RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W SAP30P38429 201 aa10.38□□□□□ -0.75
SPC42YKL042W PTC4P38089 393 aa10.35□□□□□ -0.75
SPC42YKL042W YDL129WQ07555 291 aa10.34□□□□□ -0.75
SPC42YKL042W YEL023CP39992 682 aa10.33□□□□□ -0.76
SPC42YKL042W TAF7Q05021 590 aa10.28□□□□□ -0.76
SPC42YKL042W LEO1P38439 464 aa10.25□□□□□ -0.77
SPC42YKL042W CHL1P22516 861 aaPredicted RBP10.24□□□□□ -0.77
SPC42YKL042W GRE2Q12068 342 aaKnown RBP10.24□□□□□ -0.77
SPC42YKL042W MIF2P35201 549 aa10.23□□□□□ -0.77
SPC42YKL042W MAK11P20484 414 aaKnown RBP10.22□□□□□ -0.77
SPC42YKL042W RAM2P29703 316 aa10.22□□□□□ -0.77
SPC42YKL042W SAS10Q12136 610 aaPredicted RBP10.22□□□□□ -0.77
SPC42YKL042W PRE3P38624 215 aa10.2□□□□□ -0.78
SPC42YKL042W BCK2P33306 851 aa10.19□□□□□ -0.78
SPC42YKL042W EDS1P38073 919 aa10.18□□□□□ -0.78
SPC42YKL042W PTC3P34221 468 aaKnown RBP10.17□□□□□ -0.78
SPC42YKL042W ATH1P48016 1211 aa10.16□□□□□ -0.78
SPC42YKL042W GUT1P32190 709 aa10.15□□□□□ -0.78
SPC42YKL042W PML39Q03760 334 aa10.15□□□□□ -0.78
SPC42YKL042W YDR344CQ05510 147 aa10.11□□□□□ -0.79
SPC42YKL042W LEU3P08638 886 aa10.1□□□□□ -0.79
SPC42YKL042W COQ8P27697 501 aa10.09□□□□□ -0.79
SPC42YKL042W NST1P53935 1240 aa10.06□□□□□ -0.8
SPC42YKL042W SOL3P38858 249 aa10.04□□□□□ -0.8
SPC42YKL042W ELP4Q02884 456 aaKnown RBP10.04□□□□□ -0.8
SPC42YKL042W MID1P41821 548 aa10.02□□□□□ -0.81
SPC42YKL042W VRP1P37370 817 aa10.01□□□□□ -0.81
SPC42YKL042W XDJ1P39102 459 aa9.97□□□□□ -0.81
SPC42YKL042W ARH1P48360 493 aa9.97□□□□□ -0.81
SPC42YKL042W MPH3P0CE00 602 aa9.96□□□□□ -0.82
SPC42YKL042W AI4P03878 556 aa9.94□□□□□ -0.82
SPC42YKL042W SET1P38827 1080 aaKnown RBP9.92□□□□□ -0.82
SPC42YKL042W ILV3P39522 585 aaKnown RBP9.9□□□□□ -0.82
SPC42YKL042W NOP53Q12080 455 aaKnown RBP9.89□□□□□ -0.83
SPC42YKL042W PEX29Q03370 554 aa9.88□□□□□ -0.83
SPC42YKL042W SPT23P35210 1082 aa9.86□□□□□ -0.83
SPC42YKL042W YGR273CP53329 174 aa9.86□□□□□ -0.83
SPC42YKL042W HAP5Q02516 242 aa9.82□□□□□ -0.84
SPC42YKL042W YPR148CQ06523 435 aa9.82□□□□□ -0.84
SPC42YKL042W IFH1P39520 1085 aa9.81□□□□□ -0.84
SPC42YKL042W CKB1P43639 278 aa9.81□□□□□ -0.84
SPC42YKL042W VPS70P47161 811 aa9.81□□□□□ -0.84
SPC42YKL042W RPN1P38764 993 aaKnown RBP9.8□□□□□ -0.84
SPC42YKL042W SPB4P25808 606 aaPredicted RBP9.79□□□□□ -0.84
SPC42YKL042W MPC54Q08550 464 aa9.78□□□□□ -0.84
SPC42YKL042W DPS1P04802 557 aaKnown RBP9.75□□□□□ -0.85
SPC42YKL042W BNI4P53858 892 aa9.75□□□□□ -0.85
SPC42YKL042W SLI15P38283 698 aa9.74□□□□□ -0.85
SPC42YKL042W NMA111P53920 997 aa9.72□□□□□ -0.85
SPC42YKL042W YML082WQ04533 649 aaKnown RBP9.72□□□□□ -0.85
SPC42YKL042W PTC2P39966 464 aaKnown RBP9.71□□□□□ -0.86
SPC42YKL042W DPL1Q05567 589 aa9.67□□□□□ -0.86
SPC42YKL042W KEX1P09620 729 aa9.64□□□□□ -0.87
SPC42YKL042W PBS2P08018 668 aa9.6□□□□□ -0.87
SPC42YKL042W DSF2P38213 736 aa9.6□□□□□ -0.87
SPC42YKL042W DMA2P53924 522 aa9.58□□□□□ -0.88
SPC42YKL042W UBP14P38237 781 aaKnown RBP9.57□□□□□ -0.88
SPC42YKL042W ISU2Q12056 156 aa9.57□□□□□ -0.88
SPC42YKL042W YLR326WQ06170 240 aaKnown RBP9.55□□□□□ -0.88
SPC42YKL042W CDC73Q06697 393 aa9.55□□□□□ -0.88
SPC42YKL042W YPR015CQ12531 247 aa9.55□□□□□ -0.88
SPC42YKL042W RAM1P22007 431 aa9.53□□□□□ -0.88
SPC42YKL042W VHR2P40041 505 aa9.52□□□□□ -0.89
SPC42YKL042W SRC1Q03707 834 aa9.52□□□□□ -0.89
SPC42YKL042W REF2P42073 533 aaPredicted RBP9.49□□□□□ -0.89
SPC42YKL042W PCS60P38137 543 aaKnown RBP RIP-Chip data9.48□□□□□ -0.89not detected
SPC42YKL042W YNR021WP53723 404 aaKnown RBP9.48□□□□□ -0.89
SPC42YKL042W MAM3Q12296 706 aa9.48□□□□□ -0.89
SPC42YKL042W RAS1P01119 309 aa9.45□□□□□ -0.9
SPC42YKL042W PDR1P12383 1068 aa9.44□□□□□ -0.9
SPC42YKL042W RAD54P32863 898 aa9.44□□□□□ -0.9
SPC42YKL042W IES2P40154 320 aa9.43□□□□□ -0.9
SPC42YKL042W GYP1Q08484 637 aa9.42□□□□□ -0.9
SPC42YKL042W KIN1P13185 1064 aa9.41□□□□□ -0.9
SPC42YKL042W GLC3P32775 704 aa9.39□□□□□ -0.91
SPC42YKL042W MAK21Q12176 1025 aaKnown RBP9.39□□□□□ -0.91
SPC42YKL042W AIM7Q12156 149 aa9.37□□□□□ -0.91
SPC42YKL042W RPP1BP10622 106 aaKnown RBP9.36□□□□□ -0.91
SPC42YKL042W NUP42P49686 430 aaKnown RBP9.36□□□□□ -0.91
SPC42YKL042W YDR090CQ03193 310 aa9.36□□□□□ -0.91
SPC42YKL042W COX6P00427 148 aa9.34□□□□□ -0.91
SPC42YKL042W DIT2P21595 489 aa9.34□□□□□ -0.91
SPC42YKL042W SAS4Q04003 481 aa9.33□□□□□ -0.92
SPC42YKL042W AMS1P22855 1083 aa9.32□□□□□ -0.92
SPC42YKL042W SDH2P21801 266 aa9.31□□□□□ -0.92
SPC42YKL042W KIC1P38692 1080 aa9.3□□□□□ -0.92
SPC42YKL042W RLF2Q12495 606 aa9.3□□□□□ -0.92
SPC42YKL042W HGH1P48362 394 aaKnown RBP9.27□□□□□ -0.93
SPC42YKL042W ATF2P53296 535 aa9.27□□□□□ -0.93
SPC42YKL042W RGA2Q06407 1009 aa9.27□□□□□ -0.93
SPC42YKL042W YRR1Q12172 810 aa9.27□□□□□ -0.93
SPC42YKL042W BUD20Q08004 166 aaPredicted RBP9.26□□□□□ -0.93
SPC42YKL042W PEX21P50091 288 aa9.25□□□□□ -0.93
SPC42YKL042W GAP1P19145 602 aaPredicted RBP9.24□□□□□ -0.93
SPC42YKL042W TRK1P12685 1235 aa9.21□□□□□ -0.94
SPC42YKL042W CSC1Q06538 782 aa9.21□□□□□ -0.94
SPC42YKL042W PRT1P06103 763 aaKnown RBP9.2□□□□□ -0.94
SPC42YKL042W MRF1P30775 413 aaPredicted RBP9.2□□□□□ -0.94
SPC42YKL042W STR2P47164 639 aa9.2□□□□□ -0.94
SPC42YKL042W TUM1Q08686 304 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms