RNA–Protein interactions for RNA: ENST00000641578.1

CASC19-240, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,061 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-240ENST00000641578 METRNQ9UJH8 293 aa16.53■□□□□ 0.24
CASC19-240ENST00000641578 POTEJP0CG39 1038 aa16.52■□□□□ 0.24
CASC19-240ENST00000641578 ATMINO43313 823 aaPredicted RBP16.5■□□□□ 0.23
CASC19-240ENST00000641578 C7P10643 843 aa16.47■□□□□ 0.23
CASC19-240ENST00000641578 SLC39A7Q92504 469 aa16.47■□□□□ 0.23
CASC19-240ENST00000641578 EHMT2Q96KQ7 1210 aa16.4■□□□□ 0.22
CASC19-240ENST00000641578 PCDH10Q9P2E7 1040 aa16.4■□□□□ 0.22
CASC19-240ENST00000641578 MAMSTRQ6ZN01 415 aa16.37■□□□□ 0.21
CASC19-240ENST00000641578 LCE2DQ5TA82 110 aaPredicted RBP16.36■□□□□ 0.21
CASC19-240ENST00000641578 ATN1P54259 1190 aaPredicted RBP16.32■□□□□ 0.2
CASC19-240ENST00000641578 TSPYL2Q9H2G4 693 aaPredicted RBP16.32■□□□□ 0.2
CASC19-240ENST00000641578 CCDC61Q9Y6R9 512 aa16.31■□□□□ 0.2
CASC19-240ENST00000641578 FAM163AQ96GL9 167 aaPredicted RBP16.25■□□□□ 0.19
CASC19-240ENST00000641578 SCUBE2Q9NQ36 999 aa16.25■□□□□ 0.19
CASC19-240ENST00000641578 POTEFA5A3E0 1075 aa16.24■□□□□ 0.19
CASC19-240ENST00000641578 KIF12Q96FN5 646 aa16.24■□□□□ 0.19
CASC19-240ENST00000641578 PROM2Q8N271 834 aa16.2■□□□□ 0.18
CASC19-240ENST00000641578 BMP2KQ9NSY1 1161 aaPredicted RBP16.2■□□□□ 0.18
CASC19-240ENST00000641578 TRPC6Q9Y210 931 aa16.19■□□□□ 0.18
CASC19-240ENST00000641578 MAP3K13O43283 966 aa16.11■□□□□ 0.17
CASC19-240ENST00000641578 TIE1P35590 1138 aa16.09■□□□□ 0.17
CASC19-240ENST00000641578 COLQQ9Y215 455 aaPredicted RBP16.06■□□□□ 0.16
CASC19-240ENST00000641578 RASEFQ8IZ41 740 aa16.04■□□□□ 0.16
CASC19-240ENST00000641578 TTLL13PA6NNM8 815 aa16.01■□□□□ 0.15
CASC19-240ENST00000641578 SEC24BO95487 1268 aa15.98■□□□□ 0.15
CASC19-240ENST00000641578 ABCC9O60706 1549 aa15.98■□□□□ 0.15
CASC19-240ENST00000641578 MIER1Q8N108 512 aa15.94■□□□□ 0.14
CASC19-240ENST00000641578 CDAN1Q8IWY9 1227 aa15.93■□□□□ 0.14
CASC19-240ENST00000641578 PLEKHG5O94827 1062 aa15.92■□□□□ 0.14
CASC19-240ENST00000641578 IER5LQ5T953 404 aa15.9■□□□□ 0.14
CASC19-240ENST00000641578 TRIM35Q9UPQ4 493 aa15.9■□□□□ 0.14
CASC19-240ENST00000641578 SGIP1Q9BQI5 828 aa15.86■□□□□ 0.13
CASC19-240ENST00000641578 PCDHB13Q9Y5F0 798 aa15.84■□□□□ 0.13
CASC19-240ENST00000641578 ST18O60284 1047 aa15.8■□□□□ 0.12
CASC19-240ENST00000641578 SLAIN1Q8ND83 568 aa15.8■□□□□ 0.12
CASC19-240ENST00000641578 IFNL1Q8IU54 200 aa15.76■□□□□ 0.11
CASC19-240ENST00000641578 NUBP1P53384 320 aa15.75■□□□□ 0.11
CASC19-240ENST00000641578 PLCD3Q8N3E9 789 aa15.73■□□□□ 0.11
CASC19-240ENST00000641578 TMEM106CQ9BVX2 250 aa15.71■□□□□ 0.11
CASC19-240ENST00000641578 PLCG2P16885 1265 aa15.68■□□□□ 0.1
CASC19-240ENST00000641578 IRX5P78411 483 aaPredicted RBP15.66■□□□□ 0.1
CASC19-240ENST00000641578 ZBTB47Q9UFB7 747 aaPredicted RBP15.64■□□□□ 0.09
CASC19-240ENST00000641578 FAM212AQ96EL1 285 aa15.59■□□□□ 0.09
CASC19-240ENST00000641578 MMRN1Q13201 1228 aa15.58■□□□□ 0.08
CASC19-240ENST00000641578 SPNS2Q8IVW8 549 aa15.57■□□□□ 0.08
CASC19-240ENST00000641578 TMEM121BQ9BXQ6 578 aaPredicted RBP15.56■□□□□ 0.08
CASC19-240ENST00000641578 OCEL1Q9H607 264 aa15.55■□□□□ 0.08
CASC19-240ENST00000641578 CCDC180Q9P1Z9 1646 aa15.54■□□□□ 0.08
CASC19-240ENST00000641578 SNPHO15079 494 aa15.48■□□□□ 0.07
CASC19-240ENST00000641578 MARVELD3Q96A59 401 aa15.48■□□□□ 0.07
CASC19-240ENST00000641578 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.47■□□□□ 0.07
CASC19-240ENST00000641578 PYGBP11216 843 aa15.43■□□□□ 0.06
CASC19-240ENST00000641578 PCDHB8Q9UN66 801 aa15.4■□□□□ 0.06
CASC19-240ENST00000641578 DCAF8Q5TAQ9 597 aa15.38■□□□□ 0.05
CASC19-240ENST00000641578 PDCD7Q8N8D1 485 aaKnown RBP15.35■□□□□ 0.05
CASC19-240ENST00000641578 EMP3P54852 163 aa15.28■□□□□ 0.04
CASC19-240ENST00000641578 POTEB3A0JP26 581 aa15.27■□□□□ 0.04
CASC19-240ENST00000641578 POTEBQ6S5H4 581 aa15.27■□□□□ 0.04
CASC19-240ENST00000641578 C3orf67Q6ZVT6 689 aa15.26■□□□□ 0.03
CASC19-240ENST00000641578 KRTAP3-3Q9BYR6 98 aa15.25■□□□□ 0.03
CASC19-240ENST00000641578 KRTAP3-2Q9BYR7 98 aa15.25■□□□□ 0.03
CASC19-240ENST00000641578 L3MBTL3Q96JM7 780 aaPredicted RBP15.22■□□□□ 0.03
CASC19-240ENST00000641578 HS3ST6Q96QI5 342 aa15.22■□□□□ 0.03
CASC19-240ENST00000641578 MKRN3Q13064 507 aaKnown RBP15.19■□□□□ 0.02
CASC19-240ENST00000641578 FKBP8Q14318 412 aa15.19■□□□□ 0.02
CASC19-240ENST00000641578 FAM205CA6NFA0 338 aa15.18■□□□□ 0.02
CASC19-240ENST00000641578 GOLGA2Q08379 1002 aa15.17■□□□□ 0.02
CASC19-240ENST00000641578 ZNF467Q7Z7K2 595 aaPredicted RBP15.17■□□□□ 0.02
CASC19-240ENST00000641578 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.14■□□□□ 0.017e-8■□□□□ 10.2
CASC19-240ENST00000641578 RB1CC1Q8TDY2 1594 aa15.1■□□□□ 0.01
CASC19-240ENST00000641578 GSE1Q14687 1217 aa15.09■□□□□ 0.01
CASC19-240ENST00000641578 ILDR1Q86SU0 546 aaPredicted RBP15.09■□□□□ 0.01
CASC19-240ENST00000641578 CHRM1P11229 460 aaPredicted RBP15.08■□□□□ 0
CASC19-240ENST00000641578 PSEN1P49768 467 aa15.07■□□□□ 0
CASC19-240ENST00000641578 DPY19L2Q6NUT2 758 aa15.05■□□□□ -0
CASC19-240ENST00000641578 FBXO3Q9UK99 471 aa15.04■□□□□ -0
CASC19-240ENST00000641578 HOXB3P14651 431 aaPredicted RBP15.02■□□□□ -0
CASC19-240ENST00000641578 KLHL34Q8N239 644 aa14.98□□□□□ -0.01
CASC19-240ENST00000641578 BOLA1Q9Y3E2 137 aa14.95□□□□□ -0.02
CASC19-240ENST00000641578 HOXB1P14653 301 aaPredicted RBP14.93□□□□□ -0.02
CASC19-240ENST00000641578 PDAP1Q13442 181 aaKnown RBP14.93□□□□□ -0.02
CASC19-240ENST00000641578 VASPP50552 380 aaPredicted RBP14.92□□□□□ -0.02
CASC19-240ENST00000641578 CABP2Q9NPB3 220 aa14.9□□□□□ -0.02
CASC19-240ENST00000641578 ZNF710Q8N1W2 664 aa14.88□□□□□ -0.03
CASC19-240ENST00000641578 NACADO15069 1562 aa14.88□□□□□ -0.03
CASC19-240ENST00000641578 G3V3G9 751 aa14.87□□□□□ -0.03
CASC19-240ENST00000641578 ERBB3P21860 1342 aa14.87□□□□□ -0.03
CASC19-240ENST00000641578 DOK7Q18PE1 504 aa14.84□□□□□ -0.03
CASC19-240ENST00000641578 RNF166Q96A37 237 aaPredicted RBP14.83□□□□□ -0.04
CASC19-240ENST00000641578 ZCCHC6Q5VYS8 1495 aaKnown RBP14.82□□□□□ -0.04
CASC19-240ENST00000641578 DCAF8L2P0C7V8 631 aa14.77□□□□□ -0.05
CASC19-240ENST00000641578 VARS2Q5ST30 1063 aaKnown RBP14.77□□□□□ -0.05
CASC19-240ENST00000641578 MYT1LQ9UL68 1186 aa14.74□□□□□ -0.05
CASC19-240ENST00000641578 RIMBP2O15034 1052 aa14.72□□□□□ -0.05
CASC19-240ENST00000641578 CIZ1Q9ULV3 898 aaPredicted RBP14.69□□□□□ -0.06
CASC19-240ENST00000641578 TMEM92Q6UXU6 159 aa14.68□□□□□ -0.06
CASC19-240ENST00000641578 ZNF687Q8N1G0 1237 aa14.68□□□□□ -0.06
CASC19-240ENST00000641578 EFCAB3Q8N7B9 438 aa14.66□□□□□ -0.06
CASC19-240ENST00000641578 SPOCK2Q92563 424 aa14.66□□□□□ -0.06
CASC19-240ENST00000641578 ZSWIM6Q9HCJ5 1215 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms