RNA–Protein interactions for RNA: ENST00000641761.1

CCDC196-211, Transcript of coiled-coil domain containing 196, humanhuman

Gene CCDC196, Length 1,821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-211ENST00000641761 CHRDL2Q6WN34 429 aa9.27□□□□□ -0.93
CCDC196-211ENST00000641761 NPM2Q86SE8 214 aaKnown RBP9.27□□□□□ -0.93
CCDC196-211ENST00000641761 IFNLR1Q8IU57 520 aaPredicted RBP9.26□□□□□ -0.93
CCDC196-211ENST00000641761 SPDYE1Q8NFV5 336 aaPredicted RBP9.26□□□□□ -0.93
CCDC196-211ENST00000641761 BICRAQ9NZM4 1560 aa9.26□□□□□ -0.93
CCDC196-211ENST00000641761 CLEC11AQ9Y240 323 aa9.24□□□□□ -0.93
CCDC196-211ENST00000641761 SCRIBQ14160 1630 aa9.24□□□□□ -0.93
CCDC196-211ENST00000641761 PLCD3Q8N3E9 789 aa9.21□□□□□ -0.93
CCDC196-211ENST00000641761 MIER1Q8N108 512 aa9.21□□□□□ -0.94
CCDC196-211ENST00000641761 PITPNM1O00562 1244 aa9.2□□□□□ -0.94
CCDC196-211ENST00000641761 PRR29P0C7W0 189 aa9.17□□□□□ -0.94
CCDC196-211ENST00000641761 SP7Q8TDD2 431 aaPredicted RBP9.16□□□□□ -0.94
CCDC196-211ENST00000641761 TMEM132AQ24JP5 1023 aa9.15□□□□□ -0.94
CCDC196-211ENST00000641761 PLEKHG5O94827 1062 aa9.15□□□□□ -0.95
CCDC196-211ENST00000641761 BCL11AQ9H165 835 aa9.15□□□□□ -0.95
CCDC196-211ENST00000641761 SHROOM4Q9ULL8 1493 aa9.12□□□□□ -0.95
CCDC196-211ENST00000641761 HAP1P54257 671 aaPredicted RBP9.12□□□□□ -0.95
CCDC196-211ENST00000641761 C14orf37Q86TY3 774 aa9.12□□□□□ -0.95
CCDC196-211ENST00000641761 PIP4P2Q8N4L2 257 aa9.1□□□□□ -0.95
CCDC196-211ENST00000641761 SPOCK2Q92563 424 aa9.1□□□□□ -0.95
CCDC196-211ENST00000641761 CREBZFQ9NS37 354 aa9.1□□□□□ -0.95
CCDC196-211ENST00000641761 VSIG10Q8N0Z9 540 aa9.05□□□□□ -0.96
CCDC196-211ENST00000641761 ZBTB47Q9UFB7 747 aaPredicted RBP9.05□□□□□ -0.96
CCDC196-211ENST00000641761 FXR2P51116 673 aaKnown RBP eCLIP9.03□□□□□ -0.96
CCDC196-211ENST00000641761 EIF4G1Q04637 1599 aaKnown RBP9.03□□□□□ -0.96
CCDC196-211ENST00000641761 MNX1P50219 401 aaPredicted RBP9.03□□□□□ -0.96
CCDC196-211ENST00000641761 CHADLQ6NUI6 762 aa9.02□□□□□ -0.97
CCDC196-211ENST00000641761 PKD2Q13563 968 aa9.01□□□□□ -0.97
CCDC196-211ENST00000641761 CC2D2AQ9P2K1 1620 aa9.01□□□□□ -0.97
CCDC196-211ENST00000641761 NUBP1P53384 320 aa8.97□□□□□ -0.97
CCDC196-211ENST00000641761 TRIM26Q12899 539 aaPredicted RBP8.97□□□□□ -0.97
CCDC196-211ENST00000641761 CECR2Q9BXF3 1484 aa8.97□□□□□ -0.97
CCDC196-211ENST00000641761 PRKAR2AP13861 404 aaKnown RBP8.96□□□□□ -0.97
CCDC196-211ENST00000641761 EVX2Q03828 476 aa8.96□□□□□ -0.98
CCDC196-211ENST00000641761 CIZ1Q9ULV3 898 aaPredicted RBP8.95□□□□□ -0.98
CCDC196-211ENST00000641761 PDIA4P13667 645 aaKnown RBP8.94□□□□□ -0.98
CCDC196-211ENST00000641761 FARP1Q9Y4F1 1045 aaPredicted RBP8.92□□□□□ -0.98
CCDC196-211ENST00000641761 ECM2O94769 699 aaPredicted RBP8.91□□□□□ -0.98
CCDC196-211ENST00000641761 NPM1P06748 294 aaKnown RBP eCLIP8.91□□□□□ -0.98
CCDC196-211ENST00000641761 LOC105371045A0A1W2PR82 267 aa8.91□□□□□ -0.98
CCDC196-211ENST00000641761 RASEFQ8IZ41 740 aa8.91□□□□□ -0.98
CCDC196-211ENST00000641761 DCAF8Q5TAQ9 597 aa8.89□□□□□ -0.99
CCDC196-211ENST00000641761 UBE2Q2Q8WVN8 375 aa8.89□□□□□ -0.99
CCDC196-211ENST00000641761 FAM9AQ8IZU1 332 aaPredicted RBP8.88□□□□□ -0.99
CCDC196-211ENST00000641761 CDK11AQ9UQ88 783 aaPredicted RBP8.88□□□□□ -0.99
CCDC196-211ENST00000641761 GSE1Q14687 1217 aa8.87□□□□□ -0.99
CCDC196-211ENST00000641761 FAM212AQ96EL1 285 aa8.87□□□□□ -0.99
CCDC196-211ENST00000641761 HAX1O00165 279 aa8.87□□□□□ -0.99
CCDC196-211ENST00000641761 HRCP23327 699 aa8.85□□□□□ -0.99
CCDC196-211ENST00000641761 RGL2O15211 777 aa8.84□□□□□ -0.99
CCDC196-211ENST00000641761 DNAJC5Q9H3Z4 198 aa8.84□□□□□ -0.99
CCDC196-211ENST00000641761 TSPYL2Q9H2G4 693 aaPredicted RBP8.82□□□□□ -1
CCDC196-211ENST00000641761 TRIM41Q8WV44 630 aa8.81□□□□□ -1
CCDC196-211ENST00000641761 SUPT5HO00267 1087 aaKnown RBP8.8□□□□□ -1
CCDC196-211ENST00000641761 SMARCA4P51532 1647 aa8.8□□□□□ -1
CCDC196-211ENST00000641761 KDM2AQ9Y2K7 1162 aa8.8□□□□□ -1
CCDC196-211ENST00000641761 HMGB1P09429 215 aaKnown RBP8.79□□□□□ -1
CCDC196-211ENST00000641761 UBTFP17480 764 aaKnown RBP8.79□□□□□ -1
CCDC196-211ENST00000641761 CDK11BP21127 795 aaKnown RBP8.78□□□□□ -1
CCDC196-211ENST00000641761 RNF25Q96BH1 459 aaPredicted RBP8.77□□□□□ -1
CCDC196-211ENST00000641761 CHMP4AQ9BY43 222 aa8.77□□□□□ -1
CCDC196-211ENST00000641761 ATAD2BQ9ULI0 1458 aa8.77□□□□□ -1
CCDC196-211ENST00000641761 BAZ1AQ9NRL2 1556 aaPredicted RBP8.77□□□□□ -1.01
CCDC196-211ENST00000641761 PYGBP11216 843 aa8.77□□□□□ -1.01
CCDC196-211ENST00000641761 NCAPD3P42695 1498 aa8.76□□□□□ -1.01
CCDC196-211ENST00000641761 BRD2P25440 801 aaKnown RBP8.76□□□□□ -1.01
CCDC196-211ENST00000641761 C19orf67A6NJJ6 358 aa8.75□□□□□ -1.01
CCDC196-211ENST00000641761 SMARCA2P51531 1590 aa8.74□□□□□ -1.01
CCDC196-211ENST00000641761 CHRM1P11229 460 aaPredicted RBP8.74□□□□□ -1.01
CCDC196-211ENST00000641761 MROH2BQ7Z745 1585 aa8.74□□□□□ -1.01
CCDC196-211ENST00000641761 CCDC61Q9Y6R9 512 aa8.73□□□□□ -1.01
CCDC196-211ENST00000641761 NEFLP07196 543 aa8.73□□□□□ -1.01
CCDC196-211ENST00000641761 PDE4CQ08493 712 aa8.73□□□□□ -1.01
CCDC196-211ENST00000641761 HMGXB3Q12766 1538 aa8.72□□□□□ -1.01
CCDC196-211ENST00000641761 PAK3O75914 559 aaPredicted RBP8.72□□□□□ -1.01
CCDC196-211ENST00000641761 CD44P16070 742 aaKnown RBP8.72□□□□□ -1.01
CCDC196-211ENST00000641761 TAF7LQ5H9L4 462 aa8.72□□□□□ -1.01
CCDC196-211ENST00000641761 RIOK3O14730 519 aaKnown RBP8.71□□□□□ -1.01
CCDC196-211ENST00000641761 BAZ1BQ9UIG0 1483 aaKnown RBP8.7□□□□□ -1.02
CCDC196-211ENST00000641761 HSP90B1P14625 803 aaKnown RBP8.7□□□□□ -1.02
CCDC196-211ENST00000641761 PEG3Q9GZU2 1588 aa8.69□□□□□ -1.02
CCDC196-211ENST00000641761 ZRANB1Q9UGI0 708 aa8.69□□□□□ -1.02
CCDC196-211ENST00000641761 CHGAP10645 457 aaKnown RBP8.68□□□□□ -1.02
CCDC196-211ENST00000641761 PHF12Q96QT6 1004 aa8.65□□□□□ -1.02
CCDC196-211ENST00000641761 VGFO15240 615 aaPredicted RBP8.64□□□□□ -1.03
CCDC196-211ENST00000641761 PCDHB8Q9UN66 801 aa8.64□□□□□ -1.03
CCDC196-211ENST00000641761 PCDHB13Q9Y5F0 798 aa8.64□□□□□ -1.03
CCDC196-211ENST00000641761 WIZO95785 1651 aa8.64□□□□□ -1.03
CCDC196-211ENST00000641761 KIF12Q96FN5 646 aa8.64□□□□□ -1.03
CCDC196-211ENST00000641761 MAP3K13O43283 966 aa8.63□□□□□ -1.03
CCDC196-211ENST00000641761 GABBR2O75899 941 aa8.63□□□□□ -1.03
CCDC196-211ENST00000641761 ZNF467Q7Z7K2 595 aaPredicted RBP8.62□□□□□ -1.03
CCDC196-211ENST00000641761 HS6ST3Q8IZP7 471 aa8.62□□□□□ -1.03
CCDC196-211ENST00000641761 BBXQ8WY36 941 aaPredicted RBP8.62□□□□□ -1.03
CCDC196-211ENST00000641761 CCDC9Q9Y3X0 531 aaKnown RBP8.62□□□□□ -1.03
CCDC196-211ENST00000641761 NESP48681 1621 aa8.62□□□□□ -1.03
CCDC196-211ENST00000641761 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.61□□□□□ -1.03
CCDC196-211ENST00000641761 ZFP91Q96JP5 570 aaPredicted RBP8.61□□□□□ -1.03
CCDC196-211ENST00000641761 IFNL1Q8IU54 200 aa8.61□□□□□ -1.03
CCDC196-211ENST00000641761 ERCC6Q03468 1493 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms