RNA–Protein interactions for RNA: ENST00000627622.1

CHD2-212, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene CHD2, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-212ENST00000627622 FHAD1B1AJZ9 1412 aa15.61■□□□□ 0.09
CHD2-212ENST00000627622 MSH5O43196 834 aa15.61■□□□□ 0.09
CHD2-212ENST00000627622 ERICH3Q5RHP9 1530 aa15.59■□□□□ 0.09
CHD2-212ENST00000627622 KIF13AQ9H1H9 1805 aa15.54■□□□□ 0.08
CHD2-212ENST00000627622 PRG4Q92954 1404 aaPredicted RBP15.51■□□□□ 0.07
CHD2-212ENST00000627622 JPH4Q96JJ6 628 aa15.49■□□□□ 0.07
CHD2-212ENST00000627622 RUSC2Q8N2Y8 1516 aa15.46■□□□□ 0.06
CHD2-212ENST00000627622 NPM1P06748 294 aaKnown RBP eCLIP15.4■□□□□ 0.06
CHD2-212ENST00000627622 ABCC10Q5T3U5 1492 aa15.38■□□□□ 0.05
CHD2-212ENST00000627622 FAM69CQ0P6D2 419 aa15.38■□□□□ 0.05
CHD2-212ENST00000627622 MAPKBP1O60336 1514 aa15.38■□□□□ 0.05
CHD2-212ENST00000627622 ADCY10Q96PN6 1610 aa15.37■□□□□ 0.05
CHD2-212ENST00000627622 KIAA0586Q9BVV6 1533 aa15.36■□□□□ 0.05
CHD2-212ENST00000627622 CUL7Q14999 1698 aa15.35■□□□□ 0.05
CHD2-212ENST00000627622 DIP2BQ9P265 1576 aa15.35■□□□□ 0.05
CHD2-212ENST00000627622 IGF1RP08069 1367 aa15.34■□□□□ 0.05
CHD2-212ENST00000627622 KIF27Q86VH2 1401 aa15.32■□□□□ 0.04
CHD2-212ENST00000627622 TSPOAP1O95153 1857 aa15.31■□□□□ 0.04
CHD2-212ENST00000627622 KDM6BO15054 1643 aa15.28■□□□□ 0.04
CHD2-212ENST00000627622 PTPRGP23470 1445 aa15.24■□□□□ 0.03
CHD2-212ENST00000627622 CARMIL1Q5VZK9 1371 aa15.24■□□□□ 0.03
CHD2-212ENST00000627622 CARMIL2Q6F5E8 1435 aa15.22■□□□□ 0.03
CHD2-212ENST00000627622 TNIKQ9UKE5 1360 aa15.2■□□□□ 0.02
CHD2-212ENST00000627622 TTBK1Q5TCY1 1321 aaPredicted RBP15.2■□□□□ 0.02
CHD2-212ENST00000627622 ABCC2Q92887 1545 aa15.2■□□□□ 0.02
CHD2-212ENST00000627622 IQGAP2Q13576 1575 aa15.19■□□□□ 0.02
CHD2-212ENST00000627622 KDM4FA0A1W2PPD8 638 aa15.18■□□□□ 0.02
CHD2-212ENST00000627622 PLB1Q6P1J6 1458 aa15.15■□□□□ 0.02
CHD2-212ENST00000627622 PPRC1Q5VV67 1664 aaKnown RBP15.15■□□□□ 0.02
CHD2-212ENST00000627622 ASXL2Q76L83 1435 aa15.15■□□□□ 0.02
CHD2-212ENST00000627622 GLI2P10070 1586 aa15.15■□□□□ 0.02
CHD2-212ENST00000627622 UHRF1BP1LA0JNW5 1464 aa15.15■□□□□ 0.02
CHD2-212ENST00000627622 UACAQ9BZF9 1416 aa15.12■□□□□ 0.01
CHD2-212ENST00000627622 DISP1Q96F81 1524 aa15.12■□□□□ 0.01
CHD2-212ENST00000627622 RAPGEF2Q9Y4G8 1499 aa15.08■□□□□ 0.01
CHD2-212ENST00000627622 UGGT2Q9NYU1 1516 aa15.08■□□□□ 0.01
CHD2-212ENST00000627622 KDM5BQ9UGL1 1544 aa15.08■□□□□ 0.01
CHD2-212ENST00000627622 MAP3K4Q9Y6R4 1608 aa15.08■□□□□ 0
CHD2-212ENST00000627622 ZCCHC11Q5TAX3 1644 aaKnown RBP15.07■□□□□ 0
CHD2-212ENST00000627622 EPRSP07814 1512 aaKnown RBP15.07■□□□□ 0
CHD2-212ENST00000627622 KIAA0556O60303 1618 aa15.06■□□□□ 0
CHD2-212ENST00000627622 TEX14Q8IWB6 1497 aa15.03■□□□□ -0
CHD2-212ENST00000627622 COL17A1Q9UMD9 1497 aaPredicted RBP15.03■□□□□ -0
CHD2-212ENST00000627622 CTTNBP2Q8WZ74 1663 aa15.02□□□□□ -0.01
CHD2-212ENST00000627622 ADGRL1O94910 1474 aa15.01□□□□□ -0.01
CHD2-212ENST00000627622 WDR7Q9Y4E6 1490 aa14.98□□□□□ -0.01
CHD2-212ENST00000627622 CFAP43Q8NDM7 1665 aa14.95□□□□□ -0.02
CHD2-212ENST00000627622 GOLGA3Q08378 1498 aa14.94□□□□□ -0.02
CHD2-212ENST00000627622 ABCA8O94911 1581 aa14.93□□□□□ -0.02
CHD2-212ENST00000627622 MAGI3Q5TCQ9 1506 aa14.91□□□□□ -0.02
CHD2-212ENST00000627622 CD109Q6YHK3 1445 aa14.91□□□□□ -0.02
CHD2-212ENST00000627622 ILDR1Q86SU0 546 aaPredicted RBP14.9□□□□□ -0.02
CHD2-212ENST00000627622 KCNH8Q96L42 1107 aa14.9□□□□□ -0.02
CHD2-212ENST00000627622 HECW2Q9P2P5 1572 aa14.88□□□□□ -0.03
CHD2-212ENST00000627622 PRXQ9BXM0 1461 aa14.87□□□□□ -0.03
CHD2-212ENST00000627622 FAM9AQ8IZU1 332 aaPredicted RBP14.83□□□□□ -0.03
CHD2-212ENST00000627622 KIF21BO75037 1637 aa14.82□□□□□ -0.04
CHD2-212ENST00000627622 ARAP3Q8WWN8 1544 aa14.81□□□□□ -0.04
CHD2-212ENST00000627622 ATP10BO94823 1461 aa14.8□□□□□ -0.04
CHD2-212ENST00000627622 P3H3Q8IVL6 736 aa14.79□□□□□ -0.04
CHD2-212ENST00000627622 ARID3CA6NKF2 412 aa14.78□□□□□ -0.04
CHD2-212ENST00000627622 ABCA9Q8IUA7 1624 aa14.78□□□□□ -0.04
CHD2-212ENST00000627622 PHLDB1Q86UU1 1377 aa14.76□□□□□ -0.05
CHD2-212ENST00000627622 SAMD9Q5K651 1589 aa14.76□□□□□ -0.05
CHD2-212ENST00000627622 RAPGEF6Q8TEU7 1601 aa14.75□□□□□ -0.05
CHD2-212ENST00000627622 CSRNP3Q8WYN3 585 aa14.72□□□□□ -0.05
CHD2-212ENST00000627622 ADAMTSL3P82987 1691 aa14.71□□□□□ -0.05
CHD2-212ENST00000627622 NEO1Q92859 1461 aa14.71□□□□□ -0.05
CHD2-212ENST00000627622 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.69□□□□□ -0.06
CHD2-212ENST00000627622 RAPGEF3O95398 923 aa14.69□□□□□ -0.06
CHD2-212ENST00000627622 HNRNPUL2Q1KMD3 747 aaKnown RBP14.69□□□□□ -0.06
CHD2-212ENST00000627622 PTPRMP28827 1452 aa14.68□□□□□ -0.06
CHD2-212ENST00000627622 NUP153P49790 1475 aaKnown RBP14.67□□□□□ -0.06
CHD2-212ENST00000627622 BCORL1Q5H9F3 1711 aa14.67□□□□□ -0.06
CHD2-212ENST00000627622 FRMPD1Q5SYB0 1578 aa14.67□□□□□ -0.06
CHD2-212ENST00000627622 RANGAP1P46060 587 aaPredicted RBP14.63□□□□□ -0.07
CHD2-212ENST00000627622 MADDQ8WXG6 1647 aa14.63□□□□□ -0.07
CHD2-212ENST00000627622 RICTORQ6R327 1708 aa14.62□□□□□ -0.07
CHD2-212ENST00000627622 ARID4BQ4LE39 1312 aaPredicted RBP14.62□□□□□ -0.07
CHD2-212ENST00000627622 EEA1Q15075 1411 aa14.62□□□□□ -0.07
CHD2-212ENST00000627622 FHOD3Q2V2M9 1422 aa14.62□□□□□ -0.07
CHD2-212ENST00000627622 PLEKHD1A6NEE1 506 aa14.62□□□□□ -0.07
CHD2-212ENST00000627622 CFAP74Q9C0B2 1584 aa14.61□□□□□ -0.07
CHD2-212ENST00000627622 DENND4BO75064 1496 aaPredicted RBP14.6□□□□□ -0.07
CHD2-212ENST00000627622 FBXO41Q8TF61 875 aa14.6□□□□□ -0.07
CHD2-212ENST00000627622 ARHGEF40Q8TER5 1519 aa14.6□□□□□ -0.07
CHD2-212ENST00000627622 AKNAQ7Z591 1439 aa14.59□□□□□ -0.07
CHD2-212ENST00000627622 RIMS1Q86UR5 1692 aaKnown RBP14.59□□□□□ -0.07
CHD2-212ENST00000627622 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.58□□□□□ -0.07
CHD2-212ENST00000627622 PCF11O94913 1555 aaKnown RBP14.58□□□□□ -0.08
CHD2-212ENST00000627622 FANCAO15360 1455 aa14.58□□□□□ -0.08
CHD2-212ENST00000627622 EFCAB5A4FU69 1503 aa14.57□□□□□ -0.08
CHD2-212ENST00000627622 TTC37Q6PGP7 1564 aa14.56□□□□□ -0.08
CHD2-212ENST00000627622 LMTK3Q96Q04 1460 aa14.55□□□□□ -0.08
CHD2-212ENST00000627622 ZMYM4Q5VZL5 1548 aa14.54□□□□□ -0.08
CHD2-212ENST00000627622 SIGLEC1Q9BZZ2 1709 aa14.53□□□□□ -0.08
CHD2-212ENST00000627622 POGZQ7Z3K3 1410 aa14.52□□□□□ -0.08
CHD2-212ENST00000627622 PIAS4Q8N2W9 510 aaPredicted RBP14.52□□□□□ -0.09
CHD2-212ENST00000627622 ZFYVE16Q7Z3T8 1539 aa14.52□□□□□ -0.09
CHD2-212ENST00000627622 MAGI2Q86UL8 1455 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms