RNA–Protein interactions for RNA: ENST00000638083.1

CACNB4-272, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

Gene CACNB4, Length 6,849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-272ENST00000638083 CECR2Q9BXF3 1484 aa10.61□□□□□ -0.71
CACNB4-272ENST00000638083 HAP1P54257 671 aaPredicted RBP10.59□□□□□ -0.71
CACNB4-272ENST00000638083 SMARCA2P51531 1590 aa10.59□□□□□ -0.71
CACNB4-272ENST00000638083 PLEKHG5O94827 1062 aa10.59□□□□□ -0.71
CACNB4-272ENST00000638083 TSPY4P0CV99 314 aa10.59□□□□□ -0.71
CACNB4-272ENST00000638083 TSPY10P0CW01 314 aa10.59□□□□□ -0.71
CACNB4-272ENST00000638083 PLEKHD1A6NEE1 506 aa10.59□□□□□ -0.71
CACNB4-272ENST00000638083 CHIC2Q9UKJ5 165 aa10.58□□□□□ -0.72
CACNB4-272ENST00000638083 UPF2Q9HAU5 1272 aaKnown RBP10.58□□□□□ -0.72
CACNB4-272ENST00000638083 PDS5BQ9NTI5 1447 aa10.57□□□□□ -0.72
CACNB4-272ENST00000638083 EEA1Q15075 1411 aa10.57□□□□□ -0.72
CACNB4-272ENST00000638083 MTUS2Q5JR59 1369 aa10.57□□□□□ -0.72
CACNB4-272ENST00000638083 CLIP1P30622 1438 aa10.56□□□□□ -0.72
CACNB4-272ENST00000638083 MIER1Q8N108 512 aa10.55□□□□□ -0.72
CACNB4-272ENST00000638083 CCDC136Q96JN2 1154 aa10.55□□□□□ -0.72
CACNB4-272ENST00000638083 GLIPR1L2Q4G1C9 344 aa10.55□□□□□ -0.72
CACNB4-272ENST00000638083 AEBP2Q6ZN18 517 aaPredicted RBP10.55□□□□□ -0.72
CACNB4-272ENST00000638083 CEP162Q5TB80 1403 aa10.54□□□□□ -0.72
CACNB4-272ENST00000638083 TONSLQ96HA7 1378 aa10.54□□□□□ -0.72
CACNB4-272ENST00000638083 SENP3-EIF4A1A0A087X0R7 540 aa10.54□□□□□ -0.72
CACNB4-272ENST00000638083 HIRIP3Q9BW71 556 aaPredicted RBP10.53□□□□□ -0.72
CACNB4-272ENST00000638083 KIF27Q86VH2 1401 aa10.51□□□□□ -0.73
CACNB4-272ENST00000638083 TNIKQ9UKE5 1360 aa10.5□□□□□ -0.73
CACNB4-272ENST00000638083 GOLGA3Q08378 1498 aa10.5□□□□□ -0.73
CACNB4-272ENST00000638083 TMC1Q8TDI8 760 aa10.49□□□□□ -0.73
CACNB4-272ENST00000638083 WRNQ14191 1432 aaPredicted RBP eCLIP10.49□□□□□ -0.73
CACNB4-272ENST00000638083 TPRNQ4KMQ1 711 aa10.48□□□□□ -0.73
CACNB4-272ENST00000638083 MLECQ14165 292 aa10.48□□□□□ -0.73
CACNB4-272ENST00000638083 KDM2AQ9Y2K7 1162 aa10.47□□□□□ -0.73
CACNB4-272ENST00000638083 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.44□□□□□ -0.74
CACNB4-272ENST00000638083 CEP164Q9UPV0 1460 aa10.44□□□□□ -0.74
CACNB4-272ENST00000638083 MRS2Q9HD23 443 aa10.43□□□□□ -0.74
CACNB4-272ENST00000638083 WDR43Q15061 677 aaKnown RBP eCLIP10.43□□□□□ -0.74
CACNB4-272ENST00000638083 CUX2O14529 1486 aa10.42□□□□□ -0.74
CACNB4-272ENST00000638083 RTN4Q9NQC3 1192 aaKnown RBP10.42□□□□□ -0.74
CACNB4-272ENST00000638083 CFDP1Q9UEE9 299 aaPredicted RBP10.41□□□□□ -0.74
CACNB4-272ENST00000638083 CARMIL2Q6F5E8 1435 aa10.41□□□□□ -0.74
CACNB4-272ENST00000638083 SOGA1O94964 1423 aa10.4□□□□□ -0.75
CACNB4-272ENST00000638083 RRP7BPQ9NSQ0 103 aa10.39□□□□□ -0.75
CACNB4-272ENST00000638083 KANK1Q14678 1352 aa10.39□□□□□ -0.75
CACNB4-272ENST00000638083 NCLP19338 710 aaKnown RBP10.39□□□□□ -0.75
CACNB4-272ENST00000638083 TULP1O00294 542 aaPredicted RBP10.38□□□□□ -0.75
CACNB4-272ENST00000638083 LMOD2Q6P5Q4 547 aa10.37□□□□□ -0.75
CACNB4-272ENST00000638083 TRIM44Q96DX7 344 aaPredicted RBP10.37□□□□□ -0.75
CACNB4-272ENST00000638083 CDK11BP21127 795 aaKnown RBP10.37□□□□□ -0.75
CACNB4-272ENST00000638083 WIZO95785 1651 aa10.36□□□□□ -0.75
CACNB4-272ENST00000638083 TAOK2Q9UL54 1235 aa10.36□□□□□ -0.75
CACNB4-272ENST00000638083 HDGFP51858 240 aaKnown RBP10.36□□□□□ -0.75
CACNB4-272ENST00000638083 MYH16Q9H6N6 1097 aa10.34□□□□□ -0.75
CACNB4-272ENST00000638083 CCNB3Q8WWL7 1395 aa10.34□□□□□ -0.75
CACNB4-272ENST00000638083 CCDC88BA6NC98 1476 aa10.33□□□□□ -0.76
CACNB4-272ENST00000638083 TOP2AP11388 1531 aaKnown RBP10.33□□□□□ -0.76
CACNB4-272ENST00000638083 CARMIL1Q5VZK9 1371 aa10.33□□□□□ -0.76
CACNB4-272ENST00000638083 EIF4G2P78344 907 aaKnown RBP eCLIP10.32□□□□□ -0.76
CACNB4-272ENST00000638083 SMARCA4P51532 1647 aa10.32□□□□□ -0.76
CACNB4-272ENST00000638083 MROH2BQ7Z745 1585 aa10.32□□□□□ -0.76
CACNB4-272ENST00000638083 DNTTIP2Q5QJE6 756 aaKnown RBP10.32□□□□□ -0.76
CACNB4-272ENST00000638083 LAS1LQ9Y4W2 734 aaKnown RBP10.32□□□□□ -0.76
CACNB4-272ENST00000638083 POGKQ9P215 609 aa10.31□□□□□ -0.76
CACNB4-272ENST00000638083 PTMAP06454 111 aaKnown RBP10.31□□□□□ -0.76
CACNB4-272ENST00000638083 OSCARQ8IYS5 282 aa10.3□□□□□ -0.76
CACNB4-272ENST00000638083 RGL3Q3MIN7 710 aa10.3□□□□□ -0.76
CACNB4-272ENST00000638083 NPHP1O15259 732 aa10.3□□□□□ -0.76
CACNB4-272ENST00000638083 BECN1Q14457 450 aa10.29□□□□□ -0.76
CACNB4-272ENST00000638083 SUPT16HQ9Y5B9 1047 aaKnown RBP10.29□□□□□ -0.76
CACNB4-272ENST00000638083 NAP1L5Q96NT1 182 aaPredicted RBP10.28□□□□□ -0.76
CACNB4-272ENST00000638083 PLCB2Q00722 1185 aa10.28□□□□□ -0.76
CACNB4-272ENST00000638083 CYB5RLQ6IPT4 315 aa10.27□□□□□ -0.76
CACNB4-272ENST00000638083 FANCD2Q9BXW9 1451 aa10.27□□□□□ -0.76
CACNB4-272ENST00000638083 AMER1Q5JTC6 1135 aaPredicted RBP10.27□□□□□ -0.76
CACNB4-272ENST00000638083 DDRGK1Q96HY6 314 aa10.27□□□□□ -0.77
CACNB4-272ENST00000638083 TDRD9Q8NDG6 1382 aaKnown RBP10.27□□□□□ -0.77
CACNB4-272ENST00000638083 CADPSQ9ULU8 1353 aa10.27□□□□□ -0.77
CACNB4-272ENST00000638083 PPM1GO15355 546 aaPredicted RBP10.26□□□□□ -0.77
CACNB4-272ENST00000638083 NEUROD2Q15784 382 aa10.25□□□□□ -0.77
CACNB4-272ENST00000638083 ABCC8Q09428 1581 aa10.25□□□□□ -0.77
CACNB4-272ENST00000638083 GOLGA6L22H0YM25 854 aa10.25□□□□□ -0.77
CACNB4-272ENST00000638083 VPS8Q8N3P4 1428 aa10.25□□□□□ -0.77
CACNB4-272ENST00000638083 GGT6Q6P531 493 aa10.25□□□□□ -0.77
CACNB4-272ENST00000638083 ANP32EQ9BTT0 268 aa10.24□□□□□ -0.77
CACNB4-272ENST00000638083 TIMELESSQ9UNS1 1208 aa10.24□□□□□ -0.77
CACNB4-272ENST00000638083 TNNT2P45379 298 aaPredicted RBP10.24□□□□□ -0.77
CACNB4-272ENST00000638083 FHAD1B1AJZ9 1412 aa10.24□□□□□ -0.77
CACNB4-272ENST00000638083 SIN3AQ96ST3 1273 aa10.24□□□□□ -0.77
CACNB4-272ENST00000638083 RGS3P49796 1198 aa10.23□□□□□ -0.77
CACNB4-272ENST00000638083 CC2D2AQ9P2K1 1620 aa10.23□□□□□ -0.77
CACNB4-272ENST00000638083 ZRSR1Q15695 479 aaKnown RBP10.22□□□□□ -0.77
CACNB4-272ENST00000638083 ATAD2BQ9ULI0 1458 aa10.22□□□□□ -0.77
CACNB4-272ENST00000638083 CCDC9Q9Y3X0 531 aaKnown RBP10.21□□□□□ -0.77
CACNB4-272ENST00000638083 PRDM2Q13029 1718 aa10.2□□□□□ -0.78
CACNB4-272ENST00000638083 FTSJ3Q8IY81 847 aaKnown RBP10.2□□□□□ -0.78
CACNB4-272ENST00000638083 MEX3CQ5U5Q3 659 aaKnown RBP10.19□□□□□ -0.78
CACNB4-272ENST00000638083 SPRYD3Q8NCJ5 442 aa10.19□□□□□ -0.78
CACNB4-272ENST00000638083 EID1Q9Y6B2 187 aa10.19□□□□□ -0.78
CACNB4-272ENST00000638083 FRAT1Q92837 279 aaPredicted RBP10.18□□□□□ -0.78
CACNB4-272ENST00000638083 CDCA8Q53HL2 280 aa10.17□□□□□ -0.78
CACNB4-272ENST00000638083 NCBP3Q53F19 620 aaKnown RBP10.17□□□□□ -0.78
CACNB4-272ENST00000638083 B4GALNT3Q6L9W6 998 aa10.17□□□□□ -0.78
CACNB4-272ENST00000638083 CFAP53Q96M91 514 aa10.16□□□□□ -0.78
CACNB4-272ENST00000638083 CCER2I3L3R5 266 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms