RNA–Protein interactions for RNA: ENST00000638299.1

HMHB1-202, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMHB1, Length 126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-202ENST00000638299 HRCP23327 699 aa4.69□□□□□ -1.66
HMHB1-202ENST00000638299 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.69□□□□□ -1.66
HMHB1-202ENST00000638299 NEUROD2Q15784 382 aa4.67□□□□□ -1.66
HMHB1-202ENST00000638299 NPM2Q86SE8 214 aaKnown RBP4.65□□□□□ -1.67
HMHB1-202ENST00000638299 KCNV2Q8TDN2 545 aa4.65□□□□□ -1.67
HMHB1-202ENST00000638299 ZNF692Q9BU19 519 aaPredicted RBP4.64□□□□□ -1.67
HMHB1-202ENST00000638299 SLC24A3Q9HC58 644 aa4.64□□□□□ -1.67
HMHB1-202ENST00000638299 CADPS2Q86UW7 1296 aa4.63□□□□□ -1.67
HMHB1-202ENST00000638299 ZC3H15Q8WU90 426 aaKnown RBP4.63□□□□□ -1.67
HMHB1-202ENST00000638299 TRIM41Q8WV44 630 aa4.63□□□□□ -1.67
HMHB1-202ENST00000638299 STK25O00506 426 aa4.62□□□□□ -1.67
HMHB1-202ENST00000638299 RIOK3O14730 519 aaKnown RBP4.62□□□□□ -1.67
HMHB1-202ENST00000638299 ABCB7O75027 752 aa4.62□□□□□ -1.67
HMHB1-202ENST00000638299 PABPN1Q86U42 306 aaKnown RBP eCLIP4.62□□□□□ -1.67
HMHB1-202ENST00000638299 CAPN15O75808 1086 aa4.6□□□□□ -1.67
HMHB1-202ENST00000638299 P3H3Q8IVL6 736 aa4.6□□□□□ -1.67
HMHB1-202ENST00000638299 ARID3AQ99856 593 aa4.6□□□□□ -1.67
HMHB1-202ENST00000638299 ZMYND15Q9H091 742 aa4.59□□□□□ -1.67
HMHB1-202ENST00000638299 SSUH2Q9Y2M2 353 aa4.59□□□□□ -1.67
HMHB1-202ENST00000638299 NUBP1P53384 320 aa4.58□□□□□ -1.68
HMHB1-202ENST00000638299 OSCARQ8IYS5 282 aa4.58□□□□□ -1.68
HMHB1-202ENST00000638299 C1orf115Q9H7X2 142 aa4.58□□□□□ -1.68
HMHB1-202ENST00000638299 STK24Q9Y6E0 443 aa4.58□□□□□ -1.68
HMHB1-202ENST00000638299 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.57□□□□□ -1.68
HMHB1-202ENST00000638299 GSE1Q14687 1217 aa4.57□□□□□ -1.68
HMHB1-202ENST00000638299 DCAF8Q5TAQ9 597 aa4.57□□□□□ -1.68
HMHB1-202ENST00000638299 ZFP91Q96JP5 570 aaPredicted RBP4.57□□□□□ -1.68
HMHB1-202ENST00000638299 BCL11BQ9C0K0 894 aaPredicted RBP4.57□□□□□ -1.68
HMHB1-202ENST00000638299 VGFO15240 615 aaPredicted RBP4.56□□□□□ -1.68
HMHB1-202ENST00000638299 WDR70Q9NW82 654 aa4.56□□□□□ -1.68
HMHB1-202ENST00000638299 ZBTB47Q9UFB7 747 aaPredicted RBP4.56□□□□□ -1.68
HMHB1-202ENST00000638299 ZBTB12Q9Y330 459 aaPredicted RBP4.56□□□□□ -1.68
HMHB1-202ENST00000638299 PLEKHG5O94827 1062 aa4.55□□□□□ -1.68
HMHB1-202ENST00000638299 RSPH6AQ9H0K4 717 aa4.55□□□□□ -1.68
HMHB1-202ENST00000638299 GPBP1L1Q9HC44 474 aaPredicted RBP4.55□□□□□ -1.68
HMHB1-202ENST00000638299 SEMA3EO15041 775 aa4.54□□□□□ -1.68
HMHB1-202ENST00000638299 SPDYE2BA6NHP3 402 aa4.53□□□□□ -1.68
HMHB1-202ENST00000638299 ARID3CA6NKF2 412 aa4.53□□□□□ -1.68
HMHB1-202ENST00000638299 ZMYND10O75800 440 aa4.53□□□□□ -1.68
HMHB1-202ENST00000638299 SPDYE6P0CI01 402 aa4.53□□□□□ -1.68
HMHB1-202ENST00000638299 SPDYE2Q495Y8 402 aa4.53□□□□□ -1.68
HMHB1-202ENST00000638299 IL27Q8NEV9 243 aa4.53□□□□□ -1.68
HMHB1-202ENST00000638299 TESPA1A2RU30 521 aaPredicted RBP4.52□□□□□ -1.69
HMHB1-202ENST00000638299 SGIP1Q9BQI5 828 aa4.51□□□□□ -1.69
HMHB1-202ENST00000638299 NECTIN2Q92692 538 aa4.5□□□□□ -1.69
HMHB1-202ENST00000638299 MKRN3Q13064 507 aaKnown RBP4.49□□□□□ -1.69
HMHB1-202ENST00000638299 RYDENQ9NUL5 291 aaKnown RBP4.49□□□□□ -1.69
HMHB1-202ENST00000638299 PYGBP11216 843 aa4.48□□□□□ -1.69
HMHB1-202ENST00000638299 BARGINQ6ZT62 677 aa4.48□□□□□ -1.69
HMHB1-202ENST00000638299 ARHGEF1Q92888 912 aaKnown RBP4.48□□□□□ -1.69
HMHB1-202ENST00000638299 APBB1O00213 710 aa4.47□□□□□ -1.69
HMHB1-202ENST00000638299 CHRM1P11229 460 aaPredicted RBP4.47□□□□□ -1.69
HMHB1-202ENST00000638299 PPP1R37O75864 691 aa4.46□□□□□ -1.7
HMHB1-202ENST00000638299 E2F4Q16254 413 aa4.46□□□□□ -1.7
HMHB1-202ENST00000638299 RASEFQ8IZ41 740 aa4.46□□□□□ -1.7
HMHB1-202ENST00000638299 KDM4CQ9H3R0 1056 aa4.46□□□□□ -1.7
HMHB1-202ENST00000638299 FAM212AQ96EL1 285 aa4.45□□□□□ -1.7
HMHB1-202ENST00000638299 AK7Q96M32 723 aa4.45□□□□□ -1.7
HMHB1-202ENST00000638299 LOC105371045A0A1W2PR82 267 aa4.44□□□□□ -1.7
HMHB1-202ENST00000638299 PDIA4P13667 645 aaKnown RBP4.44□□□□□ -1.7
HMHB1-202ENST00000638299 MNX1P50219 401 aaPredicted RBP4.44□□□□□ -1.7
HMHB1-202ENST00000638299 RNF39Q9H2S5 420 aa4.44□□□□□ -1.7
HMHB1-202ENST00000638299 CCDC9Q9Y3X0 531 aaKnown RBP4.44□□□□□ -1.7
HMHB1-202ENST00000638299 ZBTB7CA1YPR0 619 aa4.43□□□□□ -1.7
HMHB1-202ENST00000638299 RBM26Q5T8P6 1007 aaKnown RBP4.43□□□□□ -1.7
HMHB1-202ENST00000638299 MFRPQ9BY79 579 aa4.43□□□□□ -1.7
HMHB1-202ENST00000638299 TRIM66O15016 1216 aa4.42□□□□□ -1.7
HMHB1-202ENST00000638299 DSG3P32926 999 aa4.42□□□□□ -1.7
HMHB1-202ENST00000638299 KRI1Q8N9T8 703 aaKnown RBP4.42□□□□□ -1.7
HMHB1-202ENST00000638299 FAM117AQ9C073 453 aa4.42□□□□□ -1.7
HMHB1-202ENST00000638299 CREBZFQ9NS37 354 aa4.42□□□□□ -1.7
HMHB1-202ENST00000638299 PDE4DQ08499 809 aa4.41□□□□□ -1.7
HMHB1-202ENST00000638299 CCDC82Q8N4S0 544 aa4.41□□□□□ -1.7
HMHB1-202ENST00000638299 ZNF316A6NFI3 1004 aaPredicted RBP4.4□□□□□ -1.71
HMHB1-202ENST00000638299 MLLT3P42568 568 aaPredicted RBP4.4□□□□□ -1.71
HMHB1-202ENST00000638299 CLUAP1Q96AJ1 413 aa4.4□□□□□ -1.71
HMHB1-202ENST00000638299 PLEKHG3A1L390 1219 aa4.39□□□□□ -1.71
HMHB1-202ENST00000638299 SMYD5Q6GMV2 418 aa4.39□□□□□ -1.71
HMHB1-202ENST00000638299 GPIHBP1Q8IV16 184 aa4.38□□□□□ -1.71
HMHB1-202ENST00000638299 NCKAP5LQ9HCH0 1330 aa4.38□□□□□ -1.71
HMHB1-202ENST00000638299 KCTD17Q8N5Z5 321 aa4.37□□□□□ -1.71
HMHB1-202ENST00000638299 LARP6Q9BRS8 491 aaKnown RBP4.37□□□□□ -1.71
HMHB1-202ENST00000638299 PCDHB8Q9UN66 801 aa4.37□□□□□ -1.71
HMHB1-202ENST00000638299 PCDHB13Q9Y5F0 798 aa4.37□□□□□ -1.71
HMHB1-202ENST00000638299 TRAK2O60296 914 aa4.36□□□□□ -1.71
HMHB1-202ENST00000638299 ONECUT3O60422 494 aaPredicted RBP4.36□□□□□ -1.71
HMHB1-202ENST00000638299 C1QBPQ07021 282 aaKnown RBP4.36□□□□□ -1.71
HMHB1-202ENST00000638299 IGSF3O75054 1194 aa4.35□□□□□ -1.71
HMHB1-202ENST00000638299 FBXO22Q8NEZ5 403 aa4.35□□□□□ -1.71
HMHB1-202ENST00000638299 ZNF428Q96B54 188 aa4.35□□□□□ -1.71
HMHB1-202ENST00000638299 RAD21O60216 631 aa4.34□□□□□ -1.71
HMHB1-202ENST00000638299 FLIIQ13045 1269 aa4.34□□□□□ -1.71
HMHB1-202ENST00000638299 PDAP1Q13442 181 aaKnown RBP4.34□□□□□ -1.71
HMHB1-202ENST00000638299 AEBP1Q8IUX7 1158 aa4.34□□□□□ -1.71
HMHB1-202ENST00000638299 ZNF777Q9ULD5 760 aaPredicted RBP4.34□□□□□ -1.71
HMHB1-202ENST00000638299 PHF8Q9UPP1 1060 aa4.34□□□□□ -1.71
HMHB1-202ENST00000638299 A6NJR5 290 aa4.33□□□□□ -1.72
HMHB1-202ENST00000638299 PSEN1P49768 467 aa4.33□□□□□ -1.72
HMHB1-202ENST00000638299 MFSD10Q14728 455 aa4.33□□□□□ -1.72
HMHB1-202ENST00000638299 RGS22Q8NE09 1264 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms