RNA–Protein interactions for RNA: ENST00000641104.1

MACF1-235, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-235ENST00000641104 KCNH8Q96L42 1107 aa15.91■□□□□ 0.14
MACF1-235ENST00000641104 PPP1R15AO75807 674 aaPredicted RBP15.9■□□□□ 0.14
MACF1-235ENST00000641104 GOLGA3Q08378 1498 aa15.9■□□□□ 0.14
MACF1-235ENST00000641104 HIRIP3Q9BW71 556 aaPredicted RBP15.87■□□□□ 0.13
MACF1-235ENST00000641104 MIER1Q8N108 512 aa15.84■□□□□ 0.13
MACF1-235ENST00000641104 CEP162Q5TB80 1403 aa15.83■□□□□ 0.12
MACF1-235ENST00000641104 CDCA8Q53HL2 280 aa15.82■□□□□ 0.12
MACF1-235ENST00000641104 C14orf37Q86TY3 774 aa15.82■□□□□ 0.12
MACF1-235ENST00000641104 WRNQ14191 1432 aaPredicted RBP eCLIP15.81■□□□□ 0.12
MACF1-235ENST00000641104 CFDP1Q9UEE9 299 aaPredicted RBP15.81■□□□□ 0.12
MACF1-235ENST00000641104 RGL3Q3MIN7 710 aa15.81■□□□□ 0.12
MACF1-235ENST00000641104 ZBTB7CA1YPR0 619 aa15.81■□□□□ 0.12
MACF1-235ENST00000641104 A0A0G2JS52 829 aa15.8■□□□□ 0.12
MACF1-235ENST00000641104 EIF5BO60841 1220 aaKnown RBP15.8■□□□□ 0.12
MACF1-235ENST00000641104 CFAP53Q96M91 514 aa15.8■□□□□ 0.12
MACF1-235ENST00000641104 KIF27Q86VH2 1401 aa15.79■□□□□ 0.12
MACF1-235ENST00000641104 IRX6P78412 446 aaPredicted RBP15.78■□□□□ 0.12
MACF1-235ENST00000641104 BAZ1BQ9UIG0 1483 aaKnown RBP15.78■□□□□ 0.12
MACF1-235ENST00000641104 SENP3Q9H4L4 574 aaPredicted RBP15.78■□□□□ 0.12
MACF1-235ENST00000641104 NBR1Q14596 966 aa15.77■□□□□ 0.11
MACF1-235ENST00000641104 KNSTRNQ9Y448 316 aa15.76■□□□□ 0.11
MACF1-235ENST00000641104 NACADO15069 1562 aa15.74■□□□□ 0.11
MACF1-235ENST00000641104 PLEKHG5O94827 1062 aa15.74■□□□□ 0.11
MACF1-235ENST00000641104 ARID4BQ4LE39 1312 aaPredicted RBP15.73■□□□□ 0.11
MACF1-235ENST00000641104 CEP164Q9UPV0 1460 aa15.73■□□□□ 0.11
MACF1-235ENST00000641104 TNIKQ9UKE5 1360 aa15.72■□□□□ 0.11
MACF1-235ENST00000641104 BECN1Q14457 450 aa15.72■□□□□ 0.11
MACF1-235ENST00000641104 CARD11Q9BXL7 1154 aa15.72■□□□□ 0.11
MACF1-235ENST00000641104 DDRGK1Q96HY6 314 aa15.71■□□□□ 0.11
MACF1-235ENST00000641104 ARXQ96QS3 562 aa15.71■□□□□ 0.11
MACF1-235ENST00000641104 HAP1P54257 671 aaPredicted RBP15.68■□□□□ 0.1
MACF1-235ENST00000641104 NCLP19338 710 aaKnown RBP15.67■□□□□ 0.1
MACF1-235ENST00000641104 PPM1GO15355 546 aaPredicted RBP15.66■□□□□ 0.1
MACF1-235ENST00000641104 CDK11BP21127 795 aaKnown RBP15.65■□□□□ 0.1
MACF1-235ENST00000641104 NUDCQ9Y266 331 aa15.64■□□□□ 0.1
MACF1-235ENST00000641104 MAPK8IP3Q9UPT6 1336 aa15.64■□□□□ 0.09
MACF1-235ENST00000641104 GOLGA6L22H0YM25 854 aa15.64■□□□□ 0.09
MACF1-235ENST00000641104 ANP32EQ9BTT0 268 aa15.64■□□□□ 0.09
MACF1-235ENST00000641104 FTSJ3Q8IY81 847 aaKnown RBP15.63■□□□□ 0.09
MACF1-235ENST00000641104 GLIPR1L2Q4G1C9 344 aa15.63■□□□□ 0.09
MACF1-235ENST00000641104 POGKQ9P215 609 aa15.63■□□□□ 0.09
MACF1-235ENST00000641104 ERCC6Q03468 1493 aa15.62■□□□□ 0.09
MACF1-235ENST00000641104 CASC1Q6TDU7 716 aa15.62■□□□□ 0.09
MACF1-235ENST00000641104 MYO15BQ96JP2 1530 aa15.61■□□□□ 0.09
MACF1-235ENST00000641104 CCNB3Q8WWL7 1395 aa15.6■□□□□ 0.09
MACF1-235ENST00000641104 FHAD1B1AJZ9 1412 aa15.59■□□□□ 0.09
MACF1-235ENST00000641104 NEUROD2Q15784 382 aa15.58■□□□□ 0.09
MACF1-235ENST00000641104 LAS1LQ9Y4W2 734 aaKnown RBP15.57■□□□□ 0.08
MACF1-235ENST00000641104 SIN3AQ96ST3 1273 aa15.56■□□□□ 0.08
MACF1-235ENST00000641104 SUPT16HQ9Y5B9 1047 aaKnown RBP15.56■□□□□ 0.08
MACF1-235ENST00000641104 BAZ1AQ9NRL2 1556 aaPredicted RBP15.55■□□□□ 0.08
MACF1-235ENST00000641104 SENP3-EIF4A1A0A087X0R7 540 aa15.55■□□□□ 0.08
MACF1-235ENST00000641104 CHMP4BQ9H444 224 aaKnown RBP15.55■□□□□ 0.08
MACF1-235ENST00000641104 TRIM44Q96DX7 344 aaPredicted RBP15.55■□□□□ 0.08
MACF1-235ENST00000641104 LMOD2Q6P5Q4 547 aa15.54■□□□□ 0.08
MACF1-235ENST00000641104 PNNQ9H307 717 aaKnown RBP15.53■□□□□ 0.08
MACF1-235ENST00000641104 KANK1Q14678 1352 aa15.53■□□□□ 0.08
MACF1-235ENST00000641104 ZRSR1Q15695 479 aaKnown RBP15.52■□□□□ 0.08
MACF1-235ENST00000641104 MS4A1P11836 297 aa15.52■□□□□ 0.08
MACF1-235ENST00000641104 TMF1P82094 1093 aa15.52■□□□□ 0.07
MACF1-235ENST00000641104 CARMIL1Q5VZK9 1371 aa15.52■□□□□ 0.07
MACF1-235ENST00000641104 CC2D1BQ5T0F9 858 aaKnown RBP15.5■□□□□ 0.07
MACF1-235ENST00000641104 TNNT2P45379 298 aaPredicted RBP15.5■□□□□ 0.07
MACF1-235ENST00000641104 HDGFP51858 240 aaKnown RBP15.5■□□□□ 0.07
MACF1-235ENST00000641104 FRAT1Q92837 279 aaPredicted RBP15.5■□□□□ 0.07
MACF1-235ENST00000641104 PPP4R2Q9NY27 417 aa15.49■□□□□ 0.07
MACF1-235ENST00000641104 U2SURPO15042 1029 aaKnown RBP15.49■□□□□ 0.07
MACF1-235ENST00000641104 DCAF11Q8TEB1 546 aa15.49■□□□□ 0.07
MACF1-235ENST00000641104 TIMELESSQ9UNS1 1208 aa15.48■□□□□ 0.07
MACF1-235ENST00000641104 EIF4G1Q04637 1599 aaKnown RBP15.48■□□□□ 0.07
MACF1-235ENST00000641104 CUX2O14529 1486 aa15.48■□□□□ 0.07
MACF1-235ENST00000641104 RGS3P49796 1198 aa15.45■□□□□ 0.06
MACF1-235ENST00000641104 PTMAP06454 111 aaKnown RBP15.44■□□□□ 0.06
MACF1-235ENST00000641104 OS9Q13438 667 aaPredicted RBP15.44■□□□□ 0.06
MACF1-235ENST00000641104 NPHP1O15259 732 aa15.42■□□□□ 0.06
MACF1-235ENST00000641104 SRPK2P78362 688 aaKnown RBP15.41■□□□□ 0.06
MACF1-235ENST00000641104 MORC1Q86VD1 984 aa15.39■□□□□ 0.05
MACF1-235ENST00000641104 CECR2Q9BXF3 1484 aa15.39■□□□□ 0.05
MACF1-235ENST00000641104 MLECQ14165 292 aa15.38■□□□□ 0.05
MACF1-235ENST00000641104 SETD5Q9C0A6 1442 aa15.38■□□□□ 0.05
MACF1-235ENST00000641104 ARHGAP35Q9NRY4 1499 aa15.38■□□□□ 0.05
MACF1-235ENST00000641104 SOGA1O94964 1423 aa15.38■□□□□ 0.05
MACF1-235ENST00000641104 FGD1P98174 961 aa15.37■□□□□ 0.05
MACF1-235ENST00000641104 TPRNQ4KMQ1 711 aa15.37■□□□□ 0.05
MACF1-235ENST00000641104 HSP90AB1P08238 724 aaKnown RBP15.36■□□□□ 0.05
MACF1-235ENST00000641104 KCNJ4P48050 445 aa15.36■□□□□ 0.05
MACF1-235ENST00000641104 CARMIL2Q6F5E8 1435 aa15.36■□□□□ 0.05
MACF1-235ENST00000641104 CCER2I3L3R5 266 aa15.35■□□□□ 0.05
MACF1-235ENST00000641104 TRHP20396 242 aaPredicted RBP15.35■□□□□ 0.05
MACF1-235ENST00000641104 PKD2Q13563 968 aa15.35■□□□□ 0.05
MACF1-235ENST00000641104 GGT6Q6P531 493 aa15.34■□□□□ 0.05
MACF1-235ENST00000641104 VPS8Q8N3P4 1428 aa15.34■□□□□ 0.05
MACF1-235ENST00000641104 DNTTIP2Q5QJE6 756 aaKnown RBP15.34■□□□□ 0.05
MACF1-235ENST00000641104 GOLGA2Q08379 1002 aa15.33■□□□□ 0.05
MACF1-235ENST00000641104 HSPA5P11021 654 aaKnown RBP15.33■□□□□ 0.04
MACF1-235ENST00000641104 SAFB2Q14151 953 aaKnown RBP eCLIP15.33■□□□□ 0.042e-7■■■■□ 19.8
MACF1-235ENST00000641104 SOX12O15370 315 aa15.33■□□□□ 0.04
MACF1-235ENST00000641104 HDGFL2Q7Z4V5 671 aaPredicted RBP15.32■□□□□ 0.04
MACF1-235ENST00000641104 RTF1Q92541 710 aaKnown RBP15.31■□□□□ 0.04
MACF1-235ENST00000641104 B4GALNT3Q6L9W6 998 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms