RNA–Protein interactions for RNA: YDL108W

KIN28, Transcript of Serine/threonine protein kinase, subunit of transcription factor TFIIH, yeastyeast

Gene KIN28, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KIN28YDL108W RAM2P29703 316 aa8.43□□□□□ -1.06
KIN28YDL108W DCW1P36091 449 aa8.4□□□□□ -1.06
KIN28YDL108W ABP1P15891 592 aaKnown RBP8.39□□□□□ -1.07
KIN28YDL108W PRE3P38624 215 aa8.39□□□□□ -1.07
KIN28YDL108W HTA1P04911 132 aaKnown RBP8.38□□□□□ -1.07
KIN28YDL108W HTA2P04912 132 aa8.38□□□□□ -1.07
KIN28YDL108W YEL023CP39992 682 aa8.37□□□□□ -1.07
KIN28YDL108W PTC4P38089 393 aa8.36□□□□□ -1.07
KIN28YDL108W MAK11P20484 414 aaKnown RBP8.32□□□□□ -1.08
KIN28YDL108W YDR344CQ05510 147 aa8.32□□□□□ -1.08
KIN28YDL108W SAS10Q12136 610 aaPredicted RBP8.31□□□□□ -1.08
KIN28YDL108W SET1P38827 1080 aaKnown RBP8.29□□□□□ -1.08
KIN28YDL108W VRP1P37370 817 aa8.25□□□□□ -1.09
KIN28YDL108W PML39Q03760 334 aa8.23□□□□□ -1.09
KIN28YDL108W XDJ1P39102 459 aa8.22□□□□□ -1.09
KIN28YDL108W COQ8P27697 501 aa8.2□□□□□ -1.1
KIN28YDL108W GRE2Q12068 342 aaKnown RBP8.2□□□□□ -1.1
KIN28YDL108W MIF2P35201 549 aa8.19□□□□□ -1.1
KIN28YDL108W IFH1P39520 1085 aa8.19□□□□□ -1.1
KIN28YDL108W ELP4Q02884 456 aaKnown RBP8.18□□□□□ -1.1
KIN28YDL108W VPS70P47161 811 aa8.15□□□□□ -1.1
KIN28YDL108W YPR148CQ06523 435 aa8.15□□□□□ -1.1
KIN28YDL108W DPS1P04802 557 aaKnown RBP8.1□□□□□ -1.11
KIN28YDL108W EDS1P38073 919 aa8.1□□□□□ -1.11
KIN28YDL108W MID1P41821 548 aa8.1□□□□□ -1.11
KIN28YDL108W CKB1P43639 278 aa8.1□□□□□ -1.11
KIN28YDL108W ARH1P48360 493 aa8.1□□□□□ -1.11
KIN28YDL108W NST1P53935 1240 aa8.1□□□□□ -1.11
KIN28YDL108W NOP53Q12080 455 aaKnown RBP8.1□□□□□ -1.11
KIN28YDL108W ATH1P48016 1211 aa8.09□□□□□ -1.11
KIN28YDL108W LEU3P08638 886 aa8.08□□□□□ -1.12
KIN28YDL108W GUT1P32190 709 aa8.08□□□□□ -1.12
KIN28YDL108W PTC3P34221 468 aaKnown RBP8.08□□□□□ -1.12
KIN28YDL108W SPB4P25808 606 aaPredicted RBP8.05□□□□□ -1.12
KIN28YDL108W SOL3P38858 249 aa8.03□□□□□ -1.12
KIN28YDL108W TAF7Q05021 590 aa8.02□□□□□ -1.13
KIN28YDL108W LEO1P38439 464 aa8.01□□□□□ -1.13
KIN28YDL108W SPT23P35210 1082 aa7.99□□□□□ -1.13
KIN28YDL108W ILV3P39522 585 aaKnown RBP7.97□□□□□ -1.13
KIN28YDL108W PEX29Q03370 554 aa7.97□□□□□ -1.13
KIN28YDL108W SRC1Q03707 834 aa7.97□□□□□ -1.13
KIN28YDL108W PBS2P08018 668 aa7.96□□□□□ -1.14
KIN28YDL108W MPH3P0CE00 602 aa7.96□□□□□ -1.14
KIN28YDL108W AI4P03878 556 aa7.95□□□□□ -1.14
KIN28YDL108W REF2P42073 533 aaPredicted RBP7.94□□□□□ -1.14
KIN28YDL108W HAP5Q02516 242 aa7.94□□□□□ -1.14
KIN28YDL108W DSF2P38213 736 aa7.91□□□□□ -1.14
KIN28YDL108W BNI4P53858 892 aa7.89□□□□□ -1.15
KIN28YDL108W RPN1P38764 993 aaKnown RBP7.87□□□□□ -1.15
KIN28YDL108W YML082WQ04533 649 aaKnown RBP7.87□□□□□ -1.15
KIN28YDL108W RGA2Q06407 1009 aa7.87□□□□□ -1.15
KIN28YDL108W MPC54Q08550 464 aa7.87□□□□□ -1.15
KIN28YDL108W MAM3Q12296 706 aa7.87□□□□□ -1.15
KIN28YDL108W VHR2P40041 505 aa7.86□□□□□ -1.15
KIN28YDL108W MAK21Q12176 1025 aaKnown RBP7.86□□□□□ -1.15
KIN28YDL108W PTC2P39966 464 aaKnown RBP7.85□□□□□ -1.15
KIN28YDL108W YGR273CP53329 174 aa7.83□□□□□ -1.16
KIN28YDL108W IES2P40154 320 aa7.82□□□□□ -1.16
KIN28YDL108W COX6P00427 148 aa7.81□□□□□ -1.16
KIN28YDL108W NMA111P53920 997 aa7.81□□□□□ -1.16
KIN28YDL108W KIC1P38692 1080 aa7.8□□□□□ -1.16
KIN28YDL108W UBP14P38237 781 aaKnown RBP7.79□□□□□ -1.16
KIN28YDL108W YLR326WQ06170 240 aaKnown RBP7.79□□□□□ -1.16
KIN28YDL108W RAS1P01119 309 aa7.78□□□□□ -1.16
KIN28YDL108W SLI15P38283 698 aa7.77□□□□□ -1.17
KIN28YDL108W RGA1P39083 1007 aa7.77□□□□□ -1.17
KIN28YDL108W YNR021WP53723 404 aaKnown RBP7.77□□□□□ -1.17
KIN28YDL108W KEX1P09620 729 aa7.76□□□□□ -1.17
KIN28YDL108W RAD54P32863 898 aa7.76□□□□□ -1.17
KIN28YDL108W YDR090CQ03193 310 aa7.76□□□□□ -1.17
KIN28YDL108W YPR015CQ12531 247 aa7.76□□□□□ -1.17
KIN28YDL108W DPL1Q05567 589 aa7.74□□□□□ -1.17
KIN28YDL108W NUP42P49686 430 aaKnown RBP7.73□□□□□ -1.17
KIN28YDL108W GLC3P32775 704 aa7.72□□□□□ -1.17
KIN28YDL108W DIT2P21595 489 aa7.71□□□□□ -1.18
KIN28YDL108W PCS60P38137 543 aaKnown RBP RIP-Chip data7.71□□□□□ -1.18 RIP-Chip
KIN28YDL108W RAM1P22007 431 aa7.68□□□□□ -1.18
KIN28YDL108W AIM7Q12156 149 aa7.67□□□□□ -1.18
KIN28YDL108W ATF2P53296 535 aa7.66□□□□□ -1.18
KIN28YDL108W KIN1P13185 1064 aa7.65□□□□□ -1.18
KIN28YDL108W ISU2Q12056 156 aa7.63□□□□□ -1.19
KIN28YDL108W RPP1BP10622 106 aaKnown RBP7.61□□□□□ -1.19
KIN28YDL108W PSE1P32337 1089 aaKnown RBP7.61□□□□□ -1.19
KIN28YDL108W CDC73Q06697 393 aa7.61□□□□□ -1.19
KIN28YDL108W AMS1P22855 1083 aa7.6□□□□□ -1.19
KIN28YDL108W ORC6P38826 435 aa7.6□□□□□ -1.19
KIN28YDL108W GYP1Q08484 637 aa7.6□□□□□ -1.19
KIN28YDL108W PDR1P12383 1068 aa7.58□□□□□ -1.2
KIN28YDL108W TRK1P12685 1235 aa7.58□□□□□ -1.2
KIN28YDL108W SDH2P21801 266 aa7.58□□□□□ -1.2
KIN28YDL108W DMA2P53924 522 aa7.56□□□□□ -1.2
KIN28YDL108W CSC1Q06538 782 aa7.53□□□□□ -1.2
KIN28YDL108W TEA1P47988 759 aa7.52□□□□□ -1.21
KIN28YDL108W PEX21P50091 288 aa7.52□□□□□ -1.21
KIN28YDL108W RGR1P19263 1082 aa7.51□□□□□ -1.21
KIN28YDL108W MVP1P40959 511 aaKnown RBP7.51□□□□□ -1.21
KIN28YDL108W CLB5P30283 435 aa7.5□□□□□ -1.21
KIN28YDL108W GAP1P19145 602 aaPredicted RBP7.49□□□□□ -1.21
KIN28YDL108W HGH1P48362 394 aaKnown RBP7.49□□□□□ -1.21
KIN28YDL108W SAS4Q04003 481 aa7.49□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 51.3 ms