RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C PTC3P34221 468 aaKnown RBP7.9□□□□□ -1.14
YPT52YKR014C EDS1P38073 919 aa7.9□□□□□ -1.14
YPT52YKR014C SEC61P32915 480 aa7.89□□□□□ -1.15
YPT52YKR014C ATH1P48016 1211 aa7.89□□□□□ -1.15
YPT52YKR014C IFH1P39520 1085 aa7.87□□□□□ -1.15
YPT52YKR014C GUT1P32190 709 aa7.85□□□□□ -1.15
YPT52YKR014C DCW1P36091 449 aa7.85□□□□□ -1.15
YPT52YKR014C HTA1P04911 132 aaKnown RBP7.84□□□□□ -1.15
YPT52YKR014C HTA2P04912 132 aa7.84□□□□□ -1.15
YPT52YKR014C TFG1P41895 735 aaPredicted RBP7.83□□□□□ -1.16
YPT52YKR014C DAN4P47179 1161 aa7.81□□□□□ -1.16
YPT52YKR014C JIP4Q03361 876 aa7.79□□□□□ -1.16
YPT52YKR014C SAP30P38429 201 aa7.78□□□□□ -1.16
YPT52YKR014C PTC4P38089 393 aa7.75□□□□□ -1.17
YPT52YKR014C YEL023CP39992 682 aa7.75□□□□□ -1.17
YPT52YKR014C YPR148CQ06523 435 aa7.73□□□□□ -1.17
YPT52YKR014C VPS70P47161 811 aa7.72□□□□□ -1.17
YPT52YKR014C YDL129WQ07555 291 aa7.72□□□□□ -1.17
YPT52YKR014C SAS10Q12136 610 aaPredicted RBP7.7□□□□□ -1.18
YPT52YKR014C YGR273CP53329 174 aa7.69□□□□□ -1.18
YPT52YKR014C CKB1P43639 278 aa7.68□□□□□ -1.18
YPT52YKR014C CHL1P22516 861 aaPredicted RBP7.67□□□□□ -1.18
YPT52YKR014C SOL3P38858 249 aa7.65□□□□□ -1.18
YPT52YKR014C AI4P03878 556 aa7.64□□□□□ -1.19
YPT52YKR014C BCK2P33306 851 aa7.64□□□□□ -1.19
YPT52YKR014C PRE3P38624 215 aa7.64□□□□□ -1.19
YPT52YKR014C MPH3P0CE00 602 aa7.63□□□□□ -1.19
YPT52YKR014C REF2P42073 533 aaPredicted RBP7.63□□□□□ -1.19
YPT52YKR014C VHR2P40041 505 aa7.61□□□□□ -1.19
YPT52YKR014C NST1P53935 1240 aa7.61□□□□□ -1.19
YPT52YKR014C KIC1P38692 1080 aa7.59□□□□□ -1.19
YPT52YKR014C PML39Q03760 334 aa7.59□□□□□ -1.19
YPT52YKR014C KEX1P09620 729 aa7.58□□□□□ -1.2
YPT52YKR014C UBP14P38237 781 aaKnown RBP7.57□□□□□ -1.2
YPT52YKR014C SPB4P25808 606 aaPredicted RBP7.56□□□□□ -1.2
YPT52YKR014C YDR344CQ05510 147 aa7.56□□□□□ -1.2
YPT52YKR014C YLR326WQ06170 240 aaKnown RBP7.56□□□□□ -1.2
YPT52YKR014C MAK21Q12176 1025 aaKnown RBP7.56□□□□□ -1.2
YPT52YKR014C RAD54P32863 898 aa7.55□□□□□ -1.2
YPT52YKR014C PBS2P08018 668 aa7.53□□□□□ -1.2
YPT52YKR014C PEX29Q03370 554 aa7.53□□□□□ -1.2
YPT52YKR014C RPP1BP10622 106 aaKnown RBP7.52□□□□□ -1.21
YPT52YKR014C ELP4Q02884 456 aaKnown RBP7.52□□□□□ -1.21
YPT52YKR014C COX6P00427 148 aa7.51□□□□□ -1.21
YPT52YKR014C VRP1P37370 817 aa7.51□□□□□ -1.21
YPT52YKR014C ILV3P39522 585 aaKnown RBP7.51□□□□□ -1.21
YPT52YKR014C SLI15P38283 698 aa7.5□□□□□ -1.21
YPT52YKR014C MID1P41821 548 aa7.5□□□□□ -1.21
YPT52YKR014C PCS60P38137 543 aaKnown RBP RIP-Chip data7.49□□□□□ -1.21not detected
YPT52YKR014C YDR090CQ03193 310 aa7.48□□□□□ -1.21
YPT52YKR014C MAM3Q12296 706 aa7.47□□□□□ -1.21
YPT52YKR014C DSF2P38213 736 aa7.45□□□□□ -1.22
YPT52YKR014C XDJ1P39102 459 aa7.45□□□□□ -1.22
YPT52YKR014C ARH1P48360 493 aa7.44□□□□□ -1.22
YPT52YKR014C DPL1Q05567 589 aa7.44□□□□□ -1.22
YPT52YKR014C MPC54Q08550 464 aa7.42□□□□□ -1.22
YPT52YKR014C NMA111P53920 997 aa7.39□□□□□ -1.23
YPT52YKR014C CDC73Q06697 393 aa7.39□□□□□ -1.23
YPT52YKR014C PEX21P50091 288 aa7.38□□□□□ -1.23
YPT52YKR014C HAP5Q02516 242 aa7.38□□□□□ -1.23
YPT52YKR014C IES2P40154 320 aa7.37□□□□□ -1.23
YPT52YKR014C ISU2Q12056 156 aa7.37□□□□□ -1.23
YPT52YKR014C SPT23P35210 1082 aa7.36□□□□□ -1.23
YPT52YKR014C CSC1Q06538 782 aa7.36□□□□□ -1.23
YPT52YKR014C ORC6P38826 435 aa7.33□□□□□ -1.24
YPT52YKR014C DPS1P04802 557 aaKnown RBP7.32□□□□□ -1.24
YPT52YKR014C LEU3P08638 886 aa7.32□□□□□ -1.24
YPT52YKR014C TFB4Q12004 338 aa7.32□□□□□ -1.24
YPT52YKR014C PSE1P32337 1089 aaKnown RBP7.31□□□□□ -1.24
YPT52YKR014C BNI4P53858 892 aa7.31□□□□□ -1.24
YPT52YKR014C PTC2P39966 464 aaKnown RBP7.3□□□□□ -1.24
YPT52YKR014C NUP42P49686 430 aaKnown RBP7.3□□□□□ -1.24
YPT52YKR014C GAP1P19145 602 aaPredicted RBP7.28□□□□□ -1.24
YPT52YKR014C MVP1P40959 511 aaKnown RBP7.28□□□□□ -1.24
YPT52YKR014C DIT2P21595 489 aa7.27□□□□□ -1.25
YPT52YKR014C TUM1Q08686 304 aaKnown RBP7.27□□□□□ -1.25
YPT52YKR014C YRR1Q12172 810 aa7.27□□□□□ -1.25
YPT52YKR014C RGR1P19263 1082 aa7.26□□□□□ -1.25
YPT52YKR014C YNR021WP53723 404 aaKnown RBP7.26□□□□□ -1.25
YPT52YKR014C ATF2P53296 535 aa7.25□□□□□ -1.25
YPT52YKR014C YML082WQ04533 649 aaKnown RBP7.25□□□□□ -1.25
YPT52YKR014C CLB5P30283 435 aa7.24□□□□□ -1.25
YPT52YKR014C YPR109WQ06104 294 aa7.23□□□□□ -1.25
YPT52YKR014C NPL4P33755 580 aa7.21□□□□□ -1.26
YPT52YKR014C RPN1P38764 993 aaKnown RBP7.21□□□□□ -1.26
YPT52YKR014C TEA1P47988 759 aa7.21□□□□□ -1.26
YPT52YKR014C PDR1P12383 1068 aa7.19□□□□□ -1.26
YPT52YKR014C GLC3P32775 704 aa7.18□□□□□ -1.26
YPT52YKR014C NUD1P32336 851 aa7.17□□□□□ -1.26
YPT52YKR014C AIM7Q12156 149 aa7.16□□□□□ -1.26
YPT52YKR014C RAM1P22007 431 aa7.14□□□□□ -1.27
YPT52YKR014C GYP1Q08484 637 aa7.14□□□□□ -1.27
YPT52YKR014C YPR015CQ12531 247 aa7.13□□□□□ -1.27
YPT52YKR014C SRC1Q03707 834 aa7.12□□□□□ -1.27
YPT52YKR014C SAS4Q04003 481 aa7.11□□□□□ -1.27
YPT52YKR014C YMR196WQ04336 1088 aa7.11□□□□□ -1.27
YPT52YKR014C GCD11P32481 527 aaKnown RBP7.1□□□□□ -1.27
YPT52YKR014C ISM1P48526 1002 aa7.1□□□□□ -1.27
YPT52YKR014C RAS1P01119 309 aa7.09□□□□□ -1.27
YPT52YKR014C PRT1P06103 763 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms