RNA–Protein interactions for RNA: ENST00000624683.1

KDM4B-212, Transcript of lysine demethylase 4B, humanhuman

Gene KDM4B, Length 5,076 nt, Biotype TEC, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-212ENST00000624683 EIF4G2P78344 907 aaKnown RBP eCLIP19.62■□□□□ 0.73
KDM4B-212ENST00000624683 TMC1Q8TDI8 760 aa19.62■□□□□ 0.73
KDM4B-212ENST00000624683 MRS2Q9HD23 443 aa19.6■□□□□ 0.73
KDM4B-212ENST00000624683 SLC24A1O60721 1099 aa19.59■□□□□ 0.73
KDM4B-212ENST00000624683 CARMIL1Q5VZK9 1371 aa19.56■□□□□ 0.72
KDM4B-212ENST00000624683 CUX2O14529 1486 aa19.56■□□□□ 0.72
KDM4B-212ENST00000624683 ABCC8Q09428 1581 aa19.55■□□□□ 0.72
KDM4B-212ENST00000624683 SALL2Q9Y467 1007 aaPredicted RBP19.55■□□□□ 0.72
KDM4B-212ENST00000624683 CFDP1Q9UEE9 299 aaPredicted RBP19.54■□□□□ 0.72
KDM4B-212ENST00000624683 KCNH8Q96L42 1107 aa19.54■□□□□ 0.72
KDM4B-212ENST00000624683 BCL11AQ9H165 835 aa19.53■□□□□ 0.72
KDM4B-212ENST00000624683 FHAD1B1AJZ9 1412 aa19.52■□□□□ 0.72
KDM4B-212ENST00000624683 SMARCA2P51531 1590 aa19.51■□□□□ 0.71
KDM4B-212ENST00000624683 SCAF1Q9H7N4 1312 aaKnown RBP19.5■□□□□ 0.71
KDM4B-212ENST00000624683 CCNB3Q8WWL7 1395 aa19.49■□□□□ 0.71
KDM4B-212ENST00000624683 NPM2Q86SE8 214 aaKnown RBP19.47■□□□□ 0.71
KDM4B-212ENST00000624683 WIZO95785 1651 aa19.47■□□□□ 0.71
KDM4B-212ENST00000624683 VPS8Q8N3P4 1428 aa19.46■□□□□ 0.71
KDM4B-212ENST00000624683 TOP2AP11388 1531 aaKnown RBP19.46■□□□□ 0.71
KDM4B-212ENST00000624683 WDR43Q15061 677 aaKnown RBP eCLIP19.46■□□□□ 0.71
KDM4B-212ENST00000624683 SIN3AQ96ST3 1273 aa19.44■□□□□ 0.7
KDM4B-212ENST00000624683 ERCC6Q03468 1493 aa19.43■□□□□ 0.7
KDM4B-212ENST00000624683 CCDC136Q96JN2 1154 aa19.43■□□□□ 0.7
KDM4B-212ENST00000624683 RGL3Q3MIN7 710 aa19.41■□□□□ 0.7
KDM4B-212ENST00000624683 PLPPR3Q6T4P5 718 aa19.39■□□□□ 0.69
KDM4B-212ENST00000624683 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.38■□□□□ 0.69
KDM4B-212ENST00000624683 EIF4G1Q04637 1599 aaKnown RBP19.36■□□□□ 0.69
KDM4B-212ENST00000624683 IRX6P78412 446 aaPredicted RBP19.34■□□□□ 0.69
KDM4B-212ENST00000624683 KANK4Q5T7N3 995 aaPredicted RBP19.33■□□□□ 0.69
KDM4B-212ENST00000624683 CARD11Q9BXL7 1154 aa19.31■□□□□ 0.68
KDM4B-212ENST00000624683 UPF2Q9HAU5 1272 aaKnown RBP19.29■□□□□ 0.68
KDM4B-212ENST00000624683 TIMELESSQ9UNS1 1208 aa19.28■□□□□ 0.68
KDM4B-212ENST00000624683 SETD5Q9C0A6 1442 aa19.27■□□□□ 0.68
KDM4B-212ENST00000624683 PDS5BQ9NTI5 1447 aa19.27■□□□□ 0.68
KDM4B-212ENST00000624683 ARHGAP35Q9NRY4 1499 aa19.26■□□□□ 0.67
KDM4B-212ENST00000624683 CDCA8Q53HL2 280 aa19.25■□□□□ 0.67
KDM4B-212ENST00000624683 ATAD2BQ9ULI0 1458 aa19.24■□□□□ 0.67
KDM4B-212ENST00000624683 SMARCA4P51532 1647 aa19.24■□□□□ 0.67
KDM4B-212ENST00000624683 ANP32BQ92688 251 aaKnown RBP19.24■□□□□ 0.67
KDM4B-212ENST00000624683 TDRD9Q8NDG6 1382 aaKnown RBP19.23■□□□□ 0.67
KDM4B-212ENST00000624683 CADPSQ9ULU8 1353 aa19.21■□□□□ 0.67
KDM4B-212ENST00000624683 SENP3Q9H4L4 574 aaPredicted RBP19.2■□□□□ 0.66
KDM4B-212ENST00000624683 KNSTRNQ9Y448 316 aa19.2■□□□□ 0.66
KDM4B-212ENST00000624683 PPP1R15AO75807 674 aaPredicted RBP19.19■□□□□ 0.66
KDM4B-212ENST00000624683 FMN1Q68DA7 1419 aa19.19■□□□□ 0.66
KDM4B-212ENST00000624683 HSP90AA1P07900 732 aaKnown RBP19.17■□□□□ 0.66
KDM4B-212ENST00000624683 RAPGEF2Q9Y4G8 1499 aa19.15■□□□□ 0.66
KDM4B-212ENST00000624683 SUPT16HQ9Y5B9 1047 aaKnown RBP19.15■□□□□ 0.66
KDM4B-212ENST00000624683 RAB3GAP2Q9H2M9 1393 aa19.14■□□□□ 0.65
KDM4B-212ENST00000624683 SENP3-EIF4A1A0A087X0R7 540 aa19.13■□□□□ 0.65
KDM4B-212ENST00000624683 CFAP53Q96M91 514 aa19.11■□□□□ 0.65
KDM4B-212ENST00000624683 CARMIL2Q6F5E8 1435 aa19.11■□□□□ 0.65
KDM4B-212ENST00000624683 DCAF11Q8TEB1 546 aa19.11■□□□□ 0.65
KDM4B-212ENST00000624683 RUSC2Q8N2Y8 1516 aa19.08■□□□□ 0.65
KDM4B-212ENST00000624683 EIF5BO60841 1220 aaKnown RBP19.06■□□□□ 0.64
KDM4B-212ENST00000624683 FHOD3Q2V2M9 1422 aa19.06■□□□□ 0.64
KDM4B-212ENST00000624683 HSPA5P11021 654 aaKnown RBP19.05■□□□□ 0.64
KDM4B-212ENST00000624683 PKD2Q13563 968 aa19.05■□□□□ 0.64
KDM4B-212ENST00000624683 CCER2I3L3R5 266 aa19.04■□□□□ 0.64
KDM4B-212ENST00000624683 FOXD1Q16676 465 aa19.03■□□□□ 0.64
KDM4B-212ENST00000624683 NBR1Q14596 966 aa19.02■□□□□ 0.64
KDM4B-212ENST00000624683 MYH16Q9H6N6 1097 aa19.02■□□□□ 0.64
KDM4B-212ENST00000624683 KANK1Q14678 1352 aa19.02■□□□□ 0.64
KDM4B-212ENST00000624683 ARID4BQ4LE39 1312 aaPredicted RBP19.02■□□□□ 0.64
KDM4B-212ENST00000624683 TMF1P82094 1093 aa19.02■□□□□ 0.64
KDM4B-212ENST00000624683 MPHOSPH9Q99550 1183 aa19.02■□□□□ 0.64
KDM4B-212ENST00000624683 CC2D1BQ5T0F9 858 aaKnown RBP19.01■□□□□ 0.63
KDM4B-212ENST00000624683 GLIPR1L2Q4G1C9 344 aa18.99■□□□□ 0.63
KDM4B-212ENST00000624683 PPP4R2Q9NY27 417 aa18.98■□□□□ 0.63
KDM4B-212ENST00000624683 POGKQ9P215 609 aa18.98■□□□□ 0.63
KDM4B-212ENST00000624683 DDRGK1Q96HY6 314 aa18.97■□□□□ 0.63
KDM4B-212ENST00000624683 C14orf37Q86TY3 774 aa18.97■□□□□ 0.63
KDM4B-212ENST00000624683 PPM1GO15355 546 aaPredicted RBP18.96■□□□□ 0.63
KDM4B-212ENST00000624683 NEUROD2Q15784 382 aa18.95■□□□□ 0.62
KDM4B-212ENST00000624683 ANKRD30AQ9BXX3 1397 aa18.95■□□□□ 0.62
KDM4B-212ENST00000624683 FANCD2Q9BXW9 1451 aa18.95■□□□□ 0.62
KDM4B-212ENST00000624683 NUDCQ9Y266 331 aa18.94■□□□□ 0.62
KDM4B-212ENST00000624683 NUP155O75694 1391 aa18.94■□□□□ 0.62
KDM4B-212ENST00000624683 ZBTB7CA1YPR0 619 aa18.93■□□□□ 0.62
KDM4B-212ENST00000624683 MAPK8IP3Q9UPT6 1336 aa18.92■□□□□ 0.62
KDM4B-212ENST00000624683 TNNT2P45379 298 aaPredicted RBP18.91■□□□□ 0.62
KDM4B-212ENST00000624683 EFCAB2Q5VUJ9 269 aa18.91■□□□□ 0.62
KDM4B-212ENST00000624683 PLEKHG5O94827 1062 aa18.89■□□□□ 0.61
KDM4B-212ENST00000624683 BECN1Q14457 450 aa18.89■□□□□ 0.61
KDM4B-212ENST00000624683 CCDC18Q5T9S5 1454 aa18.89■□□□□ 0.61
KDM4B-212ENST00000624683 ANP32EQ9BTT0 268 aa18.89■□□□□ 0.61
KDM4B-212ENST00000624683 FTSJ3Q8IY81 847 aaKnown RBP18.88■□□□□ 0.61
KDM4B-212ENST00000624683 DHX57Q6P158 1386 aaKnown RBP18.86■□□□□ 0.61
KDM4B-212ENST00000624683 L3MBTL2Q969R5 705 aa18.85■□□□□ 0.61
KDM4B-212ENST00000624683 JPH4Q96JJ6 628 aa18.85■□□□□ 0.61
KDM4B-212ENST00000624683 GGT6Q6P531 493 aa18.85■□□□□ 0.61
KDM4B-212ENST00000624683 ROCK2O75116 1388 aaKnown RBP18.83■□□□□ 0.6
KDM4B-212ENST00000624683 HNRNPMP52272 730 aaKnown RBP eCLIP18.83■□□□□ 0.6
KDM4B-212ENST00000624683 B4GALNT3Q6L9W6 998 aa18.83■□□□□ 0.6
KDM4B-212ENST00000624683 IGF1RP08069 1367 aa18.83■□□□□ 0.6
KDM4B-212ENST00000624683 U2SURPO15042 1029 aaKnown RBP18.82■□□□□ 0.6
KDM4B-212ENST00000624683 LAS1LQ9Y4W2 734 aaKnown RBP18.82■□□□□ 0.6
KDM4B-212ENST00000624683 FRAT1Q92837 279 aaPredicted RBP18.82■□□□□ 0.6
KDM4B-212ENST00000624683 KTN1Q86UP2 1357 aaKnown RBP18.82■□□□□ 0.6
KDM4B-212ENST00000624683 RSPH4AQ5TD94 716 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms