RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 FHAD1B1AJZ9 1412 aa20.34■□□□□ 0.85
PTP4A1-207ENST00000639568 MAPKBP1O60336 1514 aa20.32■□□□□ 0.84
PTP4A1-207ENST00000639568 ADAMTS12P58397 1594 aa20.31■□□□□ 0.84
PTP4A1-207ENST00000639568 DIP2BQ9P265 1576 aa20.29■□□□□ 0.84
PTP4A1-207ENST00000639568 WRNQ14191 1432 aaPredicted RBP eCLIP20.27■□□□□ 0.84
PTP4A1-207ENST00000639568 ADGRL1O94910 1474 aa20.23■□□□□ 0.83
PTP4A1-207ENST00000639568 HECW2Q9P2P5 1572 aa20.17■□□□□ 0.82
PTP4A1-207ENST00000639568 FBXO41Q8TF61 875 aa20.16■□□□□ 0.82
PTP4A1-207ENST00000639568 ERICH3Q5RHP9 1530 aa20.15■□□□□ 0.82
PTP4A1-207ENST00000639568 ADCY10Q96PN6 1610 aa20.15■□□□□ 0.82
PTP4A1-207ENST00000639568 TSPOAP1O95153 1857 aa20.15■□□□□ 0.82
PTP4A1-207ENST00000639568 RUSC2Q8N2Y8 1516 aa20.04■□□□□ 0.8
PTP4A1-207ENST00000639568 TTBK1Q5TCY1 1321 aaPredicted RBP20.03■□□□□ 0.8
PTP4A1-207ENST00000639568 PTPRGP23470 1445 aa20.01■□□□□ 0.79
PTP4A1-207ENST00000639568 ASXL2Q76L83 1435 aa19.98■□□□□ 0.79
PTP4A1-207ENST00000639568 PLB1Q6P1J6 1458 aa19.98■□□□□ 0.79
PTP4A1-207ENST00000639568 TOP2BQ02880 1626 aa19.97■□□□□ 0.79
PTP4A1-207ENST00000639568 KIAA0586Q9BVV6 1533 aa19.96■□□□□ 0.79
PTP4A1-207ENST00000639568 COL17A1Q9UMD9 1497 aaPredicted RBP19.94■□□□□ 0.78
PTP4A1-207ENST00000639568 ABCC2Q92887 1545 aa19.93■□□□□ 0.78
PTP4A1-207ENST00000639568 GLI2P10070 1586 aa19.92■□□□□ 0.78
PTP4A1-207ENST00000639568 BIVM-ERCC5R4GMW8 1640 aa19.91■□□□□ 0.78
PTP4A1-207ENST00000639568 TEX14Q8IWB6 1497 aa19.9■□□□□ 0.78
PTP4A1-207ENST00000639568 PPRC1Q5VV67 1664 aaKnown RBP19.87■□□□□ 0.77
PTP4A1-207ENST00000639568 TNIKQ9UKE5 1360 aa19.87■□□□□ 0.77
PTP4A1-207ENST00000639568 CARMIL2Q6F5E8 1435 aa19.86■□□□□ 0.77
PTP4A1-207ENST00000639568 LMTK3Q96Q04 1460 aa19.86■□□□□ 0.77
PTP4A1-207ENST00000639568 EPRSP07814 1512 aaKnown RBP19.81■□□□□ 0.76
PTP4A1-207ENST00000639568 UHRF1BP1LA0JNW5 1464 aa19.79■□□□□ 0.76
PTP4A1-207ENST00000639568 UACAQ9BZF9 1416 aa19.78■□□□□ 0.76
PTP4A1-207ENST00000639568 IGF1RP08069 1367 aa19.77■□□□□ 0.76
PTP4A1-207ENST00000639568 MAP3K4Q9Y6R4 1608 aa19.75■□□□□ 0.75
PTP4A1-207ENST00000639568 CUL7Q14999 1698 aa19.72■□□□□ 0.75
PTP4A1-207ENST00000639568 SUPT5HO00267 1087 aaKnown RBP19.72■□□□□ 0.75
PTP4A1-207ENST00000639568 SOCS7O14512 581 aa19.69■□□□□ 0.74
PTP4A1-207ENST00000639568 KDM5BQ9UGL1 1544 aa19.69■□□□□ 0.74
PTP4A1-207ENST00000639568 KIF27Q86VH2 1401 aa19.68■□□□□ 0.74
PTP4A1-207ENST00000639568 CD109Q6YHK3 1445 aa19.65■□□□□ 0.74
PTP4A1-207ENST00000639568 CARMIL1Q5VZK9 1371 aa19.63■□□□□ 0.73
PTP4A1-207ENST00000639568 DISP3Q9P2K9 1392 aa19.63■□□□□ 0.73
PTP4A1-207ENST00000639568 KCNH8Q96L42 1107 aa19.63■□□□□ 0.73
PTP4A1-207ENST00000639568 PTPRMP28827 1452 aa19.62■□□□□ 0.73
PTP4A1-207ENST00000639568 WDR7Q9Y4E6 1490 aa19.62■□□□□ 0.73
PTP4A1-207ENST00000639568 ILDR2Q71H61 639 aa19.61■□□□□ 0.73
PTP4A1-207ENST00000639568 MAGI3Q5TCQ9 1506 aa19.6■□□□□ 0.73
PTP4A1-207ENST00000639568 IQGAP2Q13576 1575 aa19.59■□□□□ 0.73
PTP4A1-207ENST00000639568 ZCCHC11Q5TAX3 1644 aaKnown RBP19.58■□□□□ 0.73
PTP4A1-207ENST00000639568 KIF21BO75037 1637 aa19.58■□□□□ 0.72
PTP4A1-207ENST00000639568 DISP1Q96F81 1524 aa19.56■□□□□ 0.72
PTP4A1-207ENST00000639568 CERKQ8TCT0 537 aa19.56■□□□□ 0.72
PTP4A1-207ENST00000639568 ARID4BQ4LE39 1312 aaPredicted RBP19.53■□□□□ 0.72
PTP4A1-207ENST00000639568 PCF11O94913 1555 aaKnown RBP19.53■□□□□ 0.72
PTP4A1-207ENST00000639568 HSPA2P54652 639 aa19.48■□□□□ 0.71
PTP4A1-207ENST00000639568 ARAP3Q8WWN8 1544 aa19.47■□□□□ 0.71
PTP4A1-207ENST00000639568 CFAP43Q8NDM7 1665 aa19.47■□□□□ 0.71
PTP4A1-207ENST00000639568 ADAMTSL3P82987 1691 aa19.46■□□□□ 0.71
PTP4A1-207ENST00000639568 UGGT2Q9NYU1 1516 aa19.44■□□□□ 0.7
PTP4A1-207ENST00000639568 RAPGEF3O95398 923 aa19.43■□□□□ 0.7
PTP4A1-207ENST00000639568 PLPPR3Q6T4P5 718 aa19.42■□□□□ 0.7
PTP4A1-207ENST00000639568 PHLDB1Q86UU1 1377 aa19.42■□□□□ 0.7
PTP4A1-207ENST00000639568 KIAA0556O60303 1618 aa19.4■□□□□ 0.7
PTP4A1-207ENST00000639568 FAM9AQ8IZU1 332 aaPredicted RBP19.37■□□□□ 0.69
PTP4A1-207ENST00000639568 MADDQ8WXG6 1647 aa19.36■□□□□ 0.69
PTP4A1-207ENST00000639568 BCORL1Q5H9F3 1711 aa19.33■□□□□ 0.68
PTP4A1-207ENST00000639568 RAPGEF2Q9Y4G8 1499 aa19.33■□□□□ 0.68
PTP4A1-207ENST00000639568 ARID3CA6NKF2 412 aa19.32■□□□□ 0.68
PTP4A1-207ENST00000639568 GOLGA3Q08378 1498 aa19.29■□□□□ 0.68
PTP4A1-207ENST00000639568 ABCA8O94911 1581 aa19.28■□□□□ 0.68
PTP4A1-207ENST00000639568 DMRT2Q9Y5R5 561 aa19.27■□□□□ 0.68
PTP4A1-207ENST00000639568 SPATA31D1Q6ZQQ2 1576 aa19.27■□□□□ 0.67
PTP4A1-207ENST00000639568 POGZQ7Z3K3 1410 aa19.26■□□□□ 0.67
PTP4A1-207ENST00000639568 NEO1Q92859 1461 aa19.26■□□□□ 0.67
PTP4A1-207ENST00000639568 RIMS1Q86UR5 1692 aaKnown RBP19.25■□□□□ 0.67
PTP4A1-207ENST00000639568 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.2■□□□□ 0.66
PTP4A1-207ENST00000639568 MLECQ14165 292 aa19.2■□□□□ 0.66
PTP4A1-207ENST00000639568 HNRNPUL2Q1KMD3 747 aaKnown RBP19.2■□□□□ 0.66
PTP4A1-207ENST00000639568 ATP10BO94823 1461 aa19.19■□□□□ 0.66
PTP4A1-207ENST00000639568 ABCA9Q8IUA7 1624 aa19.18■□□□□ 0.66
PTP4A1-207ENST00000639568 FANCAO15360 1455 aa19.18■□□□□ 0.66
PTP4A1-207ENST00000639568 YEATS2Q9ULM3 1422 aa19.17■□□□□ 0.66
PTP4A1-207ENST00000639568 AKNAQ7Z591 1439 aa19.17■□□□□ 0.66
PTP4A1-207ENST00000639568 DENND4BO75064 1496 aaPredicted RBP19.16■□□□□ 0.66
PTP4A1-207ENST00000639568 ARHGEF40Q8TER5 1519 aa19.15■□□□□ 0.66
PTP4A1-207ENST00000639568 FRMPD1Q5SYB0 1578 aa19.15■□□□□ 0.66
PTP4A1-207ENST00000639568 P3H3Q8IVL6 736 aa19.13■□□□□ 0.65
PTP4A1-207ENST00000639568 FHOD3Q2V2M9 1422 aa19.08■□□□□ 0.65
PTP4A1-207ENST00000639568 CEBPAP49715 358 aaPredicted RBP19.06■□□□□ 0.64
PTP4A1-207ENST00000639568 ZFYVE16Q7Z3T8 1539 aa19.05■□□□□ 0.64
PTP4A1-207ENST00000639568 CTTNBP2Q8WZ74 1663 aa19.05■□□□□ 0.64
PTP4A1-207ENST00000639568 EFCAB5A4FU69 1503 aa19.03■□□□□ 0.64
PTP4A1-207ENST00000639568 TTC37Q6PGP7 1564 aa19.02■□□□□ 0.64
PTP4A1-207ENST00000639568 UHRF1BP1Q6BDS2 1440 aa19.02■□□□□ 0.64
PTP4A1-207ENST00000639568 PLEKHD1A6NEE1 506 aa19.02■□□□□ 0.64
PTP4A1-207ENST00000639568 MAGI2Q86UL8 1455 aa19.02■□□□□ 0.63
PTP4A1-207ENST00000639568 PTPRTO14522 1441 aa19■□□□□ 0.63
PTP4A1-207ENST00000639568 PREX1Q8TCU6 1659 aa18.99■□□□□ 0.63
PTP4A1-207ENST00000639568 RICTORQ6R327 1708 aa18.99■□□□□ 0.63
PTP4A1-207ENST00000639568 ZMYM4Q5VZL5 1548 aa18.98■□□□□ 0.63
PTP4A1-207ENST00000639568 FER1L4A9Z1Z3 1794 aa18.98■□□□□ 0.63
PTP4A1-207ENST00000639568 IQSEC2Q5JU85 1478 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms