RNA–Protein interactions for RNA: ENST00000630866.1

SPTAN1-223, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTAN1, Length 7,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-223ENST00000630866 TULP1O00294 542 aaPredicted RBP11.57□□□□□ -0.56
SPTAN1-223ENST00000630866 KIF27Q86VH2 1401 aa11.56□□□□□ -0.56
SPTAN1-223ENST00000630866 SALL2Q9Y467 1007 aaPredicted RBP11.56□□□□□ -0.56
SPTAN1-223ENST00000630866 MLECQ14165 292 aa11.55□□□□□ -0.56
SPTAN1-223ENST00000630866 RGL3Q3MIN7 710 aa11.55□□□□□ -0.56
SPTAN1-223ENST00000630866 ANP32BQ92688 251 aaKnown RBP11.55□□□□□ -0.56
SPTAN1-223ENST00000630866 CLIP1P30622 1438 aa11.55□□□□□ -0.56
SPTAN1-223ENST00000630866 ARXQ96QS3 562 aa11.54□□□□□ -0.56
SPTAN1-223ENST00000630866 WRNQ14191 1432 aaPredicted RBP eCLIP11.53□□□□□ -0.56
SPTAN1-223ENST00000630866 FAM9BQ8IZU0 186 aa11.52□□□□□ -0.56
SPTAN1-223ENST00000630866 ACIN1Q9UKV3 1341 aaKnown RBP11.5□□□□□ -0.57
SPTAN1-223ENST00000630866 HSP90AA1P07900 732 aaKnown RBP11.5□□□□□ -0.57
SPTAN1-223ENST00000630866 HDGFP51858 240 aaKnown RBP11.5□□□□□ -0.57
SPTAN1-223ENST00000630866 POGKQ9P215 609 aa11.5□□□□□ -0.57
SPTAN1-223ENST00000630866 EIF4G1Q04637 1599 aaKnown RBP11.49□□□□□ -0.57
SPTAN1-223ENST00000630866 NPHP1O15259 732 aa11.48□□□□□ -0.57
SPTAN1-223ENST00000630866 DDX10Q13206 875 aaKnown RBP11.48□□□□□ -0.57
SPTAN1-223ENST00000630866 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.48□□□□□ -0.57
SPTAN1-223ENST00000630866 PPM1GO15355 546 aaPredicted RBP11.47□□□□□ -0.57
SPTAN1-223ENST00000630866 BAZ1AQ9NRL2 1556 aaPredicted RBP11.47□□□□□ -0.57
SPTAN1-223ENST00000630866 EEA1Q15075 1411 aa11.47□□□□□ -0.57
SPTAN1-223ENST00000630866 GOLGA3Q08378 1498 aa11.47□□□□□ -0.57
SPTAN1-223ENST00000630866 PDS5BQ9NTI5 1447 aa11.47□□□□□ -0.57
SPTAN1-223ENST00000630866 UPF2Q9HAU5 1272 aaKnown RBP11.46□□□□□ -0.57
SPTAN1-223ENST00000630866 HNRNPUQ00839 825 aaKnown RBP eCLIP11.46□□□□□ -0.58
SPTAN1-223ENST00000630866 MYH16Q9H6N6 1097 aa11.46□□□□□ -0.58
SPTAN1-223ENST00000630866 CDCA8Q53HL2 280 aa11.45□□□□□ -0.58
SPTAN1-223ENST00000630866 KANK1Q14678 1352 aa11.44□□□□□ -0.58
SPTAN1-223ENST00000630866 CFAP53Q96M91 514 aa11.44□□□□□ -0.58
SPTAN1-223ENST00000630866 EIF4G2P78344 907 aaKnown RBP eCLIP11.43□□□□□ -0.58
SPTAN1-223ENST00000630866 CDK11BP21127 795 aaKnown RBP11.42□□□□□ -0.58
SPTAN1-223ENST00000630866 CCNB3Q8WWL7 1395 aa11.41□□□□□ -0.58
SPTAN1-223ENST00000630866 ANP32AP39687 249 aaKnown RBP11.41□□□□□ -0.58
SPTAN1-223ENST00000630866 DCAF1Q9Y4B6 1507 aa11.4□□□□□ -0.58
SPTAN1-223ENST00000630866 CARMIL2Q6F5E8 1435 aa11.4□□□□□ -0.58
SPTAN1-223ENST00000630866 MRS2Q9HD23 443 aa11.39□□□□□ -0.59
SPTAN1-223ENST00000630866 KRI1Q8N9T8 703 aaKnown RBP11.39□□□□□ -0.59
SPTAN1-223ENST00000630866 CUX2O14529 1486 aa11.39□□□□□ -0.59
SPTAN1-223ENST00000630866 GGT6Q6P531 493 aa11.39□□□□□ -0.59
SPTAN1-223ENST00000630866 KNSTRNQ9Y448 316 aa11.39□□□□□ -0.59
SPTAN1-223ENST00000630866 CECR2Q9BXF3 1484 aa11.39□□□□□ -0.59
SPTAN1-223ENST00000630866 CARMIL1Q5VZK9 1371 aa11.37□□□□□ -0.59
SPTAN1-223ENST00000630866 CEP164Q9UPV0 1460 aa11.37□□□□□ -0.59
SPTAN1-223ENST00000630866 CARD11Q9BXL7 1154 aa11.36□□□□□ -0.59
SPTAN1-223ENST00000630866 SMARCA2P51531 1590 aa11.35□□□□□ -0.59
SPTAN1-223ENST00000630866 HIRIP3Q9BW71 556 aaPredicted RBP11.34□□□□□ -0.59
SPTAN1-223ENST00000630866 GTF3C3Q9Y5Q9 886 aa11.34□□□□□ -0.59
SPTAN1-223ENST00000630866 CEP162Q5TB80 1403 aa11.34□□□□□ -0.59
SPTAN1-223ENST00000630866 NUDCQ9Y266 331 aa11.33□□□□□ -0.6
SPTAN1-223ENST00000630866 FHAD1B1AJZ9 1412 aa11.33□□□□□ -0.6
SPTAN1-223ENST00000630866 MAPK8IP3Q9UPT6 1336 aa11.33□□□□□ -0.6
SPTAN1-223ENST00000630866 SOGA1O94964 1423 aa11.32□□□□□ -0.6
SPTAN1-223ENST00000630866 LAS1LQ9Y4W2 734 aaKnown RBP11.32□□□□□ -0.6
SPTAN1-223ENST00000630866 SOX12O15370 315 aa11.31□□□□□ -0.6
SPTAN1-223ENST00000630866 SRPK2P78362 688 aaKnown RBP11.3□□□□□ -0.6
SPTAN1-223ENST00000630866 DCAF8L1A6NGE4 600 aa11.3□□□□□ -0.6
SPTAN1-223ENST00000630866 CCDC136Q96JN2 1154 aa11.29□□□□□ -0.6
SPTAN1-223ENST00000630866 EFCAB2Q5VUJ9 269 aa11.29□□□□□ -0.6
SPTAN1-223ENST00000630866 TNNT2P45379 298 aaPredicted RBP11.29□□□□□ -0.6
SPTAN1-223ENST00000630866 TDRD9Q8NDG6 1382 aaKnown RBP11.28□□□□□ -0.6
SPTAN1-223ENST00000630866 FKBP8Q14318 412 aa11.28□□□□□ -0.6
SPTAN1-223ENST00000630866 CCDC9Q9Y3X0 531 aaKnown RBP11.28□□□□□ -0.6
SPTAN1-223ENST00000630866 SAFB2Q14151 953 aaKnown RBP eCLIP11.28□□□□□ -0.6
SPTAN1-223ENST00000630866 PAK3O75914 559 aaPredicted RBP11.27□□□□□ -0.6
SPTAN1-223ENST00000630866 CYB5RLQ6IPT4 315 aa11.27□□□□□ -0.61
SPTAN1-223ENST00000630866 STK26Q9P289 416 aa11.27□□□□□ -0.61
SPTAN1-223ENST00000630866 EID1Q9Y6B2 187 aa11.27□□□□□ -0.61
SPTAN1-223ENST00000630866 GOLGA2Q08379 1002 aa11.26□□□□□ -0.61
SPTAN1-223ENST00000630866 PNNQ9H307 717 aaKnown RBP11.26□□□□□ -0.61
SPTAN1-223ENST00000630866 NEUROD2Q15784 382 aa11.26□□□□□ -0.61
SPTAN1-223ENST00000630866 U2SURPO15042 1029 aaKnown RBP11.25□□□□□ -0.61
SPTAN1-223ENST00000630866 OSCARQ8IYS5 282 aa11.25□□□□□ -0.61
SPTAN1-223ENST00000630866 PHF23Q9BUL5 403 aaPredicted RBP11.25□□□□□ -0.61
SPTAN1-223ENST00000630866 DCAF11Q8TEB1 546 aa11.25□□□□□ -0.61
SPTAN1-223ENST00000630866 TNIKQ9UKE5 1360 aa11.24□□□□□ -0.61
SPTAN1-223ENST00000630866 CSB-PGBD3P0DP91 1061 aa11.24□□□□□ -0.61
SPTAN1-223ENST00000630866 FTSJ3Q8IY81 847 aaKnown RBP11.24□□□□□ -0.61
SPTAN1-223ENST00000630866 TMF1P82094 1093 aa11.22□□□□□ -0.61
SPTAN1-223ENST00000630866 OS9Q13438 667 aaPredicted RBP11.2□□□□□ -0.62
SPTAN1-223ENST00000630866 MEX3CQ5U5Q3 659 aaKnown RBP11.2□□□□□ -0.62
SPTAN1-223ENST00000630866 HDGFL2Q7Z4V5 671 aaPredicted RBP11.2□□□□□ -0.62
SPTAN1-223ENST00000630866 PRM3Q9NNZ6 103 aa11.19□□□□□ -0.62
SPTAN1-223ENST00000630866 KIF3BO15066 747 aa11.19□□□□□ -0.62
SPTAN1-223ENST00000630866 CASC1Q6TDU7 716 aa11.19□□□□□ -0.62
SPTAN1-223ENST00000630866 CC2D1BQ5T0F9 858 aaKnown RBP11.18□□□□□ -0.62
SPTAN1-223ENST00000630866 RTF1Q92541 710 aaKnown RBP11.18□□□□□ -0.62
SPTAN1-223ENST00000630866 TMX4Q9H1E5 349 aaPredicted RBP11.18□□□□□ -0.62
SPTAN1-223ENST00000630866 CADPSQ9ULU8 1353 aa11.18□□□□□ -0.62
SPTAN1-223ENST00000630866 JPH4Q96JJ6 628 aa11.18□□□□□ -0.62
SPTAN1-223ENST00000630866 WASHC2CQ9Y4E1 1318 aa11.18□□□□□ -0.62
SPTAN1-223ENST00000630866 CCDC88BA6NC98 1476 aa11.17□□□□□ -0.62
SPTAN1-223ENST00000630866 FOXD1Q16676 465 aa11.17□□□□□ -0.62
SPTAN1-223ENST00000630866 SPAG9O60271 1321 aaKnown RBP11.16□□□□□ -0.62
SPTAN1-223ENST00000630866 MORC1Q86VD1 984 aa11.15□□□□□ -0.62
SPTAN1-223ENST00000630866 ARHGAP35Q9NRY4 1499 aa11.15□□□□□ -0.62
SPTAN1-223ENST00000630866 FMN1Q68DA7 1419 aa11.14□□□□□ -0.63
SPTAN1-223ENST00000630866 MROH2BQ7Z745 1585 aa11.14□□□□□ -0.63
SPTAN1-223ENST00000630866 SENP3-EIF4A1A0A087X0R7 540 aa11.14□□□□□ -0.63
SPTAN1-223ENST00000630866 CHMP4BQ9H444 224 aaKnown RBP11.14□□□□□ -0.63
SPTAN1-223ENST00000630866 ZNF330Q9Y3S2 320 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms