RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 FHAD1B1AJZ9 1412 aa26.61■■□□□ 1.85
PHGDH-208ENST00000641023 CTTNBP2Q8WZ74 1663 aa26.61■■□□□ 1.85
PHGDH-208ENST00000641023 ZNF608Q9ULD9 1512 aaPredicted RBP26.61■■□□□ 1.85
PHGDH-208ENST00000641023 EFCAB5A4FU69 1503 aa26.54■■□□□ 1.84
PHGDH-208ENST00000641023 ADAMTS12P58397 1594 aa26.54■■□□□ 1.84
PHGDH-208ENST00000641023 EIF4G3O43432 1585 aaKnown RBP26.5■■□□□ 1.83
PHGDH-208ENST00000641023 P3H3Q8IVL6 736 aa26.46■■□□□ 1.83
PHGDH-208ENST00000641023 SNAPC4Q5SXM2 1469 aa26.42■■□□□ 1.82
PHGDH-208ENST00000641023 FHOD3Q2V2M9 1422 aa26.42■■□□□ 1.82
PHGDH-208ENST00000641023 KANK4Q5T7N3 995 aaPredicted RBP26.38■■□□□ 1.81
PHGDH-208ENST00000641023 MAGI1Q96QZ7 1491 aaPredicted RBP26.38■■□□□ 1.81
PHGDH-208ENST00000641023 MAP3K1Q13233 1512 aa26.37■■□□□ 1.81
PHGDH-208ENST00000641023 SAMD9Q5K651 1589 aa26.37■■□□□ 1.81
PHGDH-208ENST00000641023 FMN1Q68DA7 1419 aa26.36■■□□□ 1.81
PHGDH-208ENST00000641023 IQGAP2Q13576 1575 aa26.33■■□□□ 1.81
PHGDH-208ENST00000641023 GRIN2AQ12879 1464 aa26.32■■□□□ 1.8
PHGDH-208ENST00000641023 TIAM1Q13009 1591 aa26.3■■□□□ 1.8
PHGDH-208ENST00000641023 CASKIN1Q8WXD9 1431 aa26.3■■□□□ 1.8
PHGDH-208ENST00000641023 PCF11O94913 1555 aaKnown RBP26.3■■□□□ 1.8
PHGDH-208ENST00000641023 FYCO1Q9BQS8 1478 aa26.3■■□□□ 1.8
PHGDH-208ENST00000641023 CHMP7Q8WUX9 453 aaPredicted RBP26.29■■□□□ 1.8
PHGDH-208ENST00000641023 SYNJ2O15056 1496 aa26.29■■□□□ 1.8
PHGDH-208ENST00000641023 ZEB1P37275 1124 aaPredicted RBP26.27■■□□□ 1.8
PHGDH-208ENST00000641023 ATP1B4Q9UN42 357 aaPredicted RBP26.27■■□□□ 1.8
PHGDH-208ENST00000641023 KIAA0586Q9BVV6 1533 aa26.27■■□□□ 1.8
PHGDH-208ENST00000641023 LRRC9Q6ZRR7 1453 aa26.21■■□□□ 1.79
PHGDH-208ENST00000641023 UGGT2Q9NYU1 1516 aa26.21■■□□□ 1.79
PHGDH-208ENST00000641023 FBLN2P98095 1184 aa26.2■■□□□ 1.78
PHGDH-208ENST00000641023 CFAP43Q8NDM7 1665 aa26.18■■□□□ 1.78
PHGDH-208ENST00000641023 HNRNPUL2Q1KMD3 747 aaKnown RBP26.14■■□□□ 1.77
PHGDH-208ENST00000641023 RRBP1Q9P2E9 1410 aaKnown RBP26.14■■□□□ 1.77
PHGDH-208ENST00000641023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.13■■□□□ 1.77
PHGDH-208ENST00000641023 CEP170Q5SW79 1584 aa26.1■■□□□ 1.77
PHGDH-208ENST00000641023 CCER1Q8TC90 406 aaPredicted RBP26.1■■□□□ 1.77
PHGDH-208ENST00000641023 NUP160Q12769 1436 aa26.1■■□□□ 1.77
PHGDH-208ENST00000641023 CCNB3Q8WWL7 1395 aa26.07■■□□□ 1.76
PHGDH-208ENST00000641023 DISP1Q96F81 1524 aa26.06■■□□□ 1.76
PHGDH-208ENST00000641023 KIAA0556O60303 1618 aa26.05■■□□□ 1.76
PHGDH-208ENST00000641023 CCDC18Q5T9S5 1454 aa26■■□□□ 1.75
PHGDH-208ENST00000641023 MTUS2Q5JR59 1369 aa26■■□□□ 1.75
PHGDH-208ENST00000641023 HECW1Q76N89 1606 aa26■■□□□ 1.75
PHGDH-208ENST00000641023 JPH4Q96JJ6 628 aa25.99■■□□□ 1.75
PHGDH-208ENST00000641023 PHLDB1Q86UU1 1377 aa25.99■■□□□ 1.75
PHGDH-208ENST00000641023 CARMIL2Q6F5E8 1435 aa25.97■■□□□ 1.75
PHGDH-208ENST00000641023 LRRIQ1Q96JM4 1722 aa25.96■■□□□ 1.75
PHGDH-208ENST00000641023 EPRSP07814 1512 aaKnown RBP25.91■■□□□ 1.74
PHGDH-208ENST00000641023 EHBP1L1Q8N3D4 1523 aa25.89■■□□□ 1.74
PHGDH-208ENST00000641023 CHD1O14646 1710 aa25.85■■□□□ 1.73
PHGDH-208ENST00000641023 SUPT6HQ7KZ85 1726 aaKnown RBP25.83■■□□□ 1.73
PHGDH-208ENST00000641023 FAM50AQ14320 339 aaKnown RBP25.83■■□□□ 1.73
PHGDH-208ENST00000641023 RAPGEF6Q8TEU7 1601 aa25.83■■□□□ 1.73
PHGDH-208ENST00000641023 NCOA2Q15596 1464 aa25.83■■□□□ 1.73
PHGDH-208ENST00000641023 ITGAEP38570 1179 aa25.83■■□□□ 1.72
PHGDH-208ENST00000641023 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.82■■□□□ 1.72
PHGDH-208ENST00000641023 CDK13Q14004 1512 aaKnown RBP25.8■■□□□ 1.72
PHGDH-208ENST00000641023 NUP153P49790 1475 aaKnown RBP25.8■■□□□ 1.72
PHGDH-208ENST00000641023 MAGI3Q5TCQ9 1506 aa25.79■■□□□ 1.72
PHGDH-208ENST00000641023 FGD6Q6ZV73 1430 aa25.78■■□□□ 1.72
PHGDH-208ENST00000641023 ARID3CA6NKF2 412 aa25.77■■□□□ 1.72
PHGDH-208ENST00000641023 CDK11AQ9UQ88 783 aaPredicted RBP25.76■■□□□ 1.71
PHGDH-208ENST00000641023 PRG4Q92954 1404 aaPredicted RBP25.76■■□□□ 1.71
PHGDH-208ENST00000641023 MYOM3Q5VTT5 1437 aa25.76■■□□□ 1.71
PHGDH-208ENST00000641023 PLB1Q6P1J6 1458 aa25.74■■□□□ 1.71
PHGDH-208ENST00000641023 ARHGEF11O15085 1522 aa25.74■■□□□ 1.71
PHGDH-208ENST00000641023 SHROOM2Q13796 1616 aa25.66■■□□□ 1.7
PHGDH-208ENST00000641023 PTPRGP23470 1445 aa25.66■■□□□ 1.7
PHGDH-208ENST00000641023 ABCA8O94911 1581 aa25.65■■□□□ 1.7
PHGDH-208ENST00000641023 CLSPNQ9HAW4 1339 aa25.63■■□□□ 1.69
PHGDH-208ENST00000641023 SETD5Q9C0A6 1442 aa25.63■■□□□ 1.69
PHGDH-208ENST00000641023 DHX57Q6P158 1386 aaKnown RBP25.61■■□□□ 1.69
PHGDH-208ENST00000641023 MIA2Q96PC5 1412 aa25.61■■□□□ 1.69
PHGDH-208ENST00000641023 RAB3GAP2Q9H2M9 1393 aa25.61■■□□□ 1.69
PHGDH-208ENST00000641023 PTPN23Q9H3S7 1636 aa25.6■■□□□ 1.69
PHGDH-208ENST00000641023 TROQ12816 1431 aaPredicted RBP25.59■■□□□ 1.69
PHGDH-208ENST00000641023 TCOF1Q13428 1488 aaKnown RBP25.56■■□□□ 1.68
PHGDH-208ENST00000641023 CLASP1Q7Z460 1538 aa25.56■■□□□ 1.68
PHGDH-208ENST00000641023 PLEKHD1A6NEE1 506 aa25.54■■□□□ 1.68
PHGDH-208ENST00000641023 ATP10BO94823 1461 aa25.53■■□□□ 1.68
PHGDH-208ENST00000641023 UACAQ9BZF9 1416 aa25.5■■□□□ 1.67
PHGDH-208ENST00000641023 PTPRKQ15262 1439 aa25.48■■□□□ 1.67
PHGDH-208ENST00000641023 ADCY10Q96PN6 1610 aa25.47■■□□□ 1.67
PHGDH-208ENST00000641023 ERCC6L2Q5T890 1561 aa25.46■■□□□ 1.67
PHGDH-208ENST00000641023 HFM1A2PYH4 1435 aa25.45■■□□□ 1.66
PHGDH-208ENST00000641023 KIF14Q15058 1648 aa25.4■■□□□ 1.66
PHGDH-208ENST00000641023 CFDP1Q9UEE9 299 aaPredicted RBP25.4■■□□□ 1.66
PHGDH-208ENST00000641023 ITSN2Q9NZM3 1697 aa25.39■■□□□ 1.66
PHGDH-208ENST00000641023 GPATCH8Q9UKJ3 1502 aaKnown RBP25.39■■□□□ 1.65
PHGDH-208ENST00000641023 ABCC2Q92887 1545 aa25.38■■□□□ 1.65
PHGDH-208ENST00000641023 NAIPQ13075 1403 aa25.37■■□□□ 1.65
PHGDH-208ENST00000641023 CHIC2Q9UKJ5 165 aa25.34■■□□□ 1.65
PHGDH-208ENST00000641023 AKNAQ7Z591 1439 aa25.34■■□□□ 1.65
PHGDH-208ENST00000641023 ZNF644Q9H582 1327 aaPredicted RBP25.33■■□□□ 1.65
PHGDH-208ENST00000641023 ABCC10Q5T3U5 1492 aa25.32■■□□□ 1.64
PHGDH-208ENST00000641023 DAPK1P53355 1430 aa25.32■■□□□ 1.64
PHGDH-208ENST00000641023 OSCARQ8IYS5 282 aa25.32■■□□□ 1.64
PHGDH-208ENST00000641023 UHRF1BP1LA0JNW5 1464 aa25.3■■□□□ 1.64
PHGDH-208ENST00000641023 RRP7BPQ9NSQ0 103 aa25.3■■□□□ 1.64
PHGDH-208ENST00000641023 DNMT1P26358 1616 aaKnown RBP25.3■■□□□ 1.64
PHGDH-208ENST00000641023 MAPKBP1O60336 1514 aa25.3■■□□□ 1.64
PHGDH-208ENST00000641023 CAMSAP2Q08AD1 1489 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms