RNA–Protein interactions for RNA: ENST00000635914.1

UBE3A-224, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 9,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-224ENST00000635914 PABPN1Q86U42 306 aaKnown RBP eCLIP18.06■□□□□ 0.48
UBE3A-224ENST00000635914 FAM9BQ8IZU0 186 aa18.06■□□□□ 0.48
UBE3A-224ENST00000635914 NPHP1O15259 732 aa18.04■□□□□ 0.48
UBE3A-224ENST00000635914 ARID3CA6NKF2 412 aa18.04■□□□□ 0.48
UBE3A-224ENST00000635914 CDCA8Q53HL2 280 aa18.04■□□□□ 0.48
UBE3A-224ENST00000635914 CFAP53Q96M91 514 aa18.03■□□□□ 0.48
UBE3A-224ENST00000635914 CHAF1AQ13111 956 aaPredicted RBP18.03■□□□□ 0.48
UBE3A-224ENST00000635914 FTSJ3Q8IY81 847 aaKnown RBP18.01■□□□□ 0.47
UBE3A-224ENST00000635914 KAT6BQ8WYB5 2073 aa18■□□□□ 0.47
UBE3A-224ENST00000635914 TSPY4P0CV99 314 aa18■□□□□ 0.47
UBE3A-224ENST00000635914 TSPY10P0CW01 314 aa18■□□□□ 0.47
UBE3A-224ENST00000635914 P3H3Q8IVL6 736 aa17.99■□□□□ 0.47
UBE3A-224ENST00000635914 GOLGA2Q08379 1002 aa17.98■□□□□ 0.47
UBE3A-224ENST00000635914 EIF4G2P78344 907 aaKnown RBP eCLIP17.97■□□□□ 0.47
UBE3A-224ENST00000635914 TULP1O00294 542 aaPredicted RBP17.97■□□□□ 0.47
UBE3A-224ENST00000635914 ERICH6BQ5W0A0 696 aa17.95■□□□□ 0.46
UBE3A-224ENST00000635914 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.95■□□□□ 0.469e-8■■■□□ 14.6
UBE3A-224ENST00000635914 KIAA2012Q0VF49 1180 aa17.95■□□□□ 0.46
UBE3A-224ENST00000635914 MTUS2Q5JR59 1369 aa17.94■□□□□ 0.46
UBE3A-224ENST00000635914 MRS2Q9HD23 443 aa17.93■□□□□ 0.46
UBE3A-224ENST00000635914 RSF1Q96T23 1441 aaPredicted RBP17.93■□□□□ 0.46
UBE3A-224ENST00000635914 PNNQ9H307 717 aaKnown RBP17.92■□□□□ 0.46
UBE3A-224ENST00000635914 CFAP44Q96MT7 982 aa17.91■□□□□ 0.46
UBE3A-224ENST00000635914 ZBTB7CA1YPR0 619 aa17.91■□□□□ 0.46
UBE3A-224ENST00000635914 FGD1P98174 961 aa17.91■□□□□ 0.46
UBE3A-224ENST00000635914 MS4A1P11836 297 aa17.9■□□□□ 0.46
UBE3A-224ENST00000635914 CSRNP3Q8WYN3 585 aa17.89■□□□□ 0.45
UBE3A-224ENST00000635914 DCAF1Q9Y4B6 1507 aa17.89■□□□□ 0.45
UBE3A-224ENST00000635914 SALL2Q9Y467 1007 aaPredicted RBP17.87■□□□□ 0.45
UBE3A-224ENST00000635914 CLSTN1O94985 981 aa17.87■□□□□ 0.45
UBE3A-224ENST00000635914 KNSTRNQ9Y448 316 aa17.84■□□□□ 0.45
UBE3A-224ENST00000635914 USP35Q9P2H5 1018 aa17.83■□□□□ 0.44
UBE3A-224ENST00000635914 MAPK8IP3Q9UPT6 1336 aa17.82■□□□□ 0.44
UBE3A-224ENST00000635914 KCNJ4P48050 445 aa17.81■□□□□ 0.44
UBE3A-224ENST00000635914 GOLGA6L4A6NEF3 574 aa17.81■□□□□ 0.44
UBE3A-224ENST00000635914 DDX10Q13206 875 aaKnown RBP17.81■□□□□ 0.44
UBE3A-224ENST00000635914 OS9Q13438 667 aaPredicted RBP17.81■□□□□ 0.44
UBE3A-224ENST00000635914 MCCP23508 829 aa17.81■□□□□ 0.44
UBE3A-224ENST00000635914 RB1CC1Q8TDY2 1594 aa17.8■□□□□ 0.44
UBE3A-224ENST00000635914 PPM1GO15355 546 aaPredicted RBP17.79■□□□□ 0.44
UBE3A-224ENST00000635914 NOC3LQ8WTT2 800 aaKnown RBP17.79■□□□□ 0.44
UBE3A-224ENST00000635914 NUDCQ9Y266 331 aa17.78■□□□□ 0.44
UBE3A-224ENST00000635914 NCBP3Q53F19 620 aaKnown RBP17.78■□□□□ 0.44
UBE3A-224ENST00000635914 KDM2AQ9Y2K7 1162 aa17.77■□□□□ 0.44
UBE3A-224ENST00000635914 PLEKHG5O94827 1062 aa17.77■□□□□ 0.44
UBE3A-224ENST00000635914 PTMSP20962 102 aa17.77■□□□□ 0.43
UBE3A-224ENST00000635914 ARID4BQ4LE39 1312 aaPredicted RBP17.76■□□□□ 0.43
UBE3A-224ENST00000635914 CHMP7Q8WUX9 453 aaPredicted RBP17.76■□□□□ 0.43
UBE3A-224ENST00000635914 GNL2Q13823 731 aaKnown RBP17.75■□□□□ 0.43
UBE3A-224ENST00000635914 HSP90AB1P08238 724 aaKnown RBP17.75■□□□□ 0.43
UBE3A-224ENST00000635914 NAP1L5Q96NT1 182 aaPredicted RBP17.73■□□□□ 0.43
UBE3A-224ENST00000635914 CCDC34Q96HJ3 373 aa17.73■□□□□ 0.43
UBE3A-224ENST00000635914 MSNP26038 577 aaKnown RBP17.71■□□□□ 0.43
UBE3A-224ENST00000635914 TMX4Q9H1E5 349 aaPredicted RBP17.7■□□□□ 0.42
UBE3A-224ENST00000635914 NAP1L2Q9ULW6 460 aaPredicted RBP17.69■□□□□ 0.42
UBE3A-224ENST00000635914 KANK1Q14678 1352 aa17.68■□□□□ 0.42
UBE3A-224ENST00000635914 DRC7Q8IY82 874 aa17.68■□□□□ 0.42
UBE3A-224ENST00000635914 HSCBQ8IWL3 235 aa17.67■□□□□ 0.42
UBE3A-224ENST00000635914 HTATSF1O43719 755 aaKnown RBP17.67■□□□□ 0.42
UBE3A-224ENST00000635914 CHIC2Q9UKJ5 165 aa17.66■□□□□ 0.42
UBE3A-224ENST00000635914 HDGFP51858 240 aaKnown RBP17.66■□□□□ 0.42
UBE3A-224ENST00000635914 PLCB2Q00722 1185 aa17.65■□□□□ 0.42
UBE3A-224ENST00000635914 CHMP4AQ9BY43 222 aa17.65■□□□□ 0.42
UBE3A-224ENST00000635914 CLIP1P30622 1438 aa17.63■□□□□ 0.41
UBE3A-224ENST00000635914 PRM3Q9NNZ6 103 aa17.63■□□□□ 0.41
UBE3A-224ENST00000635914 EEA1Q15075 1411 aa17.62■□□□□ 0.41
UBE3A-224ENST00000635914 GOLGA6L1Q8N7Z2 621 aa17.62■□□□□ 0.41
UBE3A-224ENST00000635914 TPM4P67936 248 aa17.61■□□□□ 0.41
UBE3A-224ENST00000635914 POGKQ9P215 609 aa17.61■□□□□ 0.41
UBE3A-224ENST00000635914 SYAP1Q96A49 352 aaPredicted RBP17.6■□□□□ 0.41
UBE3A-224ENST00000635914 TPRNQ4KMQ1 711 aa17.59■□□□□ 0.41
UBE3A-224ENST00000635914 KIAA1211Q6ZU35 1233 aa17.59■□□□□ 0.41
UBE3A-224ENST00000635914 PLEKHD1A6NEE1 506 aa17.58■□□□□ 0.41
UBE3A-224ENST00000635914 ISY1Q9ULR0 285 aaKnown RBP17.58■□□□□ 0.41
UBE3A-224ENST00000635914 LAS1LQ9Y4W2 734 aaKnown RBP17.58■□□□□ 0.4
UBE3A-224ENST00000635914 GOLGA3Q08378 1498 aa17.58■□□□□ 0.4
UBE3A-224ENST00000635914 ZCCHC6Q5VYS8 1495 aaKnown RBP17.57■□□□□ 0.4
UBE3A-224ENST00000635914 ERCC6Q03468 1493 aa17.56■□□□□ 0.4
UBE3A-224ENST00000635914 GPATCH3Q96I76 525 aa17.56■□□□□ 0.4
UBE3A-224ENST00000635914 A0A0U1RQG5 324 aaPredicted RBP17.56■□□□□ 0.4
UBE3A-224ENST00000635914 CALD1Q05682 793 aaKnown RBP17.55■□□□□ 0.4
UBE3A-224ENST00000635914 LMOD2Q6P5Q4 547 aa17.54■□□□□ 0.4
UBE3A-224ENST00000635914 TAOK2Q9UL54 1235 aa17.51■□□□□ 0.39
UBE3A-224ENST00000635914 HDAC5Q9UQL6 1122 aa17.51■□□□□ 0.39
UBE3A-224ENST00000635914 CSPP1Q1MSJ5 1256 aa17.51■□□□□ 0.39
UBE3A-224ENST00000635914 GBP4Q96PP9 640 aa17.49■□□□□ 0.39
UBE3A-224ENST00000635914 CEP89Q96ST8 783 aa17.48■□□□□ 0.39
UBE3A-224ENST00000635914 RTF1Q92541 710 aaKnown RBP17.48■□□□□ 0.39
UBE3A-224ENST00000635914 PHF14O94880 888 aa17.47■□□□□ 0.39
UBE3A-224ENST00000635914 KRI1Q8N9T8 703 aaKnown RBP17.47■□□□□ 0.39
UBE3A-224ENST00000635914 CARD11Q9BXL7 1154 aa17.46■□□□□ 0.39
UBE3A-224ENST00000635914 NOP58Q9Y2X3 529 aaKnown RBP17.46■□□□□ 0.39
UBE3A-224ENST00000635914 IPO8O15397 1037 aaKnown RBP17.46■□□□□ 0.39
UBE3A-224ENST00000635914 FHAD1B1AJZ9 1412 aa17.46■□□□□ 0.38
UBE3A-224ENST00000635914 SETQ01105 290 aaPredicted RBP17.46■□□□□ 0.38
UBE3A-224ENST00000635914 EIF3AQ14152 1382 aaKnown RBP17.45■□□□□ 0.38
UBE3A-224ENST00000635914 SENP3Q9H4L4 574 aaPredicted RBP17.44■□□□□ 0.38
UBE3A-224ENST00000635914 IRX6P78412 446 aaPredicted RBP17.44■□□□□ 0.38
UBE3A-224ENST00000635914 CFDP1Q9UEE9 299 aaPredicted RBP17.43■□□□□ 0.38
UBE3A-224ENST00000635914 FRAT1Q92837 279 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms