RNA–Protein interactions for RNA: ENST00000630866.1

SPTAN1-223, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5 BASIC

Gene SPTAN1, Length 7,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-223	ENST00000630866	TULP1	O00294	542 aa	Predicted RBP	11.57	□□□□□ -0.56
SPTAN1-223	ENST00000630866	KIF27	Q86VH2	1401 aa		11.56	□□□□□ -0.56
SPTAN1-223	ENST00000630866	SALL2	Q9Y467	1007 aa	Predicted RBP	11.56	□□□□□ -0.56
SPTAN1-223	ENST00000630866	MLEC	Q14165	292 aa		11.55	□□□□□ -0.56
SPTAN1-223	ENST00000630866	RGL3	Q3MIN7	710 aa		11.55	□□□□□ -0.56
SPTAN1-223	ENST00000630866	ANP32B	Q92688	251 aa	Known RBP	11.55	□□□□□ -0.56
SPTAN1-223	ENST00000630866	CLIP1	P30622	1438 aa		11.55	□□□□□ -0.56
SPTAN1-223	ENST00000630866	ARX	Q96QS3	562 aa		11.54	□□□□□ -0.56
SPTAN1-223	ENST00000630866	WRN	Q14191	1432 aa	Predicted RBP eCLIP	11.53	□□□□□ -0.56
SPTAN1-223	ENST00000630866	FAM9B	Q8IZU0	186 aa		11.52	□□□□□ -0.56
SPTAN1-223	ENST00000630866	ACIN1	Q9UKV3	1341 aa	Known RBP	11.5	□□□□□ -0.57
SPTAN1-223	ENST00000630866	HSP90AA1	P07900	732 aa	Known RBP	11.5	□□□□□ -0.57
SPTAN1-223	ENST00000630866	HDGF	P51858	240 aa	Known RBP	11.5	□□□□□ -0.57
SPTAN1-223	ENST00000630866	POGK	Q9P215	609 aa		11.5	□□□□□ -0.57
SPTAN1-223	ENST00000630866	EIF4G1	Q04637	1599 aa	Known RBP	11.49	□□□□□ -0.57
SPTAN1-223	ENST00000630866	NPHP1	O15259	732 aa		11.48	□□□□□ -0.57
SPTAN1-223	ENST00000630866	DDX10	Q13206	875 aa	Known RBP	11.48	□□□□□ -0.57
SPTAN1-223	ENST00000630866	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.48	□□□□□ -0.57
SPTAN1-223	ENST00000630866	PPM1G	O15355	546 aa	Predicted RBP	11.47	□□□□□ -0.57
SPTAN1-223	ENST00000630866	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	11.47	□□□□□ -0.57
SPTAN1-223	ENST00000630866	EEA1	Q15075	1411 aa		11.47	□□□□□ -0.57
SPTAN1-223	ENST00000630866	GOLGA3	Q08378	1498 aa		11.47	□□□□□ -0.57
SPTAN1-223	ENST00000630866	PDS5B	Q9NTI5	1447 aa		11.47	□□□□□ -0.57
SPTAN1-223	ENST00000630866	UPF2	Q9HAU5	1272 aa	Known RBP	11.46	□□□□□ -0.57
SPTAN1-223	ENST00000630866	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.46	□□□□□ -0.58
SPTAN1-223	ENST00000630866	MYH16	Q9H6N6	1097 aa		11.46	□□□□□ -0.58
SPTAN1-223	ENST00000630866	CDCA8	Q53HL2	280 aa		11.45	□□□□□ -0.58
SPTAN1-223	ENST00000630866	KANK1	Q14678	1352 aa		11.44	□□□□□ -0.58
SPTAN1-223	ENST00000630866	CFAP53	Q96M91	514 aa		11.44	□□□□□ -0.58
SPTAN1-223	ENST00000630866	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
SPTAN1-223	ENST00000630866	CDK11B	P21127	795 aa	Known RBP	11.42	□□□□□ -0.58
SPTAN1-223	ENST00000630866	CCNB3	Q8WWL7	1395 aa		11.41	□□□□□ -0.58
SPTAN1-223	ENST00000630866	ANP32A	P39687	249 aa	Known RBP	11.41	□□□□□ -0.58
SPTAN1-223	ENST00000630866	DCAF1	Q9Y4B6	1507 aa		11.4	□□□□□ -0.58
SPTAN1-223	ENST00000630866	CARMIL2	Q6F5E8	1435 aa		11.4	□□□□□ -0.58
SPTAN1-223	ENST00000630866	MRS2	Q9HD23	443 aa		11.39	□□□□□ -0.59
SPTAN1-223	ENST00000630866	KRI1	Q8N9T8	703 aa	Known RBP	11.39	□□□□□ -0.59
SPTAN1-223	ENST00000630866	CUX2	O14529	1486 aa		11.39	□□□□□ -0.59
SPTAN1-223	ENST00000630866	GGT6	Q6P531	493 aa		11.39	□□□□□ -0.59
SPTAN1-223	ENST00000630866	KNSTRN	Q9Y448	316 aa		11.39	□□□□□ -0.59
SPTAN1-223	ENST00000630866	CECR2	Q9BXF3	1484 aa		11.39	□□□□□ -0.59
SPTAN1-223	ENST00000630866	CARMIL1	Q5VZK9	1371 aa		11.37	□□□□□ -0.59
SPTAN1-223	ENST00000630866	CEP164	Q9UPV0	1460 aa		11.37	□□□□□ -0.59
SPTAN1-223	ENST00000630866	CARD11	Q9BXL7	1154 aa		11.36	□□□□□ -0.59
SPTAN1-223	ENST00000630866	SMARCA2	P51531	1590 aa		11.35	□□□□□ -0.59
SPTAN1-223	ENST00000630866	HIRIP3	Q9BW71	556 aa	Predicted RBP	11.34	□□□□□ -0.59
SPTAN1-223	ENST00000630866	GTF3C3	Q9Y5Q9	886 aa		11.34	□□□□□ -0.59
SPTAN1-223	ENST00000630866	CEP162	Q5TB80	1403 aa		11.34	□□□□□ -0.59
SPTAN1-223	ENST00000630866	NUDC	Q9Y266	331 aa		11.33	□□□□□ -0.6
SPTAN1-223	ENST00000630866	FHAD1	B1AJZ9	1412 aa		11.33	□□□□□ -0.6
SPTAN1-223	ENST00000630866	MAPK8IP3	Q9UPT6	1336 aa		11.33	□□□□□ -0.6
SPTAN1-223	ENST00000630866	SOGA1	O94964	1423 aa		11.32	□□□□□ -0.6
SPTAN1-223	ENST00000630866	LAS1L	Q9Y4W2	734 aa	Known RBP	11.32	□□□□□ -0.6
SPTAN1-223	ENST00000630866	SOX12	O15370	315 aa		11.31	□□□□□ -0.6
SPTAN1-223	ENST00000630866	SRPK2	P78362	688 aa	Known RBP	11.3	□□□□□ -0.6
SPTAN1-223	ENST00000630866	DCAF8L1	A6NGE4	600 aa		11.3	□□□□□ -0.6
SPTAN1-223	ENST00000630866	CCDC136	Q96JN2	1154 aa		11.29	□□□□□ -0.6
SPTAN1-223	ENST00000630866	EFCAB2	Q5VUJ9	269 aa		11.29	□□□□□ -0.6
SPTAN1-223	ENST00000630866	TNNT2	P45379	298 aa	Predicted RBP	11.29	□□□□□ -0.6
SPTAN1-223	ENST00000630866	TDRD9	Q8NDG6	1382 aa	Known RBP	11.28	□□□□□ -0.6
SPTAN1-223	ENST00000630866	FKBP8	Q14318	412 aa		11.28	□□□□□ -0.6
SPTAN1-223	ENST00000630866	CCDC9	Q9Y3X0	531 aa	Known RBP	11.28	□□□□□ -0.6
SPTAN1-223	ENST00000630866	SAFB2	Q14151	953 aa	Known RBP eCLIP	11.28	□□□□□ -0.6
SPTAN1-223	ENST00000630866	PAK3	O75914	559 aa	Predicted RBP	11.27	□□□□□ -0.6
SPTAN1-223	ENST00000630866	CYB5RL	Q6IPT4	315 aa		11.27	□□□□□ -0.61
SPTAN1-223	ENST00000630866	STK26	Q9P289	416 aa		11.27	□□□□□ -0.61
SPTAN1-223	ENST00000630866	EID1	Q9Y6B2	187 aa		11.27	□□□□□ -0.61
SPTAN1-223	ENST00000630866	GOLGA2	Q08379	1002 aa		11.26	□□□□□ -0.61
SPTAN1-223	ENST00000630866	PNN	Q9H307	717 aa	Known RBP	11.26	□□□□□ -0.61
SPTAN1-223	ENST00000630866	NEUROD2	Q15784	382 aa		11.26	□□□□□ -0.61
SPTAN1-223	ENST00000630866	U2SURP	O15042	1029 aa	Known RBP	11.25	□□□□□ -0.61
SPTAN1-223	ENST00000630866	OSCAR	Q8IYS5	282 aa		11.25	□□□□□ -0.61
SPTAN1-223	ENST00000630866	PHF23	Q9BUL5	403 aa	Predicted RBP	11.25	□□□□□ -0.61
SPTAN1-223	ENST00000630866	DCAF11	Q8TEB1	546 aa		11.25	□□□□□ -0.61
SPTAN1-223	ENST00000630866	TNIK	Q9UKE5	1360 aa		11.24	□□□□□ -0.61
SPTAN1-223	ENST00000630866	CSB-PGBD3	P0DP91	1061 aa		11.24	□□□□□ -0.61
SPTAN1-223	ENST00000630866	FTSJ3	Q8IY81	847 aa	Known RBP	11.24	□□□□□ -0.61
SPTAN1-223	ENST00000630866	TMF1	P82094	1093 aa		11.22	□□□□□ -0.61
SPTAN1-223	ENST00000630866	OS9	Q13438	667 aa	Predicted RBP	11.2	□□□□□ -0.62
SPTAN1-223	ENST00000630866	MEX3C	Q5U5Q3	659 aa	Known RBP	11.2	□□□□□ -0.62
SPTAN1-223	ENST00000630866	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.2	□□□□□ -0.62
SPTAN1-223	ENST00000630866	PRM3	Q9NNZ6	103 aa		11.19	□□□□□ -0.62
SPTAN1-223	ENST00000630866	KIF3B	O15066	747 aa		11.19	□□□□□ -0.62
SPTAN1-223	ENST00000630866	CASC1	Q6TDU7	716 aa		11.19	□□□□□ -0.62
SPTAN1-223	ENST00000630866	CC2D1B	Q5T0F9	858 aa	Known RBP	11.18	□□□□□ -0.62
SPTAN1-223	ENST00000630866	RTF1	Q92541	710 aa	Known RBP	11.18	□□□□□ -0.62
SPTAN1-223	ENST00000630866	TMX4	Q9H1E5	349 aa	Predicted RBP	11.18	□□□□□ -0.62
SPTAN1-223	ENST00000630866	CADPS	Q9ULU8	1353 aa		11.18	□□□□□ -0.62
SPTAN1-223	ENST00000630866	JPH4	Q96JJ6	628 aa		11.18	□□□□□ -0.62
SPTAN1-223	ENST00000630866	WASHC2C	Q9Y4E1	1318 aa		11.18	□□□□□ -0.62
SPTAN1-223	ENST00000630866	CCDC88B	A6NC98	1476 aa		11.17	□□□□□ -0.62
SPTAN1-223	ENST00000630866	FOXD1	Q16676	465 aa		11.17	□□□□□ -0.62
SPTAN1-223	ENST00000630866	SPAG9	O60271	1321 aa	Known RBP	11.16	□□□□□ -0.62
SPTAN1-223	ENST00000630866	MORC1	Q86VD1	984 aa		11.15	□□□□□ -0.62
SPTAN1-223	ENST00000630866	ARHGAP35	Q9NRY4	1499 aa		11.15	□□□□□ -0.62
SPTAN1-223	ENST00000630866	FMN1	Q68DA7	1419 aa		11.14	□□□□□ -0.63
SPTAN1-223	ENST00000630866	MROH2B	Q7Z745	1585 aa		11.14	□□□□□ -0.63
SPTAN1-223	ENST00000630866	SENP3-EIF4A1	A0A087X0R7	540 aa		11.14	□□□□□ -0.63
SPTAN1-223	ENST00000630866	CHMP4B	Q9H444	224 aa	Known RBP	11.14	□□□□□ -0.63
SPTAN1-223	ENST00000630866	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms