RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 MYH16Q9H6N6 1097 aa17.01■□□□□ 0.31
SCN8A-209ENST00000627620 PPP1R15AO75807 674 aaPredicted RBP17■□□□□ 0.31
SCN8A-209ENST00000627620 PLEKHD1A6NEE1 506 aa17■□□□□ 0.31
SCN8A-209ENST00000627620 NBR1Q14596 966 aa17■□□□□ 0.31
SCN8A-209ENST00000627620 ZBTB7CA1YPR0 619 aa16.99■□□□□ 0.31
SCN8A-209ENST00000627620 A0A0G2JS52 829 aa16.98■□□□□ 0.31
SCN8A-209ENST00000627620 RSF1Q96T23 1441 aaPredicted RBP16.98■□□□□ 0.31
SCN8A-209ENST00000627620 PLEKHG5O94827 1062 aa16.97■□□□□ 0.31
SCN8A-209ENST00000627620 C14orf37Q86TY3 774 aa16.97■□□□□ 0.31
SCN8A-209ENST00000627620 ARXQ96QS3 562 aa16.97■□□□□ 0.31
SCN8A-209ENST00000627620 RGL3Q3MIN7 710 aa16.96■□□□□ 0.31
SCN8A-209ENST00000627620 GOLGA3Q08378 1498 aa16.93■□□□□ 0.3
SCN8A-209ENST00000627620 CEP162Q5TB80 1403 aa16.91■□□□□ 0.3
SCN8A-209ENST00000627620 EEA1Q15075 1411 aa16.9■□□□□ 0.3
SCN8A-209ENST00000627620 CFDP1Q9UEE9 299 aaPredicted RBP16.89■□□□□ 0.29
SCN8A-209ENST00000627620 CCDC180Q9P1Z9 1646 aa16.87■□□□□ 0.29
SCN8A-209ENST00000627620 CFAP53Q96M91 514 aa16.86■□□□□ 0.29
SCN8A-209ENST00000627620 RB1CC1Q8TDY2 1594 aa16.86■□□□□ 0.29
SCN8A-209ENST00000627620 KNSTRNQ9Y448 316 aa16.85■□□□□ 0.29
SCN8A-209ENST00000627620 CDCA8Q53HL2 280 aa16.85■□□□□ 0.29
SCN8A-209ENST00000627620 WRNQ14191 1432 aaPredicted RBP eCLIP16.85■□□□□ 0.29
SCN8A-209ENST00000627620 SENP3-EIF4A1A0A087X0R7 540 aa16.84■□□□□ 0.29
SCN8A-209ENST00000627620 ARID4BQ4LE39 1312 aaPredicted RBP16.83■□□□□ 0.28
SCN8A-209ENST00000627620 CARD11Q9BXL7 1154 aa16.83■□□□□ 0.28
SCN8A-209ENST00000627620 PPM1GO15355 546 aaPredicted RBP16.82■□□□□ 0.28
SCN8A-209ENST00000627620 BECN1Q14457 450 aa16.81■□□□□ 0.28
SCN8A-209ENST00000627620 KIF27Q86VH2 1401 aa16.81■□□□□ 0.28
SCN8A-209ENST00000627620 DDRGK1Q96HY6 314 aa16.79■□□□□ 0.28
SCN8A-209ENST00000627620 BAZ1BQ9UIG0 1483 aaKnown RBP16.79■□□□□ 0.28
SCN8A-209ENST00000627620 HAP1P54257 671 aaPredicted RBP16.78■□□□□ 0.28
SCN8A-209ENST00000627620 MYO15BQ96JP2 1530 aa16.77■□□□□ 0.28
SCN8A-209ENST00000627620 NCLP19338 710 aaKnown RBP16.76■□□□□ 0.27
SCN8A-209ENST00000627620 NEUROD2Q15784 382 aa16.75■□□□□ 0.27
SCN8A-209ENST00000627620 TNIKQ9UKE5 1360 aa16.75■□□□□ 0.27
SCN8A-209ENST00000627620 CDK11BP21127 795 aaKnown RBP16.74■□□□□ 0.27
SCN8A-209ENST00000627620 GLIPR1L2Q4G1C9 344 aa16.74■□□□□ 0.27
SCN8A-209ENST00000627620 FTSJ3Q8IY81 847 aaKnown RBP16.74■□□□□ 0.27
SCN8A-209ENST00000627620 CEP164Q9UPV0 1460 aa16.74■□□□□ 0.27
SCN8A-209ENST00000627620 SUPT16HQ9Y5B9 1047 aaKnown RBP16.72■□□□□ 0.27
SCN8A-209ENST00000627620 MAPK8IP3Q9UPT6 1336 aa16.72■□□□□ 0.27
SCN8A-209ENST00000627620 GOLGA6L22H0YM25 854 aa16.72■□□□□ 0.27
SCN8A-209ENST00000627620 SIN3AQ96ST3 1273 aa16.72■□□□□ 0.27
SCN8A-209ENST00000627620 POGKQ9P215 609 aa16.72■□□□□ 0.27
SCN8A-209ENST00000627620 LAS1LQ9Y4W2 734 aaKnown RBP16.72■□□□□ 0.27
SCN8A-209ENST00000627620 NUDCQ9Y266 331 aa16.7■□□□□ 0.26
SCN8A-209ENST00000627620 CASC1Q6TDU7 716 aa16.69■□□□□ 0.26
SCN8A-209ENST00000627620 ANP32EQ9BTT0 268 aa16.68■□□□□ 0.26
SCN8A-209ENST00000627620 TNNT2P45379 298 aaPredicted RBP16.67■□□□□ 0.26
SCN8A-209ENST00000627620 LMOD2Q6P5Q4 547 aa16.67■□□□□ 0.26
SCN8A-209ENST00000627620 TRIM44Q96DX7 344 aaPredicted RBP16.66■□□□□ 0.26
SCN8A-209ENST00000627620 CC2D1BQ5T0F9 858 aaKnown RBP16.65■□□□□ 0.26
SCN8A-209ENST00000627620 CCNB3Q8WWL7 1395 aa16.64■□□□□ 0.25
SCN8A-209ENST00000627620 ERCC6Q03468 1493 aa16.64■□□□□ 0.25
SCN8A-209ENST00000627620 FRAT1Q92837 279 aaPredicted RBP16.63■□□□□ 0.25
SCN8A-209ENST00000627620 NACADO15069 1562 aa16.62■□□□□ 0.25
SCN8A-209ENST00000627620 ZRSR1Q15695 479 aaKnown RBP16.61■□□□□ 0.25
SCN8A-209ENST00000627620 U2SURPO15042 1029 aaKnown RBP16.6■□□□□ 0.25
SCN8A-209ENST00000627620 RGS3P49796 1198 aa16.6■□□□□ 0.25
SCN8A-209ENST00000627620 TPRNQ4KMQ1 711 aa16.6■□□□□ 0.25
SCN8A-209ENST00000627620 DCAF11Q8TEB1 546 aa16.59■□□□□ 0.25
SCN8A-209ENST00000627620 PPP4R2Q9NY27 417 aa16.58■□□□□ 0.25
SCN8A-209ENST00000627620 TMF1P82094 1093 aa16.57■□□□□ 0.24
SCN8A-209ENST00000627620 FHAD1B1AJZ9 1412 aa16.57■□□□□ 0.24
SCN8A-209ENST00000627620 PTMAP06454 111 aaKnown RBP16.57■□□□□ 0.24
SCN8A-209ENST00000627620 CHMP4BQ9H444 224 aaKnown RBP16.56■□□□□ 0.24
SCN8A-209ENST00000627620 EIF4G1Q04637 1599 aaKnown RBP16.54■□□□□ 0.24
SCN8A-209ENST00000627620 KANK1Q14678 1352 aa16.54■□□□□ 0.24
SCN8A-209ENST00000627620 MS4A1P11836 297 aa16.54■□□□□ 0.24
SCN8A-209ENST00000627620 PNNQ9H307 717 aaKnown RBP16.54■□□□□ 0.24
SCN8A-209ENST00000627620 CARMIL1Q5VZK9 1371 aa16.54■□□□□ 0.24
SCN8A-209ENST00000627620 OS9Q13438 667 aaPredicted RBP16.54■□□□□ 0.24
SCN8A-209ENST00000627620 NPHP1O15259 732 aa16.51■□□□□ 0.23
SCN8A-209ENST00000627620 MLECQ14165 292 aa16.5■□□□□ 0.23
SCN8A-209ENST00000627620 CUX2O14529 1486 aa16.5■□□□□ 0.23
SCN8A-209ENST00000627620 BAZ1AQ9NRL2 1556 aaPredicted RBP16.5■□□□□ 0.23
SCN8A-209ENST00000627620 SRPK2P78362 688 aaKnown RBP16.5■□□□□ 0.23
SCN8A-209ENST00000627620 TAOK2Q9UL54 1235 aa16.49■□□□□ 0.23
SCN8A-209ENST00000627620 SOX12O15370 315 aa16.48■□□□□ 0.23
SCN8A-209ENST00000627620 HDGFP51858 240 aaKnown RBP16.48■□□□□ 0.23
SCN8A-209ENST00000627620 FGD1P98174 961 aa16.47■□□□□ 0.23
SCN8A-209ENST00000627620 B4GALNT3Q6L9W6 998 aa16.47■□□□□ 0.23
SCN8A-209ENST00000627620 MORC1Q86VD1 984 aa16.47■□□□□ 0.23
SCN8A-209ENST00000627620 SAFB2Q14151 953 aaKnown RBP eCLIP16.47■□□□□ 0.23
SCN8A-209ENST00000627620 DNTTIP2Q5QJE6 756 aaKnown RBP16.47■□□□□ 0.23
SCN8A-209ENST00000627620 TULP1O00294 542 aaPredicted RBP16.46■□□□□ 0.23
SCN8A-209ENST00000627620 HSP90AB1P08238 724 aaKnown RBP16.46■□□□□ 0.23
SCN8A-209ENST00000627620 KCNJ4P48050 445 aa16.46■□□□□ 0.23
SCN8A-209ENST00000627620 TIMELESSQ9UNS1 1208 aa16.46■□□□□ 0.23
SCN8A-209ENST00000627620 SOGA1O94964 1423 aa16.45■□□□□ 0.22
SCN8A-209ENST00000627620 PLCB2Q00722 1185 aa16.43■□□□□ 0.22
SCN8A-209ENST00000627620 CECR2Q9BXF3 1484 aa16.43■□□□□ 0.22
SCN8A-209ENST00000627620 GGT6Q6P531 493 aa16.42■□□□□ 0.22
SCN8A-209ENST00000627620 NOP58Q9Y2X3 529 aaKnown RBP16.42■□□□□ 0.22
SCN8A-209ENST00000627620 HSPA5P11021 654 aaKnown RBP16.42■□□□□ 0.22
SCN8A-209ENST00000627620 TRHP20396 242 aaPredicted RBP16.42■□□□□ 0.22
SCN8A-209ENST00000627620 SETD5Q9C0A6 1442 aa16.42■□□□□ 0.22
SCN8A-209ENST00000627620 PKD2Q13563 968 aa16.42■□□□□ 0.22
SCN8A-209ENST00000627620 NAP1L2Q9ULW6 460 aaPredicted RBP16.42■□□□□ 0.22
SCN8A-209ENST00000627620 GOLGA2Q08379 1002 aa16.41■□□□□ 0.22
SCN8A-209ENST00000627620 ARHGAP35Q9NRY4 1499 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms