RNA–Protein interactions for RNA: ENST00000634658.1

HCN1-202, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 1, humanhuman

TSL 3 BASIC

Gene HCN1, Length 4,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1-202ENST00000634658 STAG3Q9UJ98 1225 aa26.6■■□□□ 1.85
HCN1-202ENST00000634658 SCAF1Q9H7N4 1312 aaKnown RBP26.59■■□□□ 1.85
HCN1-202ENST00000634658 EIF4G2P78344 907 aaKnown RBP eCLIP26.59■■□□□ 1.85
HCN1-202ENST00000634658 SOGA1O94964 1423 aa26.57■■□□□ 1.84
HCN1-202ENST00000634658 NPM2Q86SE8 214 aaKnown RBP26.56■■□□□ 1.84
HCN1-202ENST00000634658 PLEKHD1A6NEE1 506 aa26.53■■□□□ 1.84
HCN1-202ENST00000634658 MROH2BQ7Z745 1585 aa26.49■■□□□ 1.83
HCN1-202ENST00000634658 KCNH8Q96L42 1107 aa26.48■■□□□ 1.83
HCN1-202ENST00000634658 CFDP1Q9UEE9 299 aaPredicted RBP26.44■■□□□ 1.82
HCN1-202ENST00000634658 CCDC136Q96JN2 1154 aa26.43■■□□□ 1.82
HCN1-202ENST00000634658 SIN3AQ96ST3 1273 aa26.41■■□□□ 1.82
HCN1-202ENST00000634658 IRX6P78412 446 aaPredicted RBP26.4■■□□□ 1.82
HCN1-202ENST00000634658 PLPPR3Q6T4P5 718 aa26.39■■□□□ 1.82
HCN1-202ENST00000634658 RGL3Q3MIN7 710 aa26.39■■□□□ 1.82
HCN1-202ENST00000634658 WDR43Q15061 677 aaKnown RBP eCLIP26.37■■□□□ 1.81
HCN1-202ENST00000634658 CCDC88BA6NC98 1476 aa26.36■■□□□ 1.81
HCN1-202ENST00000634658 CARMIL1Q5VZK9 1371 aa26.35■■□□□ 1.81
HCN1-202ENST00000634658 CCNB3Q8WWL7 1395 aa26.33■■□□□ 1.8
HCN1-202ENST00000634658 CUX2O14529 1486 aa26.32■■□□□ 1.8
HCN1-202ENST00000634658 ABCC8Q09428 1581 aa26.29■■□□□ 1.8
HCN1-202ENST00000634658 FHAD1B1AJZ9 1412 aa26.25■■□□□ 1.79
HCN1-202ENST00000634658 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.23■■□□□ 1.79
HCN1-202ENST00000634658 SENP3Q9H4L4 574 aaPredicted RBP26.22■■□□□ 1.79
HCN1-202ENST00000634658 SENP3-EIF4A1A0A087X0R7 540 aa26.22■■□□□ 1.79
HCN1-202ENST00000634658 VPS8Q8N3P4 1428 aa26.22■■□□□ 1.79
HCN1-202ENST00000634658 KANK4Q5T7N3 995 aaPredicted RBP26.19■■□□□ 1.78
HCN1-202ENST00000634658 CARD11Q9BXL7 1154 aa26.17■■□□□ 1.78
HCN1-202ENST00000634658 UPF2Q9HAU5 1272 aaKnown RBP26.16■■□□□ 1.78
HCN1-202ENST00000634658 HSP90AA1P07900 732 aaKnown RBP26.1■■□□□ 1.77
HCN1-202ENST00000634658 SUPT16HQ9Y5B9 1047 aaKnown RBP26.07■■□□□ 1.76
HCN1-202ENST00000634658 ERCC6Q03468 1493 aa26.06■■□□□ 1.76
HCN1-202ENST00000634658 WIZO95785 1651 aa26.03■■□□□ 1.76
HCN1-202ENST00000634658 KNSTRNQ9Y448 316 aa26.01■■□□□ 1.75
HCN1-202ENST00000634658 SMARCA2P51531 1590 aa26.01■■□□□ 1.75
HCN1-202ENST00000634658 TIMELESSQ9UNS1 1208 aa26.01■■□□□ 1.75
HCN1-202ENST00000634658 EIF4G1Q04637 1599 aaKnown RBP26■■□□□ 1.75
HCN1-202ENST00000634658 CDCA8Q53HL2 280 aa25.99■■□□□ 1.75
HCN1-202ENST00000634658 PPP1R15AO75807 674 aaPredicted RBP25.99■■□□□ 1.75
HCN1-202ENST00000634658 NBR1Q14596 966 aa25.99■■□□□ 1.75
HCN1-202ENST00000634658 TDRD9Q8NDG6 1382 aaKnown RBP25.98■■□□□ 1.75
HCN1-202ENST00000634658 SETD5Q9C0A6 1442 aa25.97■■□□□ 1.75
HCN1-202ENST00000634658 TOP2AP11388 1531 aaKnown RBP25.94■■□□□ 1.74
HCN1-202ENST00000634658 DCAF11Q8TEB1 546 aa25.91■■□□□ 1.74
HCN1-202ENST00000634658 ARHGAP35Q9NRY4 1499 aa25.89■■□□□ 1.73
HCN1-202ENST00000634658 RAB3GAP2Q9H2M9 1393 aa25.86■■□□□ 1.73
HCN1-202ENST00000634658 CFAP53Q96M91 514 aa25.86■■□□□ 1.73
HCN1-202ENST00000634658 FOXD1Q16676 465 aa25.85■■□□□ 1.73
HCN1-202ENST00000634658 NEUROD2Q15784 382 aa25.82■■□□□ 1.72
HCN1-202ENST00000634658 PDS5BQ9NTI5 1447 aa25.81■■□□□ 1.72
HCN1-202ENST00000634658 PPM1GO15355 546 aaPredicted RBP25.8■■□□□ 1.72
HCN1-202ENST00000634658 PLEKHG5O94827 1062 aa25.8■■□□□ 1.72
HCN1-202ENST00000634658 PKD2Q13563 968 aa25.79■■□□□ 1.72
HCN1-202ENST00000634658 CADPSQ9ULU8 1353 aa25.79■■□□□ 1.72
HCN1-202ENST00000634658 HSPA5P11021 654 aaKnown RBP25.79■■□□□ 1.72
HCN1-202ENST00000634658 CC2D1BQ5T0F9 858 aaKnown RBP25.79■■□□□ 1.72
HCN1-202ENST00000634658 FMN1Q68DA7 1419 aa25.79■■□□□ 1.72
HCN1-202ENST00000634658 RAPGEF2Q9Y4G8 1499 aa25.79■■□□□ 1.72
HCN1-202ENST00000634658 ANP32BQ92688 251 aaKnown RBP25.78■■□□□ 1.72
HCN1-202ENST00000634658 ATAD2BQ9ULI0 1458 aa25.77■■□□□ 1.72
HCN1-202ENST00000634658 MYH16Q9H6N6 1097 aa25.76■■□□□ 1.72
HCN1-202ENST00000634658 C14orf37Q86TY3 774 aa25.76■■□□□ 1.71
HCN1-202ENST00000634658 RUSC2Q8N2Y8 1516 aa25.75■■□□□ 1.71
HCN1-202ENST00000634658 ARID4BQ4LE39 1312 aaPredicted RBP25.74■■□□□ 1.71
HCN1-202ENST00000634658 TNNT2P45379 298 aaPredicted RBP25.74■■□□□ 1.71
HCN1-202ENST00000634658 PPP4R2Q9NY27 417 aa25.74■■□□□ 1.71
HCN1-202ENST00000634658 CCER2I3L3R5 266 aa25.73■■□□□ 1.71
HCN1-202ENST00000634658 MPHOSPH9Q99550 1183 aa25.72■■□□□ 1.71
HCN1-202ENST00000634658 TMF1P82094 1093 aa25.71■■□□□ 1.71
HCN1-202ENST00000634658 ARXQ96QS3 562 aa25.71■■□□□ 1.71
HCN1-202ENST00000634658 ZBTB7CA1YPR0 619 aa25.7■■□□□ 1.7
HCN1-202ENST00000634658 POGKQ9P215 609 aa25.7■■□□□ 1.7
HCN1-202ENST00000634658 FHOD3Q2V2M9 1422 aa25.7■■□□□ 1.7
HCN1-202ENST00000634658 CARMIL2Q6F5E8 1435 aa25.67■■□□□ 1.7
HCN1-202ENST00000634658 B4GALNT3Q6L9W6 998 aa25.67■■□□□ 1.7
HCN1-202ENST00000634658 NUDCQ9Y266 331 aa25.63■■□□□ 1.69
HCN1-202ENST00000634658 SMARCA4P51532 1647 aa25.63■■□□□ 1.69
HCN1-202ENST00000634658 MAPK8IP3Q9UPT6 1336 aa25.62■■□□□ 1.69
HCN1-202ENST00000634658 EIF5BO60841 1220 aaKnown RBP25.62■■□□□ 1.69
HCN1-202ENST00000634658 NUP155O75694 1391 aa25.61■■□□□ 1.69
HCN1-202ENST00000634658 FTSJ3Q8IY81 847 aaKnown RBP25.61■■□□□ 1.69
HCN1-202ENST00000634658 FRAT1Q92837 279 aaPredicted RBP25.6■■□□□ 1.69
HCN1-202ENST00000634658 KANK1Q14678 1352 aa25.58■■□□□ 1.69
HCN1-202ENST00000634658 DDRGK1Q96HY6 314 aa25.58■■□□□ 1.69
HCN1-202ENST00000634658 GGT6Q6P531 493 aa25.58■■□□□ 1.68
HCN1-202ENST00000634658 RGS3P49796 1198 aa25.57■■□□□ 1.68
HCN1-202ENST00000634658 L3MBTL2Q969R5 705 aa25.57■■□□□ 1.68
HCN1-202ENST00000634658 LAS1LQ9Y4W2 734 aaKnown RBP25.57■■□□□ 1.68
HCN1-202ENST00000634658 U2SURPO15042 1029 aaKnown RBP25.56■■□□□ 1.68
HCN1-202ENST00000634658 BECN1Q14457 450 aa25.56■■□□□ 1.68
HCN1-202ENST00000634658 EFCAB2Q5VUJ9 269 aa25.53■■□□□ 1.68
HCN1-202ENST00000634658 ANKRD30AQ9BXX3 1397 aa25.53■■□□□ 1.68
HCN1-202ENST00000634658 SAFB2Q14151 953 aaKnown RBP eCLIP25.51■■□□□ 1.67
HCN1-202ENST00000634658 A0A0G2JS52 829 aa25.51■■□□□ 1.67
HCN1-202ENST00000634658 MLECQ14165 292 aa25.49■■□□□ 1.67
HCN1-202ENST00000634658 DHX57Q6P158 1386 aaKnown RBP25.48■■□□□ 1.67
HCN1-202ENST00000634658 HNRNPMP52272 730 aaKnown RBP eCLIP25.47■■□□□ 1.67
HCN1-202ENST00000634658 JPH4Q96JJ6 628 aa25.47■■□□□ 1.67
HCN1-202ENST00000634658 SRPK2P78362 688 aaKnown RBP25.46■■□□□ 1.67
HCN1-202ENST00000634658 ANP32EQ9BTT0 268 aa25.46■■□□□ 1.67
HCN1-202ENST00000634658 MORC1Q86VD1 984 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms