA2YKR077W MRF1P30775 413 aaPredicted RBP10.01□□□□□ -0.81
MSA2YKR077W GLC3P32775 704 aa9.99□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms