RNA–Protein interactions for RNA: ENST00000622089.4

ITSN2-213, Transcript of intersectin 2, humanhuman

TSL 5 BASIC

Gene ITSN2, Length 5,805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-213ENST00000622089 ZRSR1Q15695 479 aaKnown RBP12.19□□□□□ -0.46
ITSN2-213ENST00000622089 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.19□□□□□ -0.462e-6■■□□□ 13.2
ITSN2-213ENST00000622089 PTMAP06454 111 aaKnown RBP12.18□□□□□ -0.46
ITSN2-213ENST00000622089 CHIC2Q9UKJ5 165 aa12.18□□□□□ -0.46
ITSN2-213ENST00000622089 SCAF1Q9H7N4 1312 aaKnown RBP12.18□□□□□ -0.46
ITSN2-213ENST00000622089 RSF1Q96T23 1441 aaPredicted RBP12.18□□□□□ -0.46
ITSN2-213ENST00000622089 CDCA8Q53HL2 280 aa12.17□□□□□ -0.46
ITSN2-213ENST00000622089 MIER1Q8N108 512 aa12.17□□□□□ -0.46
ITSN2-213ENST00000622089 CFAP53Q96M91 514 aa12.17□□□□□ -0.46
ITSN2-213ENST00000622089 SCRIBQ14160 1630 aa12.17□□□□□ -0.46
ITSN2-213ENST00000622089 KDM2AQ9Y2K7 1162 aa12.15□□□□□ -0.46
ITSN2-213ENST00000622089 EEA1Q15075 1411 aa12.15□□□□□ -0.47
ITSN2-213ENST00000622089 CHMP4BQ9H444 224 aaKnown RBP12.14□□□□□ -0.47
ITSN2-213ENST00000622089 CLIP1P30622 1438 aa12.14□□□□□ -0.47
ITSN2-213ENST00000622089 GOLGA6L6A8MZA4 724 aa12.14□□□□□ -0.47
ITSN2-213ENST00000622089 IRX6P78412 446 aaPredicted RBP12.13□□□□□ -0.47
ITSN2-213ENST00000622089 DNTTIP2Q5QJE6 756 aaKnown RBP12.11□□□□□ -0.47
ITSN2-213ENST00000622089 GOLGA3Q08378 1498 aa12.1□□□□□ -0.47
ITSN2-213ENST00000622089 MS4A1P11836 297 aa12.1□□□□□ -0.47
ITSN2-213ENST00000622089 ZCCHC6Q5VYS8 1495 aaKnown RBP12.09□□□□□ -0.47
ITSN2-213ENST00000622089 CCDC180Q9P1Z9 1646 aa12.09□□□□□ -0.47
ITSN2-213ENST00000622089 PPP4R2Q9NY27 417 aa12.09□□□□□ -0.47
ITSN2-213ENST00000622089 FTSJ3Q8IY81 847 aaKnown RBP12.08□□□□□ -0.47
ITSN2-213ENST00000622089 KNSTRNQ9Y448 316 aa12.07□□□□□ -0.48
ITSN2-213ENST00000622089 NRDCO43847 1150 aa12.06□□□□□ -0.48
ITSN2-213ENST00000622089 NAP1L5Q96NT1 182 aaPredicted RBP12.06□□□□□ -0.48
ITSN2-213ENST00000622089 NOP58Q9Y2X3 529 aaKnown RBP12.06□□□□□ -0.48
ITSN2-213ENST00000622089 PPP1R15AO75807 674 aaPredicted RBP12.04□□□□□ -0.48
ITSN2-213ENST00000622089 CFAP44Q96MT7 982 aa12.04□□□□□ -0.48
ITSN2-213ENST00000622089 MAPK8IP3Q9UPT6 1336 aa12.03□□□□□ -0.48
ITSN2-213ENST00000622089 NUDCQ9Y266 331 aa12.03□□□□□ -0.48
ITSN2-213ENST00000622089 L1TD1Q5T7N2 865 aaKnown RBP12.03□□□□□ -0.48
ITSN2-213ENST00000622089 PNNQ9H307 717 aaKnown RBP12.03□□□□□ -0.48
ITSN2-213ENST00000622089 PLPPR3Q6T4P5 718 aa12.01□□□□□ -0.49
ITSN2-213ENST00000622089 HSP90AB1P08238 724 aaKnown RBP12.01□□□□□ -0.49
ITSN2-213ENST00000622089 RRP7BPQ9NSQ0 103 aa12.01□□□□□ -0.49
ITSN2-213ENST00000622089 CHAF1AQ13111 956 aaPredicted RBP12.01□□□□□ -0.49
ITSN2-213ENST00000622089 CEP162Q5TB80 1403 aa12□□□□□ -0.49
ITSN2-213ENST00000622089 SUPT16HQ9Y5B9 1047 aaKnown RBP12□□□□□ -0.49
ITSN2-213ENST00000622089 CHMP7Q8WUX9 453 aaPredicted RBP12□□□□□ -0.49
ITSN2-213ENST00000622089 PTMSP20962 102 aa11.99□□□□□ -0.49
ITSN2-213ENST00000622089 ZBTB7CA1YPR0 619 aa11.98□□□□□ -0.49
ITSN2-213ENST00000622089 PLEKHD1A6NEE1 506 aa11.98□□□□□ -0.49
ITSN2-213ENST00000622089 C14orf37Q86TY3 774 aa11.98□□□□□ -0.49
ITSN2-213ENST00000622089 CARD11Q9BXL7 1154 aa11.98□□□□□ -0.49
ITSN2-213ENST00000622089 HIRIP3Q9BW71 556 aaPredicted RBP11.98□□□□□ -0.49
ITSN2-213ENST00000622089 HSCBQ8IWL3 235 aa11.97□□□□□ -0.49
ITSN2-213ENST00000622089 LAS1LQ9Y4W2 734 aaKnown RBP11.95□□□□□ -0.5
ITSN2-213ENST00000622089 A0A0G2JS52 829 aa11.95□□□□□ -0.5
ITSN2-213ENST00000622089 MCCP23508 829 aa11.95□□□□□ -0.5
ITSN2-213ENST00000622089 CEP164Q9UPV0 1460 aa11.94□□□□□ -0.5
ITSN2-213ENST00000622089 MSNP26038 577 aaKnown RBP11.94□□□□□ -0.5
ITSN2-213ENST00000622089 TNIKQ9UKE5 1360 aa11.93□□□□□ -0.5
ITSN2-213ENST00000622089 TIMELESSQ9UNS1 1208 aa11.92□□□□□ -0.5
ITSN2-213ENST00000622089 GOLGA6L4A6NEF3 574 aa11.92□□□□□ -0.5
ITSN2-213ENST00000622089 PLCB2Q00722 1185 aa11.92□□□□□ -0.5
ITSN2-213ENST00000622089 RGS3P49796 1198 aa11.91□□□□□ -0.5
ITSN2-213ENST00000622089 FGD1P98174 961 aa11.91□□□□□ -0.5
ITSN2-213ENST00000622089 OS9Q13438 667 aaPredicted RBP11.91□□□□□ -0.5
ITSN2-213ENST00000622089 CCER2I3L3R5 266 aa11.91□□□□□ -0.5
ITSN2-213ENST00000622089 CFDP1Q9UEE9 299 aaPredicted RBP11.9□□□□□ -0.5
ITSN2-213ENST00000622089 HAP1P54257 671 aaPredicted RBP11.9□□□□□ -0.5
ITSN2-213ENST00000622089 RGL3Q3MIN7 710 aa11.9□□□□□ -0.5
ITSN2-213ENST00000622089 KIF27Q86VH2 1401 aa11.89□□□□□ -0.51
ITSN2-213ENST00000622089 KCNJ4P48050 445 aa11.89□□□□□ -0.51
ITSN2-213ENST00000622089 FRAT1Q92837 279 aaPredicted RBP11.89□□□□□ -0.51
ITSN2-213ENST00000622089 TMF1P82094 1093 aa11.88□□□□□ -0.51
ITSN2-213ENST00000622089 TPRNQ4KMQ1 711 aa11.87□□□□□ -0.51
ITSN2-213ENST00000622089 WRNQ14191 1432 aaPredicted RBP eCLIP11.86□□□□□ -0.51
ITSN2-213ENST00000622089 POGKQ9P215 609 aa11.86□□□□□ -0.51
ITSN2-213ENST00000622089 NEUROD2Q15784 382 aa11.85□□□□□ -0.51
ITSN2-213ENST00000622089 GBP4Q96PP9 640 aa11.85□□□□□ -0.51
ITSN2-213ENST00000622089 DRC7Q8IY82 874 aa11.84□□□□□ -0.51
ITSN2-213ENST00000622089 FHAD1B1AJZ9 1412 aa11.84□□□□□ -0.51
ITSN2-213ENST00000622089 KCNH8Q96L42 1107 aa11.84□□□□□ -0.51
ITSN2-213ENST00000622089 RTN4Q9NQC3 1192 aaKnown RBP11.84□□□□□ -0.51
ITSN2-213ENST00000622089 KANK1Q14678 1352 aa11.84□□□□□ -0.51
ITSN2-213ENST00000622089 RB1CC1Q8TDY2 1594 aa11.84□□□□□ -0.51
ITSN2-213ENST00000622089 DEKP35659 375 aaKnown RBP11.83□□□□□ -0.52
ITSN2-213ENST00000622089 HTATSF1O43719 755 aaKnown RBP11.83□□□□□ -0.52
ITSN2-213ENST00000622089 GOLGA2Q08379 1002 aa11.82□□□□□ -0.52
ITSN2-213ENST00000622089 CC2D1BQ5T0F9 858 aaKnown RBP11.82□□□□□ -0.52
ITSN2-213ENST00000622089 NAP1L2Q9ULW6 460 aaPredicted RBP11.82□□□□□ -0.52
ITSN2-213ENST00000622089 SYAP1Q96A49 352 aaPredicted RBP11.81□□□□□ -0.52
ITSN2-213ENST00000622089 IPO8O15397 1037 aaKnown RBP11.81□□□□□ -0.52
ITSN2-213ENST00000622089 KIAA2012Q0VF49 1180 aa11.81□□□□□ -0.52
ITSN2-213ENST00000622089 ARID4BQ4LE39 1312 aaPredicted RBP11.81□□□□□ -0.52
ITSN2-213ENST00000622089 U2SURPO15042 1029 aaKnown RBP11.81□□□□□ -0.52
ITSN2-213ENST00000622089 B4GALNT3Q6L9W6 998 aa11.8□□□□□ -0.52
ITSN2-213ENST00000622089 CCNB3Q8WWL7 1395 aa11.8□□□□□ -0.52
ITSN2-213ENST00000622089 TULP1O00294 542 aaPredicted RBP11.8□□□□□ -0.52
ITSN2-213ENST00000622089 CALD1Q05682 793 aaKnown RBP11.8□□□□□ -0.52
ITSN2-213ENST00000622089 HDGFP51858 240 aaKnown RBP11.8□□□□□ -0.52
ITSN2-213ENST00000622089 KTN1Q86UP2 1357 aaKnown RBP11.79□□□□□ -0.52
ITSN2-213ENST00000622089 MYO15BQ96JP2 1530 aa11.79□□□□□ -0.52
ITSN2-213ENST00000622089 TCERG1O14776 1098 aaKnown RBP11.78□□□□□ -0.52
ITSN2-213ENST00000622089 NPHP1O15259 732 aa11.78□□□□□ -0.52
ITSN2-213ENST00000622089 TPM4P67936 248 aa11.78□□□□□ -0.52
ITSN2-213ENST00000622089 PLEKHG5O94827 1062 aa11.77□□□□□ -0.53
ITSN2-213ENST00000622089 BAZ1BQ9UIG0 1483 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms