RNA–Protein interactions for RNA: ENST00000638952.1

HNRNPU-217, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-217ENST00000638952 EIF4G2P78344 907 aaKnown RBP eCLIP22.84■■□□□ 1.252e-12■■■■□ 22
HNRNPU-217ENST00000638952 RTN4Q9NQC3 1192 aaKnown RBP22.83■■□□□ 1.25
HNRNPU-217ENST00000638952 RRP7BPQ9NSQ0 103 aa22.82■■□□□ 1.24
HNRNPU-217ENST00000638952 NAP1L5Q96NT1 182 aaPredicted RBP22.81■■□□□ 1.24
HNRNPU-217ENST00000638952 DDRGK1Q96HY6 314 aa22.8■■□□□ 1.24
HNRNPU-217ENST00000638952 CDK11BP21127 795 aaKnown RBP22.8■■□□□ 1.24
HNRNPU-217ENST00000638952 ERICH6BQ5W0A0 696 aa22.79■■□□□ 1.24
HNRNPU-217ENST00000638952 EEA1Q15075 1411 aa22.78■■□□□ 1.24
HNRNPU-217ENST00000638952 STAG3Q9UJ98 1225 aa22.76■■□□□ 1.23
HNRNPU-217ENST00000638952 BECN1Q14457 450 aa22.74■■□□□ 1.23
HNRNPU-217ENST00000638952 TSPY4P0CV99 314 aa22.73■■□□□ 1.23
HNRNPU-217ENST00000638952 TSPY10P0CW01 314 aa22.73■■□□□ 1.23
HNRNPU-217ENST00000638952 DNTTIP2Q5QJE6 756 aaKnown RBP22.72■■□□□ 1.23
HNRNPU-217ENST00000638952 PTMAP06454 111 aaKnown RBP22.71■■□□□ 1.23
HNRNPU-217ENST00000638952 NCLP19338 710 aaKnown RBP22.71■■□□□ 1.23
HNRNPU-217ENST00000638952 TNIKQ9UKE5 1360 aa22.7■■□□□ 1.23
HNRNPU-217ENST00000638952 SENP3-EIF4A1A0A087X0R7 540 aa22.7■■□□□ 1.22
HNRNPU-217ENST00000638952 SUPT16HQ9Y5B9 1047 aaKnown RBP22.69■■□□□ 1.22
HNRNPU-217ENST00000638952 GOLGA6L22H0YM25 854 aa22.68■■□□□ 1.22
HNRNPU-217ENST00000638952 ESF1Q9H501 851 aaKnown RBP22.67■■□□□ 1.22
HNRNPU-217ENST00000638952 WRNQ14191 1432 aaPredicted RBP eCLIP22.66■■□□□ 1.22
HNRNPU-217ENST00000638952 CEP164Q9UPV0 1460 aa22.61■■□□□ 1.21
HNRNPU-217ENST00000638952 PPM1GO15355 546 aaPredicted RBP22.6■■□□□ 1.21
HNRNPU-217ENST00000638952 SIN3AQ96ST3 1273 aa22.58■■□□□ 1.21
HNRNPU-217ENST00000638952 AMER1Q5JTC6 1135 aaPredicted RBP22.57■■□□□ 1.2
HNRNPU-217ENST00000638952 PLPPR3Q6T4P5 718 aa22.56■■□□□ 1.2
HNRNPU-217ENST00000638952 RB1CC1Q8TDY2 1594 aa22.54■■□□□ 1.2
HNRNPU-217ENST00000638952 MYH16Q9H6N6 1097 aa22.53■■□□□ 1.2
HNRNPU-217ENST00000638952 NPM1P06748 294 aaKnown RBP eCLIP22.52■■□□□ 1.2
HNRNPU-217ENST00000638952 CHMP7Q8WUX9 453 aaPredicted RBP22.52■■□□□ 1.2
HNRNPU-217ENST00000638952 LAS1LQ9Y4W2 734 aaKnown RBP22.52■■□□□ 1.2
HNRNPU-217ENST00000638952 RGL3Q3MIN7 710 aa22.5■■□□□ 1.19
HNRNPU-217ENST00000638952 PPP4R2Q9NY27 417 aa22.48■■□□□ 1.19
HNRNPU-217ENST00000638952 KIF27Q86VH2 1401 aa22.47■■□□□ 1.19
HNRNPU-217ENST00000638952 SENP3Q9H4L4 574 aaPredicted RBP22.46■■□□□ 1.19
HNRNPU-217ENST00000638952 ZRSR1Q15695 479 aaKnown RBP22.46■■□□□ 1.19
HNRNPU-217ENST00000638952 CARD11Q9BXL7 1154 aa22.44■■□□□ 1.18
HNRNPU-217ENST00000638952 NOP58Q9Y2X3 529 aaKnown RBP22.44■■□□□ 1.18
HNRNPU-217ENST00000638952 BAZ1BQ9UIG0 1483 aaKnown RBP22.44■■□□□ 1.18
HNRNPU-217ENST00000638952 TPRNQ4KMQ1 711 aa22.43■■□□□ 1.18
HNRNPU-217ENST00000638952 KNSTRNQ9Y448 316 aa22.39■■□□□ 1.17
HNRNPU-217ENST00000638952 PLEKHD1A6NEE1 506 aa22.38■■□□□ 1.17
HNRNPU-217ENST00000638952 KCNH8Q96L42 1107 aa22.37■■□□□ 1.17
HNRNPU-217ENST00000638952 CCNB3Q8WWL7 1395 aa22.37■■□□□ 1.17
HNRNPU-217ENST00000638952 DEKP35659 375 aaKnown RBP22.37■■□□□ 1.17
HNRNPU-217ENST00000638952 B4GALNT3Q6L9W6 998 aa22.36■■□□□ 1.17
HNRNPU-217ENST00000638952 PLCB2Q00722 1185 aa22.36■■□□□ 1.17
HNRNPU-217ENST00000638952 CFDP1Q9UEE9 299 aaPredicted RBP22.36■■□□□ 1.17
HNRNPU-217ENST00000638952 SOGA1O94964 1423 aa22.36■■□□□ 1.17
HNRNPU-217ENST00000638952 NACADO15069 1562 aa22.33■■□□□ 1.16
HNRNPU-217ENST00000638952 CFAP53Q96M91 514 aa22.3■■□□□ 1.16
HNRNPU-217ENST00000638952 RGS3P49796 1198 aa22.3■■□□□ 1.16
HNRNPU-217ENST00000638952 ARID4BQ4LE39 1312 aaPredicted RBP22.29■■□□□ 1.16
HNRNPU-217ENST00000638952 CDCA8Q53HL2 280 aa22.29■■□□□ 1.16
HNRNPU-217ENST00000638952 NEUROD2Q15784 382 aa22.28■■□□□ 1.16
HNRNPU-217ENST00000638952 FTSJ3Q8IY81 847 aaKnown RBP22.28■■□□□ 1.16
HNRNPU-217ENST00000638952 CC2D1BQ5T0F9 858 aaKnown RBP22.28■■□□□ 1.16
HNRNPU-217ENST00000638952 CECR2Q9BXF3 1484 aa22.27■■□□□ 1.16
HNRNPU-217ENST00000638952 CHAF1AQ13111 956 aaPredicted RBP22.26■■□□□ 1.15
HNRNPU-217ENST00000638952 BAZ1AQ9NRL2 1556 aaPredicted RBP22.26■■□□□ 1.15
HNRNPU-217ENST00000638952 GOLGA6L6A8MZA4 724 aa22.26■■□□□ 1.15
HNRNPU-217ENST00000638952 MSNP26038 577 aaKnown RBP22.24■■□□□ 1.15
HNRNPU-217ENST00000638952 ZBTB7CA1YPR0 619 aa22.23■■□□□ 1.15
HNRNPU-217ENST00000638952 CCER2I3L3R5 266 aa22.23■■□□□ 1.15
HNRNPU-217ENST00000638952 CASC1Q6TDU7 716 aa22.23■■□□□ 1.15
HNRNPU-217ENST00000638952 RBM19Q9Y4C8 960 aaKnown RBP22.22■■□□□ 1.15
HNRNPU-217ENST00000638952 L1TD1Q5T7N2 865 aaKnown RBP22.22■■□□□ 1.15
HNRNPU-217ENST00000638952 FRAT1Q92837 279 aaPredicted RBP22.21■■□□□ 1.15
HNRNPU-217ENST00000638952 PPP1R15AO75807 674 aaPredicted RBP22.2■■□□□ 1.14
HNRNPU-217ENST00000638952 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.2■■□□□ 1.14
HNRNPU-217ENST00000638952 SETD5Q9C0A6 1442 aa22.2■■□□□ 1.14
HNRNPU-217ENST00000638952 FHAD1B1AJZ9 1412 aa22.19■■□□□ 1.14
HNRNPU-217ENST00000638952 VPS8Q8N3P4 1428 aa22.18■■□□□ 1.14
HNRNPU-217ENST00000638952 PLEKHG5O94827 1062 aa22.17■■□□□ 1.14
HNRNPU-217ENST00000638952 ABCC8Q09428 1581 aa22.17■■□□□ 1.14
HNRNPU-217ENST00000638952 HSPA5P11021 654 aaKnown RBP22.17■■□□□ 1.14
HNRNPU-217ENST00000638952 NRDCO43847 1150 aa22.16■■□□□ 1.14
HNRNPU-217ENST00000638952 C14orf37Q86TY3 774 aa22.16■■□□□ 1.14
HNRNPU-217ENST00000638952 HSP90AB1P08238 724 aaKnown RBP22.15■■□□□ 1.14
HNRNPU-217ENST00000638952 TIMELESSQ9UNS1 1208 aa22.15■■□□□ 1.14
HNRNPU-217ENST00000638952 MAPK8IP3Q9UPT6 1336 aa22.14■■□□□ 1.14
HNRNPU-217ENST00000638952 KANK4Q5T7N3 995 aaPredicted RBP22.14■■□□□ 1.13
HNRNPU-217ENST00000638952 TULP1O00294 542 aaPredicted RBP22.11■■□□□ 1.13
HNRNPU-217ENST00000638952 DCAF11Q8TEB1 546 aa22.11■■□□□ 1.13
HNRNPU-217ENST00000638952 ARID3AQ99856 593 aa22.11■■□□□ 1.13
HNRNPU-217ENST00000638952 CARMIL1Q5VZK9 1371 aa22.1■■□□□ 1.13
HNRNPU-217ENST00000638952 TNNT3P45378 269 aaPredicted RBP22.1■■□□□ 1.13
HNRNPU-217ENST00000638952 EIF4G1Q04637 1599 aaKnown RBP22.09■■□□□ 1.13
HNRNPU-217ENST00000638952 ARHGAP35Q9NRY4 1499 aa22.09■■□□□ 1.13
HNRNPU-217ENST00000638952 CUX2O14529 1486 aa22.09■■□□□ 1.13
HNRNPU-217ENST00000638952 NUDCQ9Y266 331 aa22.06■■□□□ 1.12
HNRNPU-217ENST00000638952 CCDC88BA6NC98 1476 aa22.06■■□□□ 1.12
HNRNPU-217ENST00000638952 TMF1P82094 1093 aa22.06■■□□□ 1.12
HNRNPU-217ENST00000638952 RAB3GAP2Q9H2M9 1393 aa22.05■■□□□ 1.12
HNRNPU-217ENST00000638952 FOXD1Q16676 465 aa22.03■■□□□ 1.12
HNRNPU-217ENST00000638952 MROH2BQ7Z745 1585 aa22.03■■□□□ 1.12
HNRNPU-217ENST00000638952 TSHZ2Q9NRE2 1034 aa22.02■■□□□ 1.11
HNRNPU-217ENST00000638952 PNNQ9H307 717 aaKnown RBP22.01■■□□□ 1.11
HNRNPU-217ENST00000638952 U2SURPO15042 1029 aaKnown RBP22.01■■□□□ 1.11
HNRNPU-217ENST00000638952 DRC7Q8IY82 874 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms