RNA–Protein interactions for RNA: ENST00000624846.3

CU638689.4-204, humanhuman

TSL 1 (best)

Gene CU638689.4, Length 934 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CU638689.4-204ENST00000624846 C7P10643 843 aa13.25□□□□□ -0.29
CU638689.4-204ENST00000624846 MAMSTRQ6ZN01 415 aa13.25□□□□□ -0.29
CU638689.4-204ENST00000624846 SLC39A7Q92504 469 aa13.25□□□□□ -0.29
CU638689.4-204ENST00000624846 STAG3Q9UJ98 1225 aa13.25□□□□□ -0.29
CU638689.4-204ENST00000624846 ATMINO43313 823 aaPredicted RBP13.24□□□□□ -0.29
CU638689.4-204ENST00000624846 FAM163AQ96GL9 167 aaPredicted RBP13.24□□□□□ -0.29
CU638689.4-204ENST00000624846 MS4A3Q96HJ5 214 aa13.2□□□□□ -0.3
CU638689.4-204ENST00000624846 MNX1P50219 401 aaPredicted RBP13.16□□□□□ -0.3
CU638689.4-204ENST00000624846 NPM1P06748 294 aaKnown RBP eCLIP13.14□□□□□ -0.31
CU638689.4-204ENST00000624846 SCUBE2Q9NQ36 999 aa13.13□□□□□ -0.31
CU638689.4-204ENST00000624846 ATN1P54259 1190 aaPredicted RBP13.06□□□□□ -0.32
CU638689.4-204ENST00000624846 POTEFA5A3E0 1075 aa13.05□□□□□ -0.32
CU638689.4-204ENST00000624846 CDAN1Q8IWY9 1227 aa13.03□□□□□ -0.32
CU638689.4-204ENST00000624846 DCAF8L2P0C7V8 631 aa12.94□□□□□ -0.34
CU638689.4-204ENST00000624846 BMP2KQ9NSY1 1161 aaPredicted RBP12.93□□□□□ -0.34
CU638689.4-204ENST00000624846 SPDYE4A6NLX3 237 aa12.92□□□□□ -0.34
CU638689.4-204ENST00000624846 RB1CC1Q8TDY2 1594 aa12.92□□□□□ -0.34
CU638689.4-204ENST00000624846 CCDC61Q9Y6R9 512 aa12.92□□□□□ -0.34
CU638689.4-204ENST00000624846 TSPYL2Q9H2G4 693 aaPredicted RBP12.9□□□□□ -0.34
CU638689.4-204ENST00000624846 KIF12Q96FN5 646 aa12.89□□□□□ -0.35
CU638689.4-204ENST00000624846 TRPC6Q9Y210 931 aa12.89□□□□□ -0.35
CU638689.4-204ENST00000624846 NACADO15069 1562 aa12.89□□□□□ -0.35
CU638689.4-204ENST00000624846 COLQQ9Y215 455 aaPredicted RBP12.86□□□□□ -0.35
CU638689.4-204ENST00000624846 TIE1P35590 1138 aa12.81□□□□□ -0.36
CU638689.4-204ENST00000624846 ST18O60284 1047 aa12.8□□□□□ -0.36
CU638689.4-204ENST00000624846 MYO15BQ96JP2 1530 aa12.79□□□□□ -0.36
CU638689.4-204ENST00000624846 MMRN1Q13201 1228 aa12.79□□□□□ -0.36
CU638689.4-204ENST00000624846 SEC24BO95487 1268 aa12.78□□□□□ -0.36
CU638689.4-204ENST00000624846 MAP3K13O43283 966 aa12.76□□□□□ -0.37
CU638689.4-204ENST00000624846 SPNS2Q8IVW8 549 aa12.75□□□□□ -0.37
CU638689.4-204ENST00000624846 TTLL13PA6NNM8 815 aa12.74□□□□□ -0.37
CU638689.4-204ENST00000624846 SLAIN1Q8ND83 568 aa12.71□□□□□ -0.37
CU638689.4-204ENST00000624846 ZCCHC6Q5VYS8 1495 aaKnown RBP12.71□□□□□ -0.38
CU638689.4-204ENST00000624846 IER5LQ5T953 404 aa12.68□□□□□ -0.38
CU638689.4-204ENST00000624846 DCAF1Q9Y4B6 1507 aa12.67□□□□□ -0.38
CU638689.4-204ENST00000624846 TRIM35Q9UPQ4 493 aa12.65□□□□□ -0.38
CU638689.4-204ENST00000624846 RASEFQ8IZ41 740 aa12.6□□□□□ -0.39
CU638689.4-204ENST00000624846 CSRNP3Q8WYN3 585 aa12.6□□□□□ -0.39
CU638689.4-204ENST00000624846 TMEM121BQ9BXQ6 578 aaPredicted RBP12.58□□□□□ -0.4
CU638689.4-204ENST00000624846 PROM2Q8N271 834 aa12.53□□□□□ -0.4
CU638689.4-204ENST00000624846 SGIP1Q9BQI5 828 aa12.52□□□□□ -0.41
CU638689.4-204ENST00000624846 MARVELD3Q96A59 401 aa12.5□□□□□ -0.41
CU638689.4-204ENST00000624846 PCDHB13Q9Y5F0 798 aa12.5□□□□□ -0.41
CU638689.4-204ENST00000624846 PLCG2P16885 1265 aa12.48□□□□□ -0.41
CU638689.4-204ENST00000624846 UNC13AQ9UPW8 1703 aa12.48□□□□□ -0.41
CU638689.4-204ENST00000624846 IRX5P78411 483 aaPredicted RBP12.46□□□□□ -0.41
CU638689.4-204ENST00000624846 BICRAQ9NZM4 1560 aa12.43□□□□□ -0.42
CU638689.4-204ENST00000624846 SNPHO15079 494 aa12.43□□□□□ -0.42
CU638689.4-204ENST00000624846 IFNL1Q8IU54 200 aa12.43□□□□□ -0.42
CU638689.4-204ENST00000624846 TMEM106CQ9BVX2 250 aa12.43□□□□□ -0.42
CU638689.4-204ENST00000624846 SHROOM4Q9ULL8 1493 aa12.41□□□□□ -0.42
CU638689.4-204ENST00000624846 SCRIBQ14160 1630 aa12.4□□□□□ -0.42
CU638689.4-204ENST00000624846 PLEKHG5O94827 1062 aa12.4□□□□□ -0.42
CU638689.4-204ENST00000624846 MIER1Q8N108 512 aa12.4□□□□□ -0.42
CU638689.4-204ENST00000624846 KRTAP3-3Q9BYR6 98 aa12.37□□□□□ -0.43
CU638689.4-204ENST00000624846 KRTAP3-2Q9BYR7 98 aa12.37□□□□□ -0.43
CU638689.4-204ENST00000624846 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.36□□□□□ -0.43
CU638689.4-204ENST00000624846 OCEL1Q9H607 264 aa12.35□□□□□ -0.43
CU638689.4-204ENST00000624846 POTEB3A0JP26 581 aa12.33□□□□□ -0.44
CU638689.4-204ENST00000624846 POTEBQ6S5H4 581 aa12.33□□□□□ -0.44
CU638689.4-204ENST00000624846 EMP3P54852 163 aa12.31□□□□□ -0.44
CU638689.4-204ENST00000624846 NUBP1P53384 320 aa12.29□□□□□ -0.44
CU638689.4-204ENST00000624846 HS3ST6Q96QI5 342 aa12.28□□□□□ -0.44
CU638689.4-204ENST00000624846 FAM205CA6NFA0 338 aa12.23□□□□□ -0.45
CU638689.4-204ENST00000624846 PLCD3Q8N3E9 789 aa12.19□□□□□ -0.46
CU638689.4-204ENST00000624846 FAM212AQ96EL1 285 aa12.17□□□□□ -0.46
CU638689.4-204ENST00000624846 EIF4G1Q04637 1599 aaKnown RBP12.17□□□□□ -0.46
CU638689.4-204ENST00000624846 PDCD7Q8N8D1 485 aaKnown RBP12.15□□□□□ -0.46
CU638689.4-204ENST00000624846 C3orf67Q6ZVT6 689 aa12.14□□□□□ -0.47
CU638689.4-204ENST00000624846 ZBTB47Q9UFB7 747 aaPredicted RBP12.14□□□□□ -0.47
CU638689.4-204ENST00000624846 CC2D2AQ9P2K1 1620 aa12.13□□□□□ -0.47
CU638689.4-204ENST00000624846 CECR2Q9BXF3 1484 aa12.12□□□□□ -0.47
CU638689.4-204ENST00000624846 PCDHB8Q9UN66 801 aa12.07□□□□□ -0.48
CU638689.4-204ENST00000624846 L3MBTL3Q96JM7 780 aaPredicted RBP12.06□□□□□ -0.48
CU638689.4-204ENST00000624846 PYGBP11216 843 aa12.05□□□□□ -0.48
CU638689.4-204ENST00000624846 RNF166Q96A37 237 aaPredicted RBP12.05□□□□□ -0.48
CU638689.4-204ENST00000624846 HOXB3P14651 431 aaPredicted RBP11.98□□□□□ -0.49
CU638689.4-204ENST00000624846 MKRN3Q13064 507 aaKnown RBP11.96□□□□□ -0.49
CU638689.4-204ENST00000624846 DCAF8Q5TAQ9 597 aa11.96□□□□□ -0.49
CU638689.4-204ENST00000624846 EHMT2Q96KQ7 1210 aa11.96□□□□□ -0.49
CU638689.4-204ENST00000624846 HOXB1P14653 301 aaPredicted RBP11.94□□□□□ -0.5
CU638689.4-204ENST00000624846 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.94□□□□□ -0.5
CU638689.4-204ENST00000624846 MYT1LQ9UL68 1186 aa11.93□□□□□ -0.5
CU638689.4-204ENST00000624846 GOLGA2Q08379 1002 aa11.92□□□□□ -0.5
CU638689.4-204ENST00000624846 ERBB3P21860 1342 aa11.9□□□□□ -0.5
CU638689.4-204ENST00000624846 NCAPD3P42695 1498 aa11.9□□□□□ -0.5
CU638689.4-204ENST00000624846 ILDR1Q86SU0 546 aaPredicted RBP11.9□□□□□ -0.5
CU638689.4-204ENST00000624846 BAZ1AQ9NRL2 1556 aaPredicted RBP11.89□□□□□ -0.51
CU638689.4-204ENST00000624846 DPY19L2Q6NUT2 758 aa11.87□□□□□ -0.51
CU638689.4-204ENST00000624846 SMARCA2P51531 1590 aa11.87□□□□□ -0.51
CU638689.4-204ENST00000624846 SMARCA4P51532 1647 aa11.86□□□□□ -0.51
CU638689.4-204ENST00000624846 ZNF710Q8N1W2 664 aa11.86□□□□□ -0.51
CU638689.4-204ENST00000624846 ATAD2BQ9ULI0 1458 aa11.86□□□□□ -0.51
CU638689.4-204ENST00000624846 ZNF467Q7Z7K2 595 aaPredicted RBP11.84□□□□□ -0.51
CU638689.4-204ENST00000624846 VARS2Q5ST30 1063 aaKnown RBP11.83□□□□□ -0.52
CU638689.4-204ENST00000624846 DOK7Q18PE1 504 aa11.8□□□□□ -0.52
CU638689.4-204ENST00000624846 BOLA1Q9Y3E2 137 aa11.8□□□□□ -0.52
CU638689.4-204ENST00000624846 HMGXB3Q12766 1538 aa11.8□□□□□ -0.52
CU638689.4-204ENST00000624846 BAZ1BQ9UIG0 1483 aaKnown RBP11.79□□□□□ -0.52
CU638689.4-204ENST00000624846 PSEN1P49768 467 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms