RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 MRS2Q9HD23 443 aa19.55■□□□□ 0.72
UBE3A-227ENST00000638011 CALRP27797 417 aaKnown RBP19.55■□□□□ 0.72
UBE3A-227ENST00000638011 KIAA2012Q0VF49 1180 aa19.53■□□□□ 0.72
UBE3A-227ENST00000638011 SETQ01105 290 aaPredicted RBP19.51■□□□□ 0.71
UBE3A-227ENST00000638011 GOLGA6L1Q8N7Z2 621 aa19.51■□□□□ 0.71
UBE3A-227ENST00000638011 RSPH6AQ9H0K4 717 aa19.5■□□□□ 0.71
UBE3A-227ENST00000638011 PNNQ9H307 717 aaKnown RBP19.49■□□□□ 0.71
UBE3A-227ENST00000638011 DDX10Q13206 875 aaKnown RBP19.49■□□□□ 0.71
UBE3A-227ENST00000638011 MS4A1P11836 297 aa19.48■□□□□ 0.71
UBE3A-227ENST00000638011 DEKP35659 375 aaKnown RBP19.45■□□□□ 0.7
UBE3A-227ENST00000638011 PPP4R2Q9NY27 417 aa19.44■□□□□ 0.7
UBE3A-227ENST00000638011 SYAP1Q96A49 352 aaPredicted RBP19.43■□□□□ 0.7
UBE3A-227ENST00000638011 HSP90AB1P08238 724 aaKnown RBP19.42■□□□□ 0.7
UBE3A-227ENST00000638011 RTN4Q9NQC3 1192 aaKnown RBP19.42■□□□□ 0.7
UBE3A-227ENST00000638011 HSCBQ8IWL3 235 aa19.41■□□□□ 0.7
UBE3A-227ENST00000638011 FTSJ3Q8IY81 847 aaKnown RBP19.41■□□□□ 0.7
UBE3A-227ENST00000638011 GOLGA6L4A6NEF3 574 aa19.4■□□□□ 0.7
UBE3A-227ENST00000638011 HSP90AA2PQ14568 343 aaPredicted RBP19.38■□□□□ 0.69
UBE3A-227ENST00000638011 A0A0U1RQG5 324 aaPredicted RBP19.38■□□□□ 0.69
UBE3A-227ENST00000638011 GBP4Q96PP9 640 aa19.38■□□□□ 0.69
UBE3A-227ENST00000638011 DRC7Q8IY82 874 aa19.36■□□□□ 0.69
UBE3A-227ENST00000638011 PLCB2Q00722 1185 aa19.33■□□□□ 0.69
UBE3A-227ENST00000638011 MCCP23508 829 aa19.33■□□□□ 0.68
UBE3A-227ENST00000638011 CDCA8Q53HL2 280 aa19.33■□□□□ 0.68
UBE3A-227ENST00000638011 GOLGA6L3A6NEY3 463 aa19.32■□□□□ 0.68
UBE3A-227ENST00000638011 NOC3LQ8WTT2 800 aaKnown RBP19.32■□□□□ 0.68
UBE3A-227ENST00000638011 EIF4G2P78344 907 aaKnown RBP eCLIP19.32■□□□□ 0.68
UBE3A-227ENST00000638011 PHF14O94880 888 aa19.31■□□□□ 0.68
UBE3A-227ENST00000638011 HTATSF1O43719 755 aaKnown RBP19.29■□□□□ 0.68
UBE3A-227ENST00000638011 LAS1LQ9Y4W2 734 aaKnown RBP19.28■□□□□ 0.68
UBE3A-227ENST00000638011 CCDC34Q96HJ3 373 aa19.28■□□□□ 0.68
UBE3A-227ENST00000638011 CFAP53Q96M91 514 aa19.26■□□□□ 0.67
UBE3A-227ENST00000638011 AMER1Q5JTC6 1135 aaPredicted RBP19.26■□□□□ 0.67
UBE3A-227ENST00000638011 ESF1Q9H501 851 aaKnown RBP19.26■□□□□ 0.67
UBE3A-227ENST00000638011 MIER1Q8N108 512 aa19.25■□□□□ 0.67
UBE3A-227ENST00000638011 TPM4P67936 248 aa19.24■□□□□ 0.67
UBE3A-227ENST00000638011 SALL2Q9Y467 1007 aaPredicted RBP19.24■□□□□ 0.67
UBE3A-227ENST00000638011 FGD1P98174 961 aa19.22■□□□□ 0.67
UBE3A-227ENST00000638011 GPS2Q13227 327 aa19.22■□□□□ 0.67
UBE3A-227ENST00000638011 CSPP1Q1MSJ5 1256 aa19.21■□□□□ 0.67
UBE3A-227ENST00000638011 MTERF4Q7Z6M4 381 aaKnown RBP19.18■□□□□ 0.66
UBE3A-227ENST00000638011 STAG3Q9UJ98 1225 aa19.18■□□□□ 0.66
UBE3A-227ENST00000638011 IRX6P78412 446 aaPredicted RBP19.17■□□□□ 0.66
UBE3A-227ENST00000638011 NOM1Q5C9Z4 860 aaKnown RBP19.16■□□□□ 0.66
UBE3A-227ENST00000638011 HAP1P54257 671 aaPredicted RBP19.16■□□□□ 0.66
UBE3A-227ENST00000638011 SUPT16HQ9Y5B9 1047 aaKnown RBP19.15■□□□□ 0.66
UBE3A-227ENST00000638011 CSRNP3Q8WYN3 585 aa19.15■□□□□ 0.66
UBE3A-227ENST00000638011 KCNJ4P48050 445 aa19.13■□□□□ 0.65
UBE3A-227ENST00000638011 TEX35Q5T0J7 233 aa19.12■□□□□ 0.65
UBE3A-227ENST00000638011 KNSTRNQ9Y448 316 aa19.11■□□□□ 0.65
UBE3A-227ENST00000638011 CCDC70Q6NSX1 233 aa19.07■□□□□ 0.64
UBE3A-227ENST00000638011 MAP7D2Q96T17 732 aa19.07■□□□□ 0.64
UBE3A-227ENST00000638011 RBM19Q9Y4C8 960 aaKnown RBP19.06■□□□□ 0.64
UBE3A-227ENST00000638011 DDX11L8A8MPP1 907 aa19.05■□□□□ 0.64
UBE3A-227ENST00000638011 TCERG1O14776 1098 aaKnown RBP19.04■□□□□ 0.64
UBE3A-227ENST00000638011 GNL2Q13823 731 aaKnown RBP19.03■□□□□ 0.64
UBE3A-227ENST00000638011 RGS3P49796 1198 aa19.02■□□□□ 0.64
UBE3A-227ENST00000638011 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.02■□□□□ 0.63
UBE3A-227ENST00000638011 ZNF777Q9ULD5 760 aaPredicted RBP19.01■□□□□ 0.63
UBE3A-227ENST00000638011 MAPK8IP3Q9UPT6 1336 aa19.01■□□□□ 0.63
UBE3A-227ENST00000638011 RSF1Q96T23 1441 aaPredicted RBP19.01■□□□□ 0.63
UBE3A-227ENST00000638011 NUDCQ9Y266 331 aa19■□□□□ 0.63
UBE3A-227ENST00000638011 APPP05067 770 aa19■□□□□ 0.63
UBE3A-227ENST00000638011 CALD1Q05682 793 aaKnown RBP19■□□□□ 0.63
UBE3A-227ENST00000638011 TPM3P06753 285 aa18.99■□□□□ 0.63
UBE3A-227ENST00000638011 KIAA1211Q6ZU35 1233 aa18.99■□□□□ 0.63
UBE3A-227ENST00000638011 SKOR2Q2VWA4 1001 aaPredicted RBP18.98■□□□□ 0.63
UBE3A-227ENST00000638011 EEA1Q15075 1411 aa18.98■□□□□ 0.63
UBE3A-227ENST00000638011 IPO9Q96P70 1041 aaKnown RBP18.97■□□□□ 0.63
UBE3A-227ENST00000638011 VSIG10Q8N0Z9 540 aa18.97■□□□□ 0.63
UBE3A-227ENST00000638011 CCER2I3L3R5 266 aa18.97■□□□□ 0.63
UBE3A-227ENST00000638011 CWC15Q9P013 229 aaKnown RBP18.97■□□□□ 0.63
UBE3A-227ENST00000638011 MTUS2Q5JR59 1369 aa18.96■□□□□ 0.63
UBE3A-227ENST00000638011 ZNF771Q7L3S4 317 aaPredicted RBP18.95■□□□□ 0.62
UBE3A-227ENST00000638011 HMMRO75330 724 aa18.95■□□□□ 0.62
UBE3A-227ENST00000638011 RRP12Q5JTH9 1297 aaKnown RBP18.95■□□□□ 0.62
UBE3A-227ENST00000638011 TSPY4P0CV99 314 aa18.94■□□□□ 0.62
UBE3A-227ENST00000638011 TSPY10P0CW01 314 aa18.94■□□□□ 0.62
UBE3A-227ENST00000638011 KIF3AQ9Y496 699 aa18.94■□□□□ 0.62
UBE3A-227ENST00000638011 OS9Q13438 667 aaPredicted RBP18.94■□□□□ 0.62
UBE3A-227ENST00000638011 CHMP4CQ96CF2 233 aa18.93■□□□□ 0.62
UBE3A-227ENST00000638011 CCDC66A2RUB6 948 aa18.93■□□□□ 0.62
UBE3A-227ENST00000638011 TPRNQ4KMQ1 711 aa18.93■□□□□ 0.62
UBE3A-227ENST00000638011 CHMP4AQ9BY43 222 aa18.92■□□□□ 0.62
UBE3A-227ENST00000638011 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.92■□□□□ 0.62
UBE3A-227ENST00000638011 CHGAP10645 457 aaKnown RBP18.91■□□□□ 0.62
UBE3A-227ENST00000638011 GOLGA2Q08379 1002 aa18.91■□□□□ 0.62
UBE3A-227ENST00000638011 ATP6V1DQ9Y5K8 247 aa18.9■□□□□ 0.62
UBE3A-227ENST00000638011 IPO8O15397 1037 aaKnown RBP18.9■□□□□ 0.62
UBE3A-227ENST00000638011 KIF16BQ96L93 1317 aa18.89■□□□□ 0.61
UBE3A-227ENST00000638011 TSR1Q2NL82 804 aaKnown RBP18.88■□□□□ 0.61
UBE3A-227ENST00000638011 ACBD3Q9H3P7 528 aa18.88■□□□□ 0.61
UBE3A-227ENST00000638011 CEP89Q96ST8 783 aa18.88■□□□□ 0.61
UBE3A-227ENST00000638011 CDR1P51861 262 aa18.87■□□□□ 0.61
UBE3A-227ENST00000638011 NAP1L2Q9ULW6 460 aaPredicted RBP18.87■□□□□ 0.61
UBE3A-227ENST00000638011 TIMELESSQ9UNS1 1208 aa18.87■□□□□ 0.61
UBE3A-227ENST00000638011 CLIP1P30622 1438 aa18.86■□□□□ 0.61
UBE3A-227ENST00000638011 TPM1P09493 284 aa18.86■□□□□ 0.61
UBE3A-227ENST00000638011 TAF3Q5VWG9 929 aa18.86■□□□□ 0.61
UBE3A-227ENST00000638011 B4GALNT3Q6L9W6 998 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms