RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 WRNQ14191 1432 aaPredicted RBP eCLIP14.39□□□□□ -0.11
PHGDH-217ENST00000641455 DIP2BQ9P265 1576 aa14.37□□□□□ -0.11
PHGDH-217ENST00000641455 TSPOAP1O95153 1857 aa14.36□□□□□ -0.11
PHGDH-217ENST00000641455 JPH4Q96JJ6 628 aa14.36□□□□□ -0.11
PHGDH-217ENST00000641455 MAPKBP1O60336 1514 aa14.36□□□□□ -0.11
PHGDH-217ENST00000641455 ERICH3Q5RHP9 1530 aa14.32□□□□□ -0.12
PHGDH-217ENST00000641455 ADCY10Q96PN6 1610 aa14.3□□□□□ -0.12
PHGDH-217ENST00000641455 RUSC2Q8N2Y8 1516 aa14.28□□□□□ -0.12
PHGDH-217ENST00000641455 TOP2BQ02880 1626 aa14.26□□□□□ -0.13
PHGDH-217ENST00000641455 BIVM-ERCC5R4GMW8 1640 aa14.26□□□□□ -0.13
PHGDH-217ENST00000641455 ADGRL1O94910 1474 aa14.24□□□□□ -0.13
PHGDH-217ENST00000641455 TTBK1Q5TCY1 1321 aaPredicted RBP14.21□□□□□ -0.13
PHGDH-217ENST00000641455 HECW2Q9P2P5 1572 aa14.19□□□□□ -0.14
PHGDH-217ENST00000641455 SUPT5HO00267 1087 aaKnown RBP14.14□□□□□ -0.15
PHGDH-217ENST00000641455 KIAA0586Q9BVV6 1533 aa14.14□□□□□ -0.15
PHGDH-217ENST00000641455 PTPRGP23470 1445 aa14.14□□□□□ -0.15
PHGDH-217ENST00000641455 PPRC1Q5VV67 1664 aaKnown RBP14.13□□□□□ -0.15
PHGDH-217ENST00000641455 ASXL2Q76L83 1435 aa14.12□□□□□ -0.15
PHGDH-217ENST00000641455 PLB1Q6P1J6 1458 aa14.11□□□□□ -0.15
PHGDH-217ENST00000641455 ABCC2Q92887 1545 aa14.1□□□□□ -0.15
PHGDH-217ENST00000641455 GLI2P10070 1586 aa14.09□□□□□ -0.15
PHGDH-217ENST00000641455 CUL7Q14999 1698 aa14.07□□□□□ -0.16
PHGDH-217ENST00000641455 TNIKQ9UKE5 1360 aa14.07□□□□□ -0.16
PHGDH-217ENST00000641455 CARMIL2Q6F5E8 1435 aa14.06□□□□□ -0.16
PHGDH-217ENST00000641455 COL17A1Q9UMD9 1497 aaPredicted RBP14.06□□□□□ -0.16
PHGDH-217ENST00000641455 TEX14Q8IWB6 1497 aa14.04□□□□□ -0.16
PHGDH-217ENST00000641455 FBXO41Q8TF61 875 aa14.03□□□□□ -0.16
PHGDH-217ENST00000641455 MAP3K4Q9Y6R4 1608 aa14.01□□□□□ -0.17
PHGDH-217ENST00000641455 EPRSP07814 1512 aaKnown RBP14.01□□□□□ -0.17
PHGDH-217ENST00000641455 IGF1RP08069 1367 aa14.01□□□□□ -0.17
PHGDH-217ENST00000641455 KIF27Q86VH2 1401 aa14□□□□□ -0.17
PHGDH-217ENST00000641455 UACAQ9BZF9 1416 aa14□□□□□ -0.17
PHGDH-217ENST00000641455 UHRF1BP1LA0JNW5 1464 aa13.99□□□□□ -0.17
PHGDH-217ENST00000641455 IQGAP2Q13576 1575 aa13.96□□□□□ -0.17
PHGDH-217ENST00000641455 ZCCHC11Q5TAX3 1644 aaKnown RBP13.95□□□□□ -0.18
PHGDH-217ENST00000641455 CARMIL1Q5VZK9 1371 aa13.95□□□□□ -0.18
PHGDH-217ENST00000641455 KDM5BQ9UGL1 1544 aa13.94□□□□□ -0.18
PHGDH-217ENST00000641455 KIF21BO75037 1637 aa13.91□□□□□ -0.18
PHGDH-217ENST00000641455 DISP1Q96F81 1524 aa13.9□□□□□ -0.18
PHGDH-217ENST00000641455 WDR7Q9Y4E6 1490 aa13.9□□□□□ -0.18
PHGDH-217ENST00000641455 CD109Q6YHK3 1445 aa13.88□□□□□ -0.19
PHGDH-217ENST00000641455 KCNH8Q96L42 1107 aa13.87□□□□□ -0.19
PHGDH-217ENST00000641455 KIAA0556O60303 1618 aa13.85□□□□□ -0.19
PHGDH-217ENST00000641455 CFAP43Q8NDM7 1665 aa13.85□□□□□ -0.19
PHGDH-217ENST00000641455 MAGI3Q5TCQ9 1506 aa13.85□□□□□ -0.19
PHGDH-217ENST00000641455 LMTK3Q96Q04 1460 aa13.83□□□□□ -0.2
PHGDH-217ENST00000641455 UGGT2Q9NYU1 1516 aa13.83□□□□□ -0.2
PHGDH-217ENST00000641455 PTPRMP28827 1452 aa13.81□□□□□ -0.2
PHGDH-217ENST00000641455 PCF11O94913 1555 aaKnown RBP13.77□□□□□ -0.21
PHGDH-217ENST00000641455 ADAMTSL3P82987 1691 aa13.77□□□□□ -0.21
PHGDH-217ENST00000641455 RAPGEF2Q9Y4G8 1499 aa13.76□□□□□ -0.21
PHGDH-217ENST00000641455 ARID4BQ4LE39 1312 aaPredicted RBP13.76□□□□□ -0.21
PHGDH-217ENST00000641455 ARAP3Q8WWN8 1544 aa13.74□□□□□ -0.21
PHGDH-217ENST00000641455 MADDQ8WXG6 1647 aa13.73□□□□□ -0.21
PHGDH-217ENST00000641455 ARID3CA6NKF2 412 aa13.73□□□□□ -0.21
PHGDH-217ENST00000641455 ABCA8O94911 1581 aa13.73□□□□□ -0.21
PHGDH-217ENST00000641455 PLPPR3Q6T4P5 718 aa13.72□□□□□ -0.21
PHGDH-217ENST00000641455 GOLGA3Q08378 1498 aa13.72□□□□□ -0.21
PHGDH-217ENST00000641455 BCORL1Q5H9F3 1711 aa13.71□□□□□ -0.21
PHGDH-217ENST00000641455 CTTNBP2Q8WZ74 1663 aa13.7□□□□□ -0.22
PHGDH-217ENST00000641455 RAPGEF3O95398 923 aa13.7□□□□□ -0.22
PHGDH-217ENST00000641455 DISP3Q9P2K9 1392 aa13.7□□□□□ -0.22
PHGDH-217ENST00000641455 HSPA2P54652 639 aa13.69□□□□□ -0.22
PHGDH-217ENST00000641455 RIMS1Q86UR5 1692 aaKnown RBP13.69□□□□□ -0.22
PHGDH-217ENST00000641455 FAM9AQ8IZU1 332 aaPredicted RBP13.67□□□□□ -0.22
PHGDH-217ENST00000641455 CERKQ8TCT0 537 aa13.67□□□□□ -0.22
PHGDH-217ENST00000641455 PHLDB1Q86UU1 1377 aa13.67□□□□□ -0.22
PHGDH-217ENST00000641455 SOCS7O14512 581 aa13.65□□□□□ -0.22
PHGDH-217ENST00000641455 ILDR2Q71H61 639 aa13.65□□□□□ -0.22
PHGDH-217ENST00000641455 ABCA9Q8IUA7 1624 aa13.64□□□□□ -0.23
PHGDH-217ENST00000641455 FRMPD1Q5SYB0 1578 aa13.62□□□□□ -0.23
PHGDH-217ENST00000641455 NEO1Q92859 1461 aa13.62□□□□□ -0.23
PHGDH-217ENST00000641455 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.61□□□□□ -0.23
PHGDH-217ENST00000641455 HNRNPUL2Q1KMD3 747 aaKnown RBP13.61□□□□□ -0.23
PHGDH-217ENST00000641455 ATP10BO94823 1461 aa13.61□□□□□ -0.23
PHGDH-217ENST00000641455 ARHGEF40Q8TER5 1519 aa13.6□□□□□ -0.23
PHGDH-217ENST00000641455 P3H3Q8IVL6 736 aa13.6□□□□□ -0.23
PHGDH-217ENST00000641455 POGZQ7Z3K3 1410 aa13.58□□□□□ -0.24
PHGDH-217ENST00000641455 FANCAO15360 1455 aa13.56□□□□□ -0.24
PHGDH-217ENST00000641455 MLECQ14165 292 aa13.56□□□□□ -0.24
PHGDH-217ENST00000641455 DENND4BO75064 1496 aaPredicted RBP13.55□□□□□ -0.24
PHGDH-217ENST00000641455 SPATA31D1Q6ZQQ2 1576 aa13.55□□□□□ -0.24
PHGDH-217ENST00000641455 AKNAQ7Z591 1439 aa13.55□□□□□ -0.24
PHGDH-217ENST00000641455 RICTORQ6R327 1708 aa13.53□□□□□ -0.24
PHGDH-217ENST00000641455 FER1L4A9Z1Z3 1794 aa13.53□□□□□ -0.24
PHGDH-217ENST00000641455 RAPGEF6Q8TEU7 1601 aa13.52□□□□□ -0.25
PHGDH-217ENST00000641455 ZFYVE16Q7Z3T8 1539 aa13.51□□□□□ -0.25
PHGDH-217ENST00000641455 CFAP74Q9C0B2 1584 aa13.49□□□□□ -0.25
PHGDH-217ENST00000641455 EFCAB5A4FU69 1503 aa13.49□□□□□ -0.25
PHGDH-217ENST00000641455 FHOD3Q2V2M9 1422 aa13.49□□□□□ -0.25
PHGDH-217ENST00000641455 YEATS2Q9ULM3 1422 aa13.48□□□□□ -0.25
PHGDH-217ENST00000641455 SIGLEC1Q9BZZ2 1709 aa13.48□□□□□ -0.25
PHGDH-217ENST00000641455 TTC37Q6PGP7 1564 aa13.48□□□□□ -0.25
PHGDH-217ENST00000641455 PREX1Q8TCU6 1659 aa13.47□□□□□ -0.25
PHGDH-217ENST00000641455 DMRT2Q9Y5R5 561 aa13.47□□□□□ -0.25
PHGDH-217ENST00000641455 ZMYM4Q5VZL5 1548 aa13.47□□□□□ -0.25
PHGDH-217ENST00000641455 PRXQ9BXM0 1461 aa13.47□□□□□ -0.25
PHGDH-217ENST00000641455 PLEKHD1A6NEE1 506 aa13.46□□□□□ -0.25
PHGDH-217ENST00000641455 NUP153P49790 1475 aaKnown RBP13.44□□□□□ -0.26
PHGDH-217ENST00000641455 RANGAP1P46060 587 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms