RNA–Protein interactions for RNA: ENST00000636048.1

ARHGEF9-222, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5 BASIC

Gene ARHGEF9, Length 5,059 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-222	ENST00000636048	SALL2	Q9Y467	1007 aa	Predicted RBP	12.22	□□□□□ -0.45
ARHGEF9-222	ENST00000636048	CEP164	Q9UPV0	1460 aa		12.21	□□□□□ -0.45
ARHGEF9-222	ENST00000636048	CCER2	I3L3R5	266 aa		12.21	□□□□□ -0.46
ARHGEF9-222	ENST00000636048	PLPPR3	Q6T4P5	718 aa		12.2	□□□□□ -0.46
ARHGEF9-222	ENST00000636048	ZNF777	Q9ULD5	760 aa	Predicted RBP	12.2	□□□□□ -0.46
ARHGEF9-222	ENST00000636048	LAS1L	Q9Y4W2	734 aa	Known RBP	12.19	□□□□□ -0.46
ARHGEF9-222	ENST00000636048	TMC1	Q8TDI8	760 aa		12.18	□□□□□ -0.46
ARHGEF9-222	ENST00000636048	WRN	Q14191	1432 aa	Predicted RBP eCLIP	12.18	□□□□□ -0.46
ARHGEF9-222	ENST00000636048	EIF4G2	P78344	907 aa	Known RBP eCLIP	12.17	□□□□□ -0.46
ARHGEF9-222	ENST00000636048	CHGA	P10645	457 aa	Known RBP	12.17	□□□□□ -0.46
ARHGEF9-222	ENST00000636048	SENP3-EIF4A1	A0A087X0R7	540 aa		12.15	□□□□□ -0.46
ARHGEF9-222	ENST00000636048	ARX	Q96QS3	562 aa		12.15	□□□□□ -0.46
ARHGEF9-222	ENST00000636048	ARID3C	A6NKF2	412 aa		12.15	□□□□□ -0.46
ARHGEF9-222	ENST00000636048	VPS8	Q8N3P4	1428 aa		12.15	□□□□□ -0.47
ARHGEF9-222	ENST00000636048	CECR2	Q9BXF3	1484 aa		12.14	□□□□□ -0.47
ARHGEF9-222	ENST00000636048	PPM1G	O15355	546 aa	Predicted RBP	12.14	□□□□□ -0.47
ARHGEF9-222	ENST00000636048	CCDC88B	A6NC98	1476 aa		12.13	□□□□□ -0.47
ARHGEF9-222	ENST00000636048	CCNB3	Q8WWL7	1395 aa		12.13	□□□□□ -0.47
ARHGEF9-222	ENST00000636048	DDRGK1	Q96HY6	314 aa		12.12	□□□□□ -0.47
ARHGEF9-222	ENST00000636048	CHIC2	Q9UKJ5	165 aa		12.12	□□□□□ -0.47
ARHGEF9-222	ENST00000636048	ABCC8	Q09428	1581 aa		12.11	□□□□□ -0.47
ARHGEF9-222	ENST00000636048	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	12.1	□□□□□ -0.47
ARHGEF9-222	ENST00000636048	ERICH6B	Q5W0A0	696 aa		12.09	□□□□□ -0.47
ARHGEF9-222	ENST00000636048	FANCI	Q9NVI1	1328 aa		12.09	□□□□□ -0.47
ARHGEF9-222	ENST00000636048	DHX57	Q6P158	1386 aa	Known RBP	12.08	□□□□□ -0.48
ARHGEF9-222	ENST00000636048	KANK4	Q5T7N3	995 aa	Predicted RBP	12.07	□□□□□ -0.48
ARHGEF9-222	ENST00000636048	TIMELESS	Q9UNS1	1208 aa		12.06	□□□□□ -0.48
ARHGEF9-222	ENST00000636048	UPF2	Q9HAU5	1272 aa	Known RBP	12.05	□□□□□ -0.48
ARHGEF9-222	ENST00000636048	MROH2B	Q7Z745	1585 aa		12.04	□□□□□ -0.48
ARHGEF9-222	ENST00000636048	RAB3GAP2	Q9H2M9	1393 aa		12.03	□□□□□ -0.48
ARHGEF9-222	ENST00000636048		A0A0G2JS52	829 aa		12.03	□□□□□ -0.48
ARHGEF9-222	ENST00000636048	MTUS2	Q5JR59	1369 aa		12.03	□□□□□ -0.48
ARHGEF9-222	ENST00000636048	RRP7BP	Q9NSQ0	103 aa		12.03	□□□□□ -0.48
ARHGEF9-222	ENST00000636048	IPO9	Q96P70	1041 aa	Known RBP	12.02	□□□□□ -0.48
ARHGEF9-222	ENST00000636048	SETD5	Q9C0A6	1442 aa		12.01	□□□□□ -0.49
ARHGEF9-222	ENST00000636048	ANP32B	Q92688	251 aa	Known RBP	12.01	□□□□□ -0.49
ARHGEF9-222	ENST00000636048	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	12	□□□□□ -0.49
ARHGEF9-222	ENST00000636048	PPP1R15A	O75807	674 aa	Predicted RBP	11.98	□□□□□ -0.49
ARHGEF9-222	ENST00000636048	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	11.97	□□□□□ -0.49
ARHGEF9-222	ENST00000636048	HSP90AA1	P07900	732 aa	Known RBP	11.97	□□□□□ -0.49
ARHGEF9-222	ENST00000636048	C14orf37	Q86TY3	774 aa		11.96	□□□□□ -0.49
ARHGEF9-222	ENST00000636048	TSPY4	P0CV99	314 aa		11.96	□□□□□ -0.49
ARHGEF9-222	ENST00000636048	TSPY10	P0CW01	314 aa		11.96	□□□□□ -0.49
ARHGEF9-222	ENST00000636048	NAP1L5	Q96NT1	182 aa	Predicted RBP	11.96	□□□□□ -0.5
ARHGEF9-222	ENST00000636048	HSPA5	P11021	654 aa	Known RBP	11.96	□□□□□ -0.5
ARHGEF9-222	ENST00000636048	BECN1	Q14457	450 aa		11.95	□□□□□ -0.5
ARHGEF9-222	ENST00000636048	HAP1	P54257	671 aa	Predicted RBP	11.94	□□□□□ -0.5
ARHGEF9-222	ENST00000636048	RUSC2	Q8N2Y8	1516 aa		11.94	□□□□□ -0.5
ARHGEF9-222	ENST00000636048	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.93	□□□□□ -0.5
ARHGEF9-222	ENST00000636048	KDM2A	Q9Y2K7	1162 aa		11.93	□□□□□ -0.5
ARHGEF9-222	ENST00000636048	PRKCSH	P14314	528 aa	Predicted RBP	11.93	□□□□□ -0.5
ARHGEF9-222	ENST00000636048	WIZ	O95785	1651 aa		11.93	□□□□□ -0.5
ARHGEF9-222	ENST00000636048	CDK11B	P21127	795 aa	Known RBP	11.92	□□□□□ -0.5
ARHGEF9-222	ENST00000636048	WDR43	Q15061	677 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
ARHGEF9-222	ENST00000636048	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
ARHGEF9-222	ENST00000636048	RGS3	P49796	1198 aa		11.91	□□□□□ -0.5
ARHGEF9-222	ENST00000636048	KIF27	Q86VH2	1401 aa		11.91	□□□□□ -0.5
ARHGEF9-222	ENST00000636048	TRIM44	Q96DX7	344 aa	Predicted RBP	11.91	□□□□□ -0.5
ARHGEF9-222	ENST00000636048	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.91	□□□□□ -0.5
ARHGEF9-222	ENST00000636048	TCERG1	O14776	1098 aa	Known RBP	11.89	□□□□□ -0.51
ARHGEF9-222	ENST00000636048	MSH5	O43196	834 aa		11.88	□□□□□ -0.51
ARHGEF9-222	ENST00000636048	ARID4B	Q4LE39	1312 aa	Predicted RBP	11.87	□□□□□ -0.51
ARHGEF9-222	ENST00000636048	USP35	Q9P2H5	1018 aa		11.87	□□□□□ -0.51
ARHGEF9-222	ENST00000636048	NUDC	Q9Y266	331 aa		11.87	□□□□□ -0.51
ARHGEF9-222	ENST00000636048	RAPGEF2	Q9Y4G8	1499 aa		11.86	□□□□□ -0.51
ARHGEF9-222	ENST00000636048	NACAD	O15069	1562 aa		11.86	□□□□□ -0.51
ARHGEF9-222	ENST00000636048	ZBTB7C	A1YPR0	619 aa		11.85	□□□□□ -0.51
ARHGEF9-222	ENST00000636048	CARD11	Q9BXL7	1154 aa		11.82	□□□□□ -0.52
ARHGEF9-222	ENST00000636048	MYH16	Q9H6N6	1097 aa		11.82	□□□□□ -0.52
ARHGEF9-222	ENST00000636048	BAZ1B	Q9UIG0	1483 aa	Known RBP	11.82	□□□□□ -0.52
ARHGEF9-222	ENST00000636048	RCAN3	Q9UKA8	241 aa		11.82	□□□□□ -0.52
ARHGEF9-222	ENST00000636048	L1TD1	Q5T7N2	865 aa	Known RBP	11.82	□□□□□ -0.52
ARHGEF9-222	ENST00000636048	FHAD1	B1AJZ9	1412 aa		11.82	□□□□□ -0.52
ARHGEF9-222	ENST00000636048	ZBED9	Q6R2W3	1325 aa		11.81	□□□□□ -0.52
ARHGEF9-222	ENST00000636048	PAK3	O75914	559 aa	Predicted RBP	11.81	□□□□□ -0.52
ARHGEF9-222	ENST00000636048	GSE1	Q14687	1217 aa		11.81	□□□□□ -0.52
ARHGEF9-222	ENST00000636048	IL27	Q8NEV9	243 aa		11.81	□□□□□ -0.52
ARHGEF9-222	ENST00000636048	PDE4A	P27815	886 aa		11.8	□□□□□ -0.52
ARHGEF9-222	ENST00000636048	ARHGAP35	Q9NRY4	1499 aa		11.79	□□□□□ -0.52
ARHGEF9-222	ENST00000636048	TOP2A	P11388	1531 aa	Known RBP	11.79	□□□□□ -0.52
ARHGEF9-222	ENST00000636048	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.79	□□□□□ -0.52
ARHGEF9-222	ENST00000636048	PLEKHG5	O94827	1062 aa		11.78	□□□□□ -0.52
ARHGEF9-222	ENST00000636048	PNN	Q9H307	717 aa	Known RBP	11.77	□□□□□ -0.52
ARHGEF9-222	ENST00000636048	FOXD1	Q16676	465 aa		11.77	□□□□□ -0.53
ARHGEF9-222	ENST00000636048	RSPH6A	Q9H0K4	717 aa		11.77	□□□□□ -0.53
ARHGEF9-222	ENST00000636048	PLEKHD1	A6NEE1	506 aa		11.76	□□□□□ -0.53
ARHGEF9-222	ENST00000636048	SLC4A3	P48751	1232 aa		11.76	□□□□□ -0.53
ARHGEF9-222	ENST00000636048	SLK	Q9H2G2	1235 aa	Predicted RBP	11.75	□□□□□ -0.53
ARHGEF9-222	ENST00000636048	CC2D1B	Q5T0F9	858 aa	Known RBP	11.75	□□□□□ -0.53
ARHGEF9-222	ENST00000636048	GOLGA6L22	H0YM25	854 aa		11.74	□□□□□ -0.53
ARHGEF9-222	ENST00000636048	NPHP1	O15259	732 aa		11.74	□□□□□ -0.53
ARHGEF9-222	ENST00000636048	L3MBTL2	Q969R5	705 aa		11.74	□□□□□ -0.53
ARHGEF9-222	ENST00000636048	SPRYD3	Q8NCJ5	442 aa		11.73	□□□□□ -0.53
ARHGEF9-222	ENST00000636048	EXOC6	Q8TAG9	804 aa		11.73	□□□□□ -0.53
ARHGEF9-222	ENST00000636048	RGL3	Q3MIN7	710 aa		11.73	□□□□□ -0.53
ARHGEF9-222	ENST00000636048	GZF1	Q9H116	711 aa	Predicted RBP	11.72	□□□□□ -0.53
ARHGEF9-222	ENST00000636048	CARMIL1	Q5VZK9	1371 aa		11.72	□□□□□ -0.53
ARHGEF9-222	ENST00000636048	NCL	P19338	710 aa	Known RBP	11.71	□□□□□ -0.53
ARHGEF9-222	ENST00000636048	TRH	P20396	242 aa	Predicted RBP	11.71	□□□□□ -0.53
ARHGEF9-222	ENST00000636048	KIF21B	O75037	1637 aa		11.71	□□□□□ -0.54

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