RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 PRKAR2AP13861 404 aaKnown RBP2.23□□□□□ -2.05
CCDC7-215ENST00000639629 KIF12Q96FN5 646 aa2.22□□□□□ -2.05
CCDC7-215ENST00000639629 TIE1P35590 1138 aa2.21□□□□□ -2.05
CCDC7-215ENST00000639629 KDM4FA0A1W2PPD8 638 aa2.2□□□□□ -2.06
CCDC7-215ENST00000639629 IRX5P78411 483 aaPredicted RBP2.2□□□□□ -2.06
CCDC7-215ENST00000639629 ZNF692Q9BU19 519 aaPredicted RBP2.2□□□□□ -2.06
CCDC7-215ENST00000639629 C7P10643 843 aa2.19□□□□□ -2.06
CCDC7-215ENST00000639629 PABPN1Q86U42 306 aaKnown RBP eCLIP2.18□□□□□ -2.06
CCDC7-215ENST00000639629 SLC39A7Q92504 469 aa2.17□□□□□ -2.06
CCDC7-215ENST00000639629 IGSF5Q9NSI5 407 aa2.17□□□□□ -2.06
CCDC7-215ENST00000639629 IFFO2Q5TF58 517 aa2.17□□□□□ -2.06
CCDC7-215ENST00000639629 SPDYE4A6NLX3 237 aa2.16□□□□□ -2.06
CCDC7-215ENST00000639629 POTEMA6NI47 508 aa2.16□□□□□ -2.06
CCDC7-215ENST00000639629 GALR2O43603 387 aaPredicted RBP2.15□□□□□ -2.06
CCDC7-215ENST00000639629 PRR29P0C7W0 189 aa2.15□□□□□ -2.07
CCDC7-215ENST00000639629 CD44P16070 742 aaKnown RBP2.15□□□□□ -2.07
CCDC7-215ENST00000639629 BMP2KQ9NSY1 1161 aaPredicted RBP2.15□□□□□ -2.07
CCDC7-215ENST00000639629 KIF3CO14782 793 aa2.14□□□□□ -2.07
CCDC7-215ENST00000639629 NPM1P06748 294 aaKnown RBP eCLIP2.13□□□□□ -2.07
CCDC7-215ENST00000639629 PDCD7Q8N8D1 485 aaKnown RBP2.13□□□□□ -2.07
CCDC7-215ENST00000639629 TRPC6Q9Y210 931 aa2.13□□□□□ -2.07
CCDC7-215ENST00000639629 POTEB3A0JP26 581 aa2.12□□□□□ -2.07
CCDC7-215ENST00000639629 POTEBQ6S5H4 581 aa2.12□□□□□ -2.07
CCDC7-215ENST00000639629 POTEGQ6S5H5 508 aa2.12□□□□□ -2.07
CCDC7-215ENST00000639629 MAMSTRQ6ZN01 415 aa2.12□□□□□ -2.07
CCDC7-215ENST00000639629 ATN1P54259 1190 aaPredicted RBP2.12□□□□□ -2.07
CCDC7-215ENST00000639629 CHADLQ6NUI6 762 aa2.12□□□□□ -2.07
CCDC7-215ENST00000639629 RGS20O76081 388 aa2.11□□□□□ -2.07
CCDC7-215ENST00000639629 TTLL13PA6NNM8 815 aa2.11□□□□□ -2.07
CCDC7-215ENST00000639629 SLC34A2O95436 690 aa2.11□□□□□ -2.07
CCDC7-215ENST00000639629 HAX1O00165 279 aa2.1□□□□□ -2.07
CCDC7-215ENST00000639629 RASEFQ8IZ41 740 aa2.1□□□□□ -2.07
CCDC7-215ENST00000639629 ZSWIM6Q9HCJ5 1215 aa2.09□□□□□ -2.07
CCDC7-215ENST00000639629 HOXB3P14651 431 aaPredicted RBP2.09□□□□□ -2.07
CCDC7-215ENST00000639629 MS4A3Q96HJ5 214 aa2.09□□□□□ -2.07
CCDC7-215ENST00000639629 TRIM41Q8WV44 630 aa2.08□□□□□ -2.08
CCDC7-215ENST00000639629 COLQQ9Y215 455 aaPredicted RBP2.08□□□□□ -2.08
CCDC7-215ENST00000639629 KRTAP9-8Q9BYQ0 159 aa2.08□□□□□ -2.08
CCDC7-215ENST00000639629 FBXO22Q8NEZ5 403 aa2.07□□□□□ -2.08
CCDC7-215ENST00000639629 ZRANB1Q9UGI0 708 aa2.07□□□□□ -2.08
CCDC7-215ENST00000639629 KRTAP3-3Q9BYR6 98 aa2.06□□□□□ -2.08
CCDC7-215ENST00000639629 KRTAP3-2Q9BYR7 98 aa2.06□□□□□ -2.08
CCDC7-215ENST00000639629 PHF12Q96QT6 1004 aa2.06□□□□□ -2.08
CCDC7-215ENST00000639629 MAP3K13O43283 966 aa2.06□□□□□ -2.08
CCDC7-215ENST00000639629 SLC4A5Q9BY07 1137 aa2.06□□□□□ -2.08
CCDC7-215ENST00000639629 ARIH1Q9Y4X5 557 aaPredicted RBP2.06□□□□□ -2.08
CCDC7-215ENST00000639629 IFNL1Q8IU54 200 aa2.05□□□□□ -2.08
CCDC7-215ENST00000639629 ZBTB47Q9UFB7 747 aaPredicted RBP2.05□□□□□ -2.08
CCDC7-215ENST00000639629 METRNQ9UJH8 293 aa2.05□□□□□ -2.08
CCDC7-215ENST00000639629 KRTAP5-3Q6L8H2 238 aa2.04□□□□□ -2.08
CCDC7-215ENST00000639629 OCEL1Q9H607 264 aa2.04□□□□□ -2.08
CCDC7-215ENST00000639629 MS4A4AQ96JQ5 239 aa2.03□□□□□ -2.08
CCDC7-215ENST00000639629 HOXB1P14653 301 aaPredicted RBP2.03□□□□□ -2.08
CCDC7-215ENST00000639629 SOX12O15370 315 aa2.02□□□□□ -2.09
CCDC7-215ENST00000639629 IFNLR1Q8IU57 520 aaPredicted RBP2.02□□□□□ -2.09
CCDC7-215ENST00000639629 GSE1Q14687 1217 aa2.02□□□□□ -2.09
CCDC7-215ENST00000639629 GPR153Q6NV75 609 aa2.02□□□□□ -2.09
CCDC7-215ENST00000639629 ANO8Q9HCE9 1232 aaPredicted RBP2.02□□□□□ -2.09
CCDC7-215ENST00000639629 ST18O60284 1047 aa2.01□□□□□ -2.09
CCDC7-215ENST00000639629 FBXO3Q9UK99 471 aa2.01□□□□□ -2.09
CCDC7-215ENST00000639629 PTGER2P43116 358 aa2.01□□□□□ -2.09
CCDC7-215ENST00000639629 ONECUT3O60422 494 aaPredicted RBP2□□□□□ -2.09
CCDC7-215ENST00000639629 SPNS2Q8IVW8 549 aa2□□□□□ -2.09
CCDC7-215ENST00000639629 MMRN1Q13201 1228 aa2□□□□□ -2.09
CCDC7-215ENST00000639629 POTEEQ6S8J3 1075 aa2□□□□□ -2.09
CCDC7-215ENST00000639629 TMEM92Q6UXU6 159 aa1.99□□□□□ -2.09
CCDC7-215ENST00000639629 MFSD10Q14728 455 aa1.99□□□□□ -2.09
CCDC7-215ENST00000639629 RNF25Q96BH1 459 aaPredicted RBP1.99□□□□□ -2.09
CCDC7-215ENST00000639629 HMCN1Q96RW7 5635 aa1.99□□□□□ -2.09
CCDC7-215ENST00000639629 BHMG1C9JSJ3 638 aaPredicted RBP1.99□□□□□ -2.09
CCDC7-215ENST00000639629 HRO43593 1189 aa1.99□□□□□ -2.09
CCDC7-215ENST00000639629 ZNF467Q7Z7K2 595 aaPredicted RBP1.99□□□□□ -2.09
CCDC7-215ENST00000639629 VASPP50552 380 aaPredicted RBP1.98□□□□□ -2.09
CCDC7-215ENST00000639629 PTCD2Q8WV60 388 aaKnown RBP1.98□□□□□ -2.09
CCDC7-215ENST00000639629 ZNF687Q8N1G0 1237 aa1.98□□□□□ -2.09
CCDC7-215ENST00000639629 CLEC11AQ9Y240 323 aa1.97□□□□□ -2.09
CCDC7-215ENST00000639629 CAMK2BQ13554 666 aa1.97□□□□□ -2.09
CCDC7-215ENST00000639629 DCBLD2Q96PD2 775 aa1.97□□□□□ -2.09
CCDC7-215ENST00000639629 TSPYL2Q9H2G4 693 aaPredicted RBP1.97□□□□□ -2.09
CCDC7-215ENST00000639629 L3MBTL3Q96JM7 780 aaPredicted RBP1.97□□□□□ -2.09
CCDC7-215ENST00000639629 TRIM35Q9UPQ4 493 aa1.97□□□□□ -2.09
CCDC7-215ENST00000639629 TK2O00142 265 aa1.96□□□□□ -2.1
CCDC7-215ENST00000639629 SNPHO15079 494 aa1.96□□□□□ -2.1
CCDC7-215ENST00000639629 PAK3O75914 559 aaPredicted RBP1.96□□□□□ -2.1
CCDC7-215ENST00000639629 PDAP1Q13442 181 aaKnown RBP1.95□□□□□ -2.1
CCDC7-215ENST00000639629 CDAN1Q8IWY9 1227 aa1.95□□□□□ -2.1
CCDC7-215ENST00000639629 PKD2Q13563 968 aa1.95□□□□□ -2.1
CCDC7-215ENST00000639629 SCUBE2Q9NQ36 999 aa1.94□□□□□ -2.1
CCDC7-215ENST00000639629 SPOCK2Q92563 424 aa1.94□□□□□ -2.1
CCDC7-215ENST00000639629 MFRPQ9BY79 579 aa1.94□□□□□ -2.1
CCDC7-215ENST00000639629 PBX2P40425 430 aa1.94□□□□□ -2.1
CCDC7-215ENST00000639629 FAM212AQ96EL1 285 aa1.94□□□□□ -2.1
CCDC7-215ENST00000639629 TTC13Q8NBP0 860 aa1.93□□□□□ -2.1
CCDC7-215ENST00000639629 CRISPLD2Q9H0B8 497 aa1.93□□□□□ -2.1
CCDC7-215ENST00000639629 PSEN1P49768 467 aa1.93□□□□□ -2.1
CCDC7-215ENST00000639629 PCDHB13Q9Y5F0 798 aa1.93□□□□□ -2.1
CCDC7-215ENST00000639629 FOXK1P85037 733 aa1.92□□□□□ -2.1
CCDC7-215ENST00000639629 TMEM106CQ9BVX2 250 aa1.92□□□□□ -2.1
CCDC7-215ENST00000639629 BOLA1Q9Y3E2 137 aa1.92□□□□□ -2.1
CCDC7-215ENST00000639629 LCE2BO14633 110 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms