RNA–Protein interactions for RNA: ENST00000639791.1

SPIN3-227, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,827 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-227ENST00000639791 MYT1Q01538 1121 aa9.19□□□□□ -0.94
SPIN3-227ENST00000639791 CHGAP10645 457 aaKnown RBP9.18□□□□□ -0.94
SPIN3-227ENST00000639791 BRPF1P55201 1214 aaPredicted RBP9.18□□□□□ -0.94
SPIN3-227ENST00000639791 TRHP20396 242 aaPredicted RBP9.16□□□□□ -0.94
SPIN3-227ENST00000639791 CECR2Q9BXF3 1484 aa9.15□□□□□ -0.94
SPIN3-227ENST00000639791 SPOCK2Q92563 424 aa9.13□□□□□ -0.95
SPIN3-227ENST00000639791 MROH2BQ7Z745 1585 aa9.13□□□□□ -0.95
SPIN3-227ENST00000639791 TTBK1Q5TCY1 1321 aaPredicted RBP9.12□□□□□ -0.95
SPIN3-227ENST00000639791 DCAF8L1A6NGE4 600 aa9.11□□□□□ -0.95
SPIN3-227ENST00000639791 WRNQ14191 1432 aaPredicted RBP eCLIP9.09□□□□□ -0.95
SPIN3-227ENST00000639791 MSH5O43196 834 aa9.08□□□□□ -0.96
SPIN3-227ENST00000639791 MKRN4PQ13434 485 aaPredicted RBP9.08□□□□□ -0.96
SPIN3-227ENST00000639791 WIZO95785 1651 aa9.07□□□□□ -0.96
SPIN3-227ENST00000639791 ZNF316A6NFI3 1004 aaPredicted RBP9.07□□□□□ -0.96
SPIN3-227ENST00000639791 DMRT2Q9Y5R5 561 aa9.07□□□□□ -0.96
SPIN3-227ENST00000639791 CEP162Q5TB80 1403 aa9.06□□□□□ -0.96
SPIN3-227ENST00000639791 YTHDC1Q96MU7 727 aaKnown RBP9.05□□□□□ -0.96
SPIN3-227ENST00000639791 BAZ1AQ9NRL2 1556 aaPredicted RBP9.04□□□□□ -0.96
SPIN3-227ENST00000639791 ZNF219Q9P2Y4 722 aaPredicted RBP9.03□□□□□ -0.96
SPIN3-227ENST00000639791 NACADO15069 1562 aa9.03□□□□□ -0.96
SPIN3-227ENST00000639791 EIF4G1Q04637 1599 aaKnown RBP9.03□□□□□ -0.96
SPIN3-227ENST00000639791 ARID3AQ99856 593 aa9.01□□□□□ -0.97
SPIN3-227ENST00000639791 CCDC88BA6NC98 1476 aa9.01□□□□□ -0.97
SPIN3-227ENST00000639791 NEUROD2Q15784 382 aa9.01□□□□□ -0.97
SPIN3-227ENST00000639791 LMOD2Q6P5Q4 547 aa9.01□□□□□ -0.97
SPIN3-227ENST00000639791 TNIKQ9UKE5 1360 aa9.01□□□□□ -0.97
SPIN3-227ENST00000639791 SAMD1Q6SPF0 538 aaPredicted RBP8.99□□□□□ -0.97
SPIN3-227ENST00000639791 ABCC8Q09428 1581 aa8.99□□□□□ -0.97
SPIN3-227ENST00000639791 SOGA1O94964 1423 aa8.98□□□□□ -0.97
SPIN3-227ENST00000639791 HS6ST3Q8IZP7 471 aa8.98□□□□□ -0.97
SPIN3-227ENST00000639791 MIER1Q8N108 512 aa8.98□□□□□ -0.97
SPIN3-227ENST00000639791 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.97□□□□□ -0.97
SPIN3-227ENST00000639791 NKX1-1Q15270 411 aaPredicted RBP8.96□□□□□ -0.97
SPIN3-227ENST00000639791 EEA1Q15075 1411 aa8.95□□□□□ -0.98
SPIN3-227ENST00000639791 C1orf115Q9H7X2 142 aa8.95□□□□□ -0.98
SPIN3-227ENST00000639791 HNRNPUL2Q1KMD3 747 aaKnown RBP8.94□□□□□ -0.98
SPIN3-227ENST00000639791 ZMYND15Q9H091 742 aa8.94□□□□□ -0.98
SPIN3-227ENST00000639791 TOP2AP11388 1531 aaKnown RBP8.94□□□□□ -0.98
SPIN3-227ENST00000639791 CCDC9Q9Y3X0 531 aaKnown RBP8.94□□□□□ -0.98
SPIN3-227ENST00000639791 RSPH6AQ9H0K4 717 aa8.92□□□□□ -0.98
SPIN3-227ENST00000639791 GOLGA3Q08378 1498 aa8.92□□□□□ -0.98
SPIN3-227ENST00000639791 GTPBP6O43824 516 aaPredicted RBP8.91□□□□□ -0.98
SPIN3-227ENST00000639791 U3KPZ7 1027 aaPredicted RBP8.91□□□□□ -0.98
SPIN3-227ENST00000639791 RUSC2Q8N2Y8 1516 aa8.91□□□□□ -0.98
SPIN3-227ENST00000639791 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.9□□□□□ -0.98
SPIN3-227ENST00000639791 SMARCA2P51531 1590 aa8.89□□□□□ -0.99
SPIN3-227ENST00000639791 NECTIN2Q92692 538 aa8.89□□□□□ -0.99
SPIN3-227ENST00000639791 SLC24A3Q9HC58 644 aa8.88□□□□□ -0.99
SPIN3-227ENST00000639791 CIZ1Q9ULV3 898 aaPredicted RBP8.87□□□□□ -0.99
SPIN3-227ENST00000639791 SMARCA4P51532 1647 aa8.86□□□□□ -0.99
SPIN3-227ENST00000639791 ZBTB7CA1YPR0 619 aa8.86□□□□□ -0.99
SPIN3-227ENST00000639791 RNF25Q96BH1 459 aaPredicted RBP8.85□□□□□ -0.99
SPIN3-227ENST00000639791 CLIP1P30622 1438 aa8.84□□□□□ -0.99
SPIN3-227ENST00000639791 P3H3Q8IVL6 736 aa8.84□□□□□ -0.99
SPIN3-227ENST00000639791 ZC3H15Q8WU90 426 aaKnown RBP8.84□□□□□ -0.99
SPIN3-227ENST00000639791 KCNV2Q8TDN2 545 aa8.84□□□□□ -0.99
SPIN3-227ENST00000639791 CEP164Q9UPV0 1460 aa8.84□□□□□ -0.99
SPIN3-227ENST00000639791 CLSPNQ9HAW4 1339 aa8.83□□□□□ -1
SPIN3-227ENST00000639791 ARID3CA6NKF2 412 aa8.83□□□□□ -1
SPIN3-227ENST00000639791 VPS8Q8N3P4 1428 aa8.82□□□□□ -1
SPIN3-227ENST00000639791 PDIA4P13667 645 aaKnown RBP8.81□□□□□ -1
SPIN3-227ENST00000639791 SUPT16HQ9Y5B9 1047 aaKnown RBP8.8□□□□□ -1
SPIN3-227ENST00000639791 PLCD3Q8N3E9 789 aa8.8□□□□□ -1
SPIN3-227ENST00000639791 IGSF3O75054 1194 aa8.79□□□□□ -1
SPIN3-227ENST00000639791 KIF21BO75037 1637 aa8.79□□□□□ -1
SPIN3-227ENST00000639791 BAZ1BQ9UIG0 1483 aaKnown RBP8.75□□□□□ -1.01
SPIN3-227ENST00000639791 DHX57Q6P158 1386 aaKnown RBP8.75□□□□□ -1.01
SPIN3-227ENST00000639791 EIF5BO60841 1220 aaKnown RBP8.75□□□□□ -1.01
SPIN3-227ENST00000639791 SYNJ1O43426 1573 aa8.74□□□□□ -1.01
SPIN3-227ENST00000639791 RAPGEF2Q9Y4G8 1499 aa8.74□□□□□ -1.01
SPIN3-227ENST00000639791 APBB1O00213 710 aa8.74□□□□□ -1.01
SPIN3-227ENST00000639791 GPBP1L1Q9HC44 474 aaPredicted RBP8.71□□□□□ -1.02
SPIN3-227ENST00000639791 ANP32EQ9BTT0 268 aa8.69□□□□□ -1.02
SPIN3-227ENST00000639791 KCTD17Q8N5Z5 321 aa8.68□□□□□ -1.02
SPIN3-227ENST00000639791 IL27Q8NEV9 243 aa8.68□□□□□ -1.02
SPIN3-227ENST00000639791 SPINK5Q9NQ38 1064 aaPredicted RBP8.67□□□□□ -1.02
SPIN3-227ENST00000639791 MKRN3Q13064 507 aaKnown RBP8.67□□□□□ -1.02
SPIN3-227ENST00000639791 KANK4Q5T7N3 995 aaPredicted RBP8.67□□□□□ -1.02
SPIN3-227ENST00000639791 PABPN1Q86U42 306 aaKnown RBP eCLIP8.67□□□□□ -1.02
SPIN3-227ENST00000639791 STK25O00506 426 aa8.66□□□□□ -1.02
SPIN3-227ENST00000639791 STAG3Q9UJ98 1225 aa8.66□□□□□ -1.02
SPIN3-227ENST00000639791 ZMYND10O75800 440 aa8.65□□□□□ -1.03
SPIN3-227ENST00000639791 CADPS2Q86UW7 1296 aa8.65□□□□□ -1.03
SPIN3-227ENST00000639791 PEG3Q9GZU2 1588 aa8.64□□□□□ -1.03
SPIN3-227ENST00000639791 ARAP1Q96P48 1450 aa8.64□□□□□ -1.03
SPIN3-227ENST00000639791 RAD21O60216 631 aa8.64□□□□□ -1.03
SPIN3-227ENST00000639791 RRBP1Q9P2E9 1410 aaKnown RBP8.63□□□□□ -1.03
SPIN3-227ENST00000639791 UNC13AQ9UPW8 1703 aa8.63□□□□□ -1.03
SPIN3-227ENST00000639791 CCDC82Q8N4S0 544 aa8.63□□□□□ -1.03
SPIN3-227ENST00000639791 KCNH8Q96L42 1107 aa8.63□□□□□ -1.03
SPIN3-227ENST00000639791 ITGAEP38570 1179 aa8.62□□□□□ -1.03
SPIN3-227ENST00000639791 CCNB3Q8WWL7 1395 aa8.62□□□□□ -1.03
SPIN3-227ENST00000639791 RGS22Q8NE09 1264 aa8.62□□□□□ -1.03
SPIN3-227ENST00000639791 CUX2O14529 1486 aa8.61□□□□□ -1.03
SPIN3-227ENST00000639791 POLA2Q14181 598 aa8.61□□□□□ -1.03
SPIN3-227ENST00000639791 ZNF428Q96B54 188 aa8.61□□□□□ -1.03
SPIN3-227ENST00000639791 WDR70Q9NW82 654 aa8.61□□□□□ -1.03
SPIN3-227ENST00000639791 ERICH3Q5RHP9 1530 aa8.61□□□□□ -1.03
SPIN3-227ENST00000639791 RIOK3O14730 519 aaKnown RBP8.61□□□□□ -1.03
SPIN3-227ENST00000639791 SEMA3EO15041 775 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms