RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 MRS2Q9HD23 443 aa19.37■□□□□ 0.69
GABRB3-219ENST00000636466 TMC1Q8TDI8 760 aa19.36■□□□□ 0.69
GABRB3-219ENST00000636466 SIN3AQ96ST3 1273 aa19.35■□□□□ 0.69
GABRB3-219ENST00000636466 NPM1P06748 294 aaKnown RBP eCLIP19.35■□□□□ 0.69
GABRB3-219ENST00000636466 KIF27Q86VH2 1401 aa19.35■□□□□ 0.69
GABRB3-219ENST00000636466 STAG3Q9UJ98 1225 aa19.34■□□□□ 0.69
GABRB3-219ENST00000636466 ZBTB47Q9UFB7 747 aaPredicted RBP19.34■□□□□ 0.69
GABRB3-219ENST00000636466 NEFMP07197 916 aa19.33■□□□□ 0.68
GABRB3-219ENST00000636466 RGL3Q3MIN7 710 aa19.31■□□□□ 0.68
GABRB3-219ENST00000636466 ABCC8Q09428 1581 aa19.3■□□□□ 0.68
GABRB3-219ENST00000636466 ESF1Q9H501 851 aaKnown RBP19.3■□□□□ 0.68
GABRB3-219ENST00000636466 CEP164Q9UPV0 1460 aa19.28■□□□□ 0.68
GABRB3-219ENST00000636466 CCDC88BA6NC98 1476 aa19.27■□□□□ 0.68
GABRB3-219ENST00000636466 PLEKHD1A6NEE1 506 aa19.25■□□□□ 0.67
GABRB3-219ENST00000636466 EIF4G2P78344 907 aaKnown RBP eCLIP19.24■□□□□ 0.67
GABRB3-219ENST00000636466 ANP32AP39687 249 aaKnown RBP19.24■□□□□ 0.67
GABRB3-219ENST00000636466 KANK4Q5T7N3 995 aaPredicted RBP19.23■□□□□ 0.67
GABRB3-219ENST00000636466 CFDP1Q9UEE9 299 aaPredicted RBP19.22■□□□□ 0.67
GABRB3-219ENST00000636466 CCDC136Q96JN2 1154 aa19.2■□□□□ 0.66
GABRB3-219ENST00000636466 CUX2O14529 1486 aa19.18■□□□□ 0.66
GABRB3-219ENST00000636466 CARMIL1Q5VZK9 1371 aa19.17■□□□□ 0.66
GABRB3-219ENST00000636466 PLEKHG5O94827 1062 aa19.12■□□□□ 0.65
GABRB3-219ENST00000636466 WDR43Q15061 677 aaKnown RBP eCLIP19.1■□□□□ 0.65
GABRB3-219ENST00000636466 WIZO95785 1651 aa19.09■□□□□ 0.65
GABRB3-219ENST00000636466 TDRD9Q8NDG6 1382 aaKnown RBP19.09■□□□□ 0.65
GABRB3-219ENST00000636466 CCNB3Q8WWL7 1395 aa19.07■□□□□ 0.64
GABRB3-219ENST00000636466 NBR1Q14596 966 aa19.04■□□□□ 0.64
GABRB3-219ENST00000636466 FOXD1Q16676 465 aa19.03■□□□□ 0.64
GABRB3-219ENST00000636466 SUPT16HQ9Y5B9 1047 aaKnown RBP19.03■□□□□ 0.64
GABRB3-219ENST00000636466 CARD11Q9BXL7 1154 aa19.01■□□□□ 0.63
GABRB3-219ENST00000636466 ERCC6Q03468 1493 aa19■□□□□ 0.63
GABRB3-219ENST00000636466 RUSC2Q8N2Y8 1516 aa18.99■□□□□ 0.63
GABRB3-219ENST00000636466 VPS8Q8N3P4 1428 aa18.98■□□□□ 0.63
GABRB3-219ENST00000636466 EIF4G1Q04637 1599 aaKnown RBP18.97■□□□□ 0.63
GABRB3-219ENST00000636466 HSP90AA1P07900 732 aaKnown RBP18.95■□□□□ 0.62
GABRB3-219ENST00000636466 ARXQ96QS3 562 aa18.93■□□□□ 0.62
GABRB3-219ENST00000636466 NEUROD2Q15784 382 aa18.93■□□□□ 0.62
GABRB3-219ENST00000636466 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.92■□□□□ 0.62
GABRB3-219ENST00000636466 FHAD1B1AJZ9 1412 aa18.9■□□□□ 0.62
GABRB3-219ENST00000636466 PPM1GO15355 546 aaPredicted RBP18.89■□□□□ 0.61
GABRB3-219ENST00000636466 TNNT2P45379 298 aaPredicted RBP18.89■□□□□ 0.61
GABRB3-219ENST00000636466 PPP1R15AO75807 674 aaPredicted RBP18.88■□□□□ 0.61
GABRB3-219ENST00000636466 UPF2Q9HAU5 1272 aaKnown RBP18.88■□□□□ 0.61
GABRB3-219ENST00000636466 DCAF11Q8TEB1 546 aa18.88■□□□□ 0.61
GABRB3-219ENST00000636466 ZBTB7CA1YPR0 619 aa18.87■□□□□ 0.61
GABRB3-219ENST00000636466 RAPGEF2Q9Y4G8 1499 aa18.86■□□□□ 0.61
GABRB3-219ENST00000636466 KNSTRNQ9Y448 316 aa18.85■□□□□ 0.61
GABRB3-219ENST00000636466 C14orf37Q86TY3 774 aa18.84■□□□□ 0.61
GABRB3-219ENST00000636466 CC2D1BQ5T0F9 858 aaKnown RBP18.84■□□□□ 0.61
GABRB3-219ENST00000636466 ATAD2BQ9ULI0 1458 aa18.82■□□□□ 0.6
GABRB3-219ENST00000636466 TOP2AP11388 1531 aaKnown RBP18.82■□□□□ 0.6
GABRB3-219ENST00000636466 SMARCA2P51531 1590 aa18.81■□□□□ 0.6
GABRB3-219ENST00000636466 RAB3GAP2Q9H2M9 1393 aa18.81■□□□□ 0.6
GABRB3-219ENST00000636466 CADPSQ9ULU8 1353 aa18.8■□□□□ 0.6
GABRB3-219ENST00000636466 SETD5Q9C0A6 1442 aa18.79■□□□□ 0.6
GABRB3-219ENST00000636466 FHOD3Q2V2M9 1422 aa18.78■□□□□ 0.6
GABRB3-219ENST00000636466 ARID4BQ4LE39 1312 aaPredicted RBP18.78■□□□□ 0.6
GABRB3-219ENST00000636466 PKD2Q13563 968 aa18.78■□□□□ 0.6
GABRB3-219ENST00000636466 B4GALNT3Q6L9W6 998 aa18.77■□□□□ 0.6
GABRB3-219ENST00000636466 A0A0G2JS52 829 aa18.76■□□□□ 0.59
GABRB3-219ENST00000636466 HSPA5P11021 654 aaKnown RBP18.75■□□□□ 0.59
GABRB3-219ENST00000636466 EIF5BO60841 1220 aaKnown RBP18.74■□□□□ 0.59
GABRB3-219ENST00000636466 MLECQ14165 292 aa18.73■□□□□ 0.59
GABRB3-219ENST00000636466 SAFB2Q14151 953 aaKnown RBP eCLIP18.73■□□□□ 0.59
GABRB3-219ENST00000636466 PDS5BQ9NTI5 1447 aa18.71■□□□□ 0.59
GABRB3-219ENST00000636466 ARHGAP35Q9NRY4 1499 aa18.71■□□□□ 0.59
GABRB3-219ENST00000636466 GGT6Q6P531 493 aa18.71■□□□□ 0.59
GABRB3-219ENST00000636466 MPHOSPH9Q99550 1183 aa18.71■□□□□ 0.59
GABRB3-219ENST00000636466 LAS1LQ9Y4W2 734 aaKnown RBP18.7■□□□□ 0.58
GABRB3-219ENST00000636466 FRAT1Q92837 279 aaPredicted RBP18.69■□□□□ 0.58
GABRB3-219ENST00000636466 RGS3P49796 1198 aa18.68■□□□□ 0.58
GABRB3-219ENST00000636466 CDCA8Q53HL2 280 aa18.67■□□□□ 0.58
GABRB3-219ENST00000636466 POGKQ9P215 609 aa18.67■□□□□ 0.58
GABRB3-219ENST00000636466 SMARCA4P51532 1647 aa18.67■□□□□ 0.58
GABRB3-219ENST00000636466 HNRNPMP52272 730 aaKnown RBP eCLIP18.66■□□□□ 0.58
GABRB3-219ENST00000636466 CFAP53Q96M91 514 aa18.66■□□□□ 0.58
GABRB3-219ENST00000636466 L3MBTL2Q969R5 705 aa18.64■□□□□ 0.58
GABRB3-219ENST00000636466 U2SURPO15042 1029 aaKnown RBP18.64■□□□□ 0.57
GABRB3-219ENST00000636466 SOX12O15370 315 aa18.63■□□□□ 0.57
GABRB3-219ENST00000636466 JPH4Q96JJ6 628 aa18.62■□□□□ 0.57
GABRB3-219ENST00000636466 NUP155O75694 1391 aa18.62■□□□□ 0.57
GABRB3-219ENST00000636466 LMOD2Q6P5Q4 547 aa18.61■□□□□ 0.57
GABRB3-219ENST00000636466 MYH16Q9H6N6 1097 aa18.61■□□□□ 0.57
GABRB3-219ENST00000636466 FMN1Q68DA7 1419 aa18.61■□□□□ 0.57
GABRB3-219ENST00000636466 PPP4R2Q9NY27 417 aa18.61■□□□□ 0.57
GABRB3-219ENST00000636466 TIMELESSQ9UNS1 1208 aa18.61■□□□□ 0.57
GABRB3-219ENST00000636466 ANP32BQ92688 251 aaKnown RBP18.59■□□□□ 0.57
GABRB3-219ENST00000636466 TMF1P82094 1093 aa18.58■□□□□ 0.57
GABRB3-219ENST00000636466 FTSJ3Q8IY81 847 aaKnown RBP18.58■□□□□ 0.56
GABRB3-219ENST00000636466 STK26Q9P289 416 aa18.57■□□□□ 0.56
GABRB3-219ENST00000636466 MAPK8IP3Q9UPT6 1336 aa18.55■□□□□ 0.56
GABRB3-219ENST00000636466 CARMIL2Q6F5E8 1435 aa18.54■□□□□ 0.56
GABRB3-219ENST00000636466 SRPK2P78362 688 aaKnown RBP18.53■□□□□ 0.56
GABRB3-219ENST00000636466 FANCD2Q9BXW9 1451 aa18.52■□□□□ 0.56
GABRB3-219ENST00000636466 IGF1RP08069 1367 aa18.52■□□□□ 0.56
GABRB3-219ENST00000636466 NUTM2DQ5VT03 806 aaPredicted RBP18.52■□□□□ 0.55
GABRB3-219ENST00000636466 DHX57Q6P158 1386 aaKnown RBP18.52■□□□□ 0.55
GABRB3-219ENST00000636466 KIF3BO15066 747 aa18.51■□□□□ 0.55
GABRB3-219ENST00000636466 CCER2I3L3R5 266 aa18.51■□□□□ 0.55
GABRB3-219ENST00000636466 EFCAB2Q5VUJ9 269 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms